Dictyostelium discoideum cDNA Contig-U16708-1

Assembled

Chromosomal Location of Contig-U16708-1

Sequence Contig-U16708-1

CACATAAACG GTGAATACCT CGACTCCTAA ATCGATGAAG ACCGTAGCAA
ACTGCGATAA TTCACTTGAA TTGCAGCCTA CTGGGATAGT TGAAATGTTG
AACGCACATG ATGACATCGG TCCTTTCGGA TTAGGTGTTA TACTTGGGTG
AGAGTGGTCG TAATTTTTAG TAGATTCGGT TTAAAGAAAT TTTATTGGTT
TTTTAATACT AAATATTAAT ACTAATATAA TAAATAAATA AATAAATAAA
TATATAAATA AATAAAAAAA AAAAAAAAAA AAAAAAAAAA ACAACAAATA
ATAATAAAAA AAAAATTTAT AAATATACAT ACCATTCCTT TTGTGGTATT
AATAGCTTAA AAAATCAAAA TCTTTGTAAA TTAATATCTA TTAATAACAT
TAAAATAATA AATAATAGTT AAAAAAAAAA AAAAAAAATT TATTTTTGGA
AAAAAGGGAA ACATAAAAAA AAAAAAAAAA AAAAAAAAAA AGAAAGAAAA
TAATTATTAT TATAAAAAAT GGCGATAGAA GAA------- ---CTTTGTA
TGATCAAACT GGTACTCGTT GGACTATTCA AGCCAATTCT ATGGATAGAC
ATTTAGGAAG TTGGGAAATT GATTCTGAAA TTATCAATTG TATTAATCCA
TTATTGGTTA TGATTTTCGT ACCAATCTTT GAATATGGTA TTTATCGTCC
ATTGGAAAGA AAGAAGATTA ATTTCACACT CCTTCGTAGA ATGGGTACCC
GGTATGTTTT TGTCTGTGAT TGCATTTTAC ATTTCAGCTA TTATTCAAGT
TCATATTGAT AACTCTCCAC CAGAATCTGT ACATATCGCT TTACAAATAC
CACAATATGT TGTCTTGACT GCCGCTGAAG TTTTATTATC AATCACTGGT
TTAGAATTTG CCCTATGCAA ATTCACCACG TTCTATGAAA TCATTGGTAA
TTGCAGGTTG GTTAATTTGT GTTTCCATTG GTAATATGTT TGATGCTTTT
GTAATTGAAT TAATTGAATT ACCAGAATAT GTTTTATCAT TATTATTTGG
TTCTGTAATG TTTGTATTCA TCTTTATCTT TATCATTATT GCCTATAGAT
TCAAAGAAAT TGATCAATCA GTTTTGGATG AATTAAATGG TGATACTCCA
ATGACTGATG ATAATGCTAA TGCTAATTCC AAAGAATTAG ATGTTGTAAC
TCAAAAAGAT TTATCATCTT CTTCAAATCC AATTATTAAT AATAATAACA
ATAATAATAA C

Translated Amino Acid Sequence Contig-U16708-1

t*tvntstpksmktvancdnslelqptgivemlnahddigpfglgvilg*ews*flvdsv
*rnfigflilnintniink*inkyink*kkkkkkkknnk***kknl*iyipfllwy**lk
ksksl*iniy**h*nnk**lkkkkknlflekret*KKKKKKKKRKKIIIIIKNGDRR---

---LYDQTGTRWTIQANSMDRHLGSWEIDSEIINCINPLLVMIFVPIFEYGIYRPLERKK
INFTLLRRMGTRYVFVCDCILHFSYYSSSY**lstrictyrftntticcldcr*sfiinh
wfricpmqihhvl*nhw*lqvg*fvfplviclmll*ln*lnyqnmfyhyylvl*clyssl
slsllpidskklinqfwmn*mvilq*lmimlmlipkn*ml*lkkiyhllqiqlliiitii
i

Homology Contig-U16708-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U16708-1 (Contig-U16708-1Q) /CSM_Contig/Conti...  1417  0.0
Contig-U16709-1 (Contig-U16709-1Q) /CSM_Contig/Conti...  1374  0.0
Contig-U12091-1 (Contig-U12091-1Q) /CSM_Contig/Conti...   313  4e-85
Contig-U16602-1 (Contig-U16602-1Q) /CSM_Contig/Conti...   311  1e-84
Contig-U16499-1 (Contig-U16499-1Q) /CSM_Contig/Conti...   311  1e-84
Contig-U16445-1 (Contig-U16445-1Q) /CSM_Contig/Conti...   311  1e-84
Contig-U16438-1 (Contig-U16438-1Q) /CSM_Contig/Conti...   311  1e-84
Contig-U16382-1 (Contig-U16382-1Q) /CSM_Contig/Conti...   311  1e-84
Contig-U16366-1 (Contig-U16366-1Q) /CSM_Contig/Conti...   311  1e-84
Contig-U16328-1 (Contig-U16328-1Q) /CSM_Contig/Conti...   311  1e-84

Homology Contig-U16708-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C94372) Dictyostelium discoideum slug cDNA, clone SSK896.        644   0.0    3
(C93003) Dictyostelium discoideum slug cDNA, clone SSF437.        644   0.0    3
(C91196) Dictyostelium discoideum slug cDNA, clone SSJ806.        644   0.0    3
(C89777) Dictyostelium discoideum slug cDNA, clone SSG834.        644   0.0    4
(BJ431275) Dictyostelium discoideum cDNA clone:ddv13f16, 3' ...   644   0.0    3
(BJ430433) Dictyostelium discoideum cDNA clone:ddv7b12, 3' e...   644   0.0    3
(BJ399777) Dictyostelium discoideum cDNA clone:dds7o11, 3' e...   644   0.0    4
(BJ398139) Dictyostelium discoideum cDNA clone:dds11m04, 3' ...   644   0.0    3
(BJ377131) Dictyostelium discoideum cDNA clone:ddc22o18, 3' ...   644   0.0    3
(BJ375266) Dictyostelium discoideum cDNA clone:ddc18g03, 3' ...   644   0.0    4

Homology Contig-U16708-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC115680_27(AC115680|pid:none) Dictyostelium discoideum chromoso...   180   5e-69
CP000769_400(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, co...    59   2e-22
CP001359_4119(CP001359|pid:none) Anaeromyxobacter dehalogenans 2...    55   1e-17
BX294154_290(BX294154|pid:none) Rhodopirellula baltica SH 1 comp...    50   8e-16
CP000251_4007(CP000251|pid:none) Anaeromyxobacter dehalogenans 2...    57   8e-15
CP000113_2541(CP000113|pid:none) Myxococcus xanthus DK 1622, com...    53   4e-14
CP001131_4097(CP001131|pid:none) Anaeromyxobacter sp. K, complet...    54   5e-14
CP000444_4001(CP000444|pid:none) Shewanella sp. MR-7, complete g...    52   2e-12
CP000469_4(CP000469|pid:none) Shewanella sp. ANA-3, complete gen...    52   2e-12
AY029615_1(AY029615|pid:none) Gallus gallus peptide transporter ...    67   4e-12