Dictyostelium discoideum cDNA Contig-U16603-1

Assembled

Chromosomal Location of Contig-U16603-1

Sequence Contig-U16603-1

AACGGTGAAT ACCTCGACTC CTAAATCGAT GAAGACCGTA GCAAACTGCG
ATAATTCACT TGAATTGCAG CCTACTGGGA TAGTTGAAAT GTTGAACGCA
CATGATGACA TCGGTCCTTT CGGATTAGGT GTTATACTTG GGTGAGAGTG
GTCAAAAAAA AAGCATTGAA AAAAAATGAA CAAATCAATT TTATTATTAG
TTTTAGTAAT TGTATCAATT ATTGGTTCAA TTGACTCAAA GAAAGTATTC
AATGTTCGTA CTGATTTAAA AAAATCAATT AAAATTTAGA CATTTTGATG
ATAGTTTAGA TTATGATGCA ATCAATTATC AATGGTTCAC TCAAAGTGTT
GATCATTTTA ATCCAGCAAA CCCAACAACT TTCCAACAAA GATATTTAAT
TAATGACCAA TATTGGGATG GTACAGGTCC AGTTTTTATC ATGATTAATG
GTGAAGGTCC AATGGATATT AATACTGTAA CCCAACTTCA ATTTGTTGTT
TGGGCTAAAC AAGTTAGTGC ACTTGTTGTT TCTCTTGAAC ATCGTTATTA
TGGTGCTAGT TTTGTAACTG AAGACCTTTC ACTTGAAAAT TTACAATGGT
TAAATTCAGC ACAAGCATTA GCAGATAATG CAGTTTTTAG AAATTTTGTA
GCACAACAAT ATAATGTACC AAAAGAATCA AAATGGATTT CATTTGGTGG
TAGTTATTCA GGAGCATTAA CTTCATGGTT TAGAATTAAA TATCCACATT
TAGTTGATGC CACCATTGCA TCAAGTGCAC CAGTTAACCC AGAAGTTAAC
TTTTATCAAT ATTTGGAGAC AGTTCAAACT GCATTATTAG CATCAAAGTC
AAATGGTAAT TTATGTGTTG AAAACATTAA CATTGCAACT CAAAAAGATT
CAAGCACTCC TCAGTCAAGA TAACTATGGT GGTGTTGATC AAATGTTTAA
CCTTTGTACA CCACTTGGTA ATCAAAATGA TGTTGCCACT TTTATGCAAT
CACTTGCAGG TAATTTCATG GGTGTAGTTC AATATAACGA TGAAGAACCA
GGTCAAATCG ATATCGATTA CCTTTGCAAT ATCATGACTA ATCAATCATC
AGATCCATTG ACAAACTATA TCCAAATTTG GGATCAATAT GCTGATGGTG
AATGTGTTGA TGTTTCATAT GCTTCAATGA TCGCTCAAAA TCAAAATGTT
ACCAATGATG AAAATGCCAT TGGTGGTAGA ATGTGGTTCT ATCAAACTTG
TGTTGAATTT GGTTATTATC AATCAAGTGA TGCTCCATCT GCAAATCAAC
CATTTGGTAA TTTATTCCCA TTCCAACCAT ATCAAATTCA ACAATGTGCC
GATAGTTTTG GTATTCCAAA TATGTATCCA AACGTTAATT GGACAATCAC
TGAATATGGT GGTATTAATC CAGAACCATC CTCTGTTGAT AATACCTTAT
ATGTAAATGG TTCAAATGAT GAATGGCACA ATGCTTGCAA TCTTACCAGG
TAATGCAAAT GCTAAAAATA CTTTATACAT TATTGGTACA AGTCATTGTG
CTGATATGAT GATTCCAACT TCAGTATCAC CTCCAACTAC ATGACTCAAA
GCACAACAAA TTATTTTTAA TTCATCCAAG CTAATATTTA AAAAAAAAAA
AAAAAAAAAA AAAAAAATAA TAAAAATAAA ATTAAAATAT CCAATGTCCA
AAAAAAAAAN TAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAA

Translated Amino Acid Sequence Contig-U16603-1

ngeylds*idedrsklr*ft*iaaywds*nvert**hrsfrircytwvrvvkkkalkkne
qinfiisfsncinywfn*lkesiqcsy*fkkin*nldilmiv*immqsiingslkvliil
iqqtqqlsnkdi*lmtnigmvqvqfls*lmvkvqwilil*pnfnllfglnklvhllflln
ivimvlvl*lktfhlkiyng*iqhkh*qimqfleil*hnnimyqknqngfhlvvviqeh*
lhglelnihi*lmpplhqvhqltqkltfiniwrqfklhy*HQSQMVIYVLKTLTLQLKKI
QALLSQDNYGGVDQMFNLCTPLGNQNDVATFMQSLAGNFMGVVQYNDEEPGQIDIDYLCN
IMTNQSSDPLTNYIQIWDQYADGECVDVSYASMIAQNQNVTNDENAIGGRMWFYQTCVEF
GYYQSSDAPSANQPFGNLFPFQPYQIQQCADSFGIPNMYPNVNWTITEYGGINPEPSSVD
NTLYVNGSNDEWHNACNLTR*ckc*kyfihywykslc*yddsnfsitsnymtqsttnyf*
fiqani*kkkkkkkknnknkikisnvqkkx*kkkkkkkkkkkkkkkkk

Homology Contig-U16603-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U16603-1 (Contig-U16603-1Q) /CSM_Contig/Conti...  2859  0.0
Contig-U16602-1 (Contig-U16602-1Q) /CSM_Contig/Conti...  2181  0.0
Contig-U16708-1 (Contig-U16708-1Q) /CSM_Contig/Conti...   303  5e-82
Contig-U16499-1 (Contig-U16499-1Q) /CSM_Contig/Conti...   303  5e-82
Contig-U16478-1 (Contig-U16478-1Q) /CSM_Contig/Conti...   303  5e-82
Contig-U16445-1 (Contig-U16445-1Q) /CSM_Contig/Conti...   303  5e-82
Contig-U16438-1 (Contig-U16438-1Q) /CSM_Contig/Conti...   303  5e-82
Contig-U16430-1 (Contig-U16430-1Q) /CSM_Contig/Conti...   303  5e-82
Contig-U16419-1 (Contig-U16419-1Q) /CSM_Contig/Conti...   303  5e-82
Contig-U16382-1 (Contig-U16382-1Q) /CSM_Contig/Conti...   303  5e-82

Homology Contig-U16603-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ429352) Dictyostelium discoideum cDNA clone:ddv3o05, 3' e...  1247   0.0    2
(BJ399916) Dictyostelium discoideum cDNA clone:dds8d06, 3' e...  1223   0.0    3
(BJ372432) Dictyostelium discoideum cDNA clone:ddc12h17, 3' ...  1223   0.0    2
(BJ341446) Dictyostelium discoideum cDNA clone:dda6n17, 3' e...  1215   0.0    2
(BJ410399) Dictyostelium discoideum cDNA clone:ddv12k11, 5' ...  1211   0.0    1
(BJ361255) Dictyostelium discoideum cDNA clone:ddc16o08, 5' ...  1197   0.0    1
(BJ436238) Dictyostelium discoideum cDNA clone:ddv30b18, 3' ...  1170   0.0    4
(BJ436177) Dictyostelium discoideum cDNA clone:ddv30b12, 3' ...  1170   0.0    5
(BJ435216) Dictyostelium discoideum cDNA clone:ddv26o08, 3' ...  1170   0.0    4
(BJ433649) Dictyostelium discoideum cDNA clone:ddv22d13, 3' ...  1170   0.0    4

Homology Contig-U16603-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AE014296_1236(AE014296|pid:none) Drosophila melanogaster chromos...   153   8e-68
BC161646_1(BC161646|pid:none) Xenopus tropicalis hypothetical pr...   175   2e-66
BC133755_1(BC133755|pid:none) Xenopus laevis hypothetical LOC495...   168   6e-65
BC108759_1(BC108759|pid:none) Xenopus laevis hypothetical protei...   167   5e-64
BT080886_1(BT080886|pid:none) Caligus clemensi clone ccle-evs-50...   156   2e-56
(Q9NQE7) RecName: Full=Thymus-specific serine protease;         ...   145   1e-52
S44851(S44851)K12H4.7 protein - Caenorhabditis elegans                152   3e-52
(P34528) RecName: Full=Putative serine protease K12H4.7;        ...   152   3e-52
(Q9QXE5) RecName: Full=Thymus-specific serine protease;         ...   137   5e-49
AL021808_1(AL021808|pid:none) Human DNA sequence from clone XXba...   127   5e-47