Dictyostelium discoideum cDNA Contig-U16602-1

Assembled

Chromosomal Location of Contig-U16602-1

Sequence Contig-U16602-1

CTAGTACGTC AAACAAAACA TTTAAAATAT GTCTTTAGAT TTTAAATCTT
TAAGCATAAA CGGTGAATAC CTCGACTCCT AAATCGATGA AGACCGTAGC
AAACTGCGAT AATTCACTTG AATTGCAGCC TACTGGGATA GTTGAAATGT
TGAACGCACA TGATGACATC GGTCCTTTCG GATTAGGTGT TATACTTGGG
TGAGAGTGGT CAAAAAAAAA GCATTGAAAA AAAATGAACA AATCAATTTT
ATTATTAGTT TTAGTAATTG TATCAATTAT TGGTTCAATT GACTCAAAGA
AAGTATTCAA TGTTCGTACT GATTTAAAAA AATCAATTAA AATTTAGACA
TTTTGATGAT AGTTTAGATT ATGATGCAAT CAATTATCAA TGGTTCACTC
AAAGTGTTGA TCATTTTAAT CCAGCAAACC CAACAACTTT CCAACAAAGA
TATTTAATTA ATGACCAATA TTGGGATGGT ACAGGTCCAG TTTTTATCAT
GATTAATGGT GAAGGTCCAA TGGATATTAA TACTGTAACC CAACTTCAAT
TTGTTGTTTG GGCTAAACAA GTTAGTGCAC TTGTTGTTTC TCTTGAACAT
CGTTATTATG GTGCTAGTTT TGTAACTGAA GACCTTTCAC TTGAAAATTT
ACAATGGTTA AATTCAGCAC AAGCATTAGC AGATAATGCA GTTTTTAGAA
ATTTTGTAGC ACAACAATAT AATGTACCAA AAGAATCAAA ATGGATTTCA
TTTGGTGGTA GTTATTCAGG AGCATTAACT TCATGGTTTA GAATTAAATA
TCCACATTTA GTTGATGCCA CCATTGCATC AAGTGCACCA GTTAACCCAG
AAGTTAACTT TTATCAATAT TTGGAGACAG TTCAAACTGC ATTATTAGCA
TCAAAGTCAA ATGGTAATTT ATGTGTTGAA AACATTAACA TTGCAACTCA
AAAAGATTCA AGCACTCCTC AGTCAAGATA ACTATGGTGG TGTTGATCAA
ATGTTTAACC TTTGTACACC ACTTGGTAAT CAAAATGATG TTGCCACTTT
TATGCAATCA CTTGCAGGTA ATTTCATGGG TGTAGTTCAA TATAACGATG
AAGAACCAGG TCAAATCGAT ATCGATTACC TTTGCAATAT CATGACTAAT
CAATCATCAG ATCCATTGAC AAACTATATC CAAATTTGGG ATCAATATGC
TGATGGTGAA TGTGTTGATG TTTCATATGC TTCAATGATC GCTCAAAATC
AAAATGTTAC CAATGATGAA AATGCCATTG GTGGTAGAAT GTGGTTCTAT
CAAACTTGTG TTGAATTTGG TTATTATCAA TCAAGTGATG CTCCATCTGC
AAATC

Translated Amino Acid Sequence Contig-U16602-1

lvrqtkhlkyvfrf*ifkhkr*iprllnr*rp*qtaiihlncsllg*lkc*thmmtsvls
d*vlylgesgqkksiekk*tnqfyy*f**lyqllvqltqrkysmfvli*KNQLKFRHFDD
SLDYDAINYQWFTQSVDHFNPANPTTFQQRYLINDQYWDGTGPVFIMINGEGPMDINTVT
QLQFVVWAKQVSALVVSLEHRYYGASFVTEDLSLENLQWLNSAQALADNAVFRNFVAQQY
NVPKESKWISFGGSYSGALTSWFRIKYPHLVDATIASSAPVNPEVNFYQYLETVQTALLA
SKSNGNLCVENINIATQKDSSTPQSR*lwwc*snv*plyttw*sk*cchfyaitcr*fhg
cssi*r*rtrsnryrlplqyhd*siirsidklypnlgsic*w*mc*cficfndrskskcy
q**kchww*nvvlsnlc*iwllsik*csick

Homology Contig-U16602-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U16603-1 (Contig-U16603-1Q) /CSM_Contig/Conti...  2181  0.0
Contig-U16602-1 (Contig-U16602-1Q) /CSM_Contig/Conti...  2181  0.0
Contig-U16577-1 (Contig-U16577-1Q) /CSM_Contig/Conti...   351  2e-96
Contig-U16256-1 (Contig-U16256-1Q) /CSM_Contig/Conti...   325  1e-88
Contig-U15718-1 (Contig-U15718-1Q) /CSM_Contig/Conti...   325  1e-88
Contig-U14096-1 (Contig-U14096-1Q) /CSM_Contig/Conti...   325  1e-88
Contig-U13298-1 (Contig-U13298-1Q) /CSM_Contig/Conti...   325  1e-88
Contig-U15495-1 (Contig-U15495-1Q) /CSM_Contig/Conti...   319  6e-87
Contig-U16366-1 (Contig-U16366-1Q) /CSM_Contig/Conti...   317  3e-86
Contig-U15932-1 (Contig-U15932-1Q) /CSM_Contig/Conti...   313  4e-85

Homology Contig-U16602-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ410399) Dictyostelium discoideum cDNA clone:ddv12k11, 5' ...  1211   0.0    1
(BJ361255) Dictyostelium discoideum cDNA clone:ddc16o08, 5' ...  1197   0.0    1
(BJ410458) Dictyostelium discoideum cDNA clone:ddv12j16, 5' ...  1162   0.0    1
(AU061429) Dictyostelium discoideum slug cDNA, clone SLE223.     1146   0.0    2
(BJ411536) Dictyostelium discoideum cDNA clone:ddv4f24, 5' e...  1047   0.0    2
(BJ410980) Dictyostelium discoideum cDNA clone:ddv2g16, 5' e...  1031   0.0    2
(BJ411087) Dictyostelium discoideum cDNA clone:ddv2o23, 5' e...  1019   0.0    2
(BJ410759) Dictyostelium discoideum cDNA clone:ddv1b20, 5' e...  1019   0.0    2
(BJ386916) Dictyostelium discoideum cDNA clone:dds11h12, 5' ...  1019   0.0    2
(BJ414495) Dictyostelium discoideum cDNA clone:ddv19i12, 5' ...  1017   0.0    2

Homology Contig-U16602-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


BC161646_1(BC161646|pid:none) Xenopus tropicalis hypothetical pr...   175   1e-58
AE014296_1236(AE014296|pid:none) Drosophila melanogaster chromos...   153   1e-57
BC133755_1(BC133755|pid:none) Xenopus laevis hypothetical LOC495...   168   3e-56
BC108759_1(BC108759|pid:none) Xenopus laevis hypothetical protei...   167   3e-55
BT080886_1(BT080886|pid:none) Caligus clemensi clone ccle-evs-50...   156   9e-47
S44851(S44851)K12H4.7 protein - Caenorhabditis elegans                152   6e-46
(P34528) RecName: Full=Putative serine protease K12H4.7;        ...   152   6e-46
(Q9NQE7) RecName: Full=Thymus-specific serine protease;         ...   145   3e-45
(Q9QXE5) RecName: Full=Thymus-specific serine protease;         ...   137   7e-41
AL021808_1(AL021808|pid:none) Human DNA sequence from clone XXba...   127   1e-39