Homology Contig-U16419-1 vs Protein
Query= Contig-U16419-1 (Contig-U16419-1Q) /CSM_Contig/Contig-U16419-1Q.Seq.d
(2413 letters)
Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom... 514 e-159
(P15270) RecName: Full=Spore coat protein SP60; Flags: Precursor... 129 1e-29
(Q6TU45) RecName: Full=Probable spore coat protein sigD; AltName... 106 5e-21
X52105_1(X52105|pid:none) Dictyostelium discoideum SP60 gene for... 96 3e-18
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87... 67 4e-09
(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor; 66 7e-09
S07638(S07638;A60942;B60942) spore coat protein SP96 precursor -... 61 2e-07
(P14328) RecName: Full=Spore coat protein SP96; &AC117075_49(AC... 61 2e-07
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;... 57 3e-06
(P54704) RecName: Full=Spore coat protein SP85; AltName: Full=Ce... 51 5e-06
S72639_1(S72639|pid:none) PspB=prespore-specific gene {5' region... 51 2e-04
AF245486_1(AF245486|pid:none) Polysphondylium pallidum spore coa... 45 0.012
BC131709_1(BC131709|pid:none) Homo sapiens cysteine-rich PAK1 in... 45 0.012
AK128809_1(AK128809|pid:none) Homo sapiens cDNA FLJ45978 fis, cl... 40 0.016
T22274(T22274)hypothetical protein F46B3.9 - Caenorhabditis eleg... 42 0.027
(P15269) RecName: Full=Spore coat protein SP70; AltName: Full=Pr... 44 0.028
AL773562_2(AL773562|pid:none) Pig DNA sequence from clone PigI-6... 44 0.036
CP000497_120(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 42 0.081
(O70560) RecName: Full=Small proline-rich protein 2I; &AJ005567... 42 0.14
AY570730_1(AY570730|pid:none) Danio rerio matrilin-4-like protei... 41 0.23
(O70554) RecName: Full=Small proline-rich protein 2B; &AJ005560... 40 0.31
(P40798) RecName: Full=Protein shuttle craft; &AE014134_2656(AE... 40 0.31
BC132518_1(BC132518|pid:none) Mus musculus small proline-rich pr... 40 0.31
AE014134_2657(AE014134|pid:none) Drosophila melanogaster chromos... 40 0.31
AY788095_2(AY788095|pid:none) Sus scrofa mitochondrial associate... 40 0.40
Z81540_12(Z81540|pid:none) Caenorhabditis elegans Cosmid F46B3, ... 40 0.52
A55035(A55035;S45034) cysteine-rich protein CRP1 - earthworm (En... 39 0.68
X89960_1(X89960|pid:none) H.sapiens mRNA for mitochondrial capsu... 36 0.70
(O70557) RecName: Full=Small proline-rich protein 2F; &AJ005564... 39 0.89
AE001576_37(AE001576|pid:none) Borrelia burgdorferi B31 plasmid ... 39 0.89
AB210576_1(AB210576|pid:none) Ciona intestinalis mRNA for transc... 39 1.2
AK003998_1(AK003998|pid:none) Mus musculus 18-day embryo whole b... 39 1.2
AY901986_1(AY901986|pid:none) Xenopus laevis proprotein converta... 30 1.4
(P49901) RecName: Full=Sperm mitochondrial-associated cysteine-r... 36 1.5
EU854565_1(EU854565|pid:none) Danio rerio fibrillin 4 (fbn4) mRN... 38 1.5
AC116100_6(AC116100|pid:none) Dictyostelium discoideum chromosom... 38 1.5
(Q96RM1) RecName: Full=Small proline-rich protein 2F; S... 38 1.5
AJ698732_1(AJ698732|pid:none) Danio rerio partial mRNA for matri... 38 1.5
CR382135_726(CR382135|pid:none) Debaryomyces hansenii strain CBS... 38 2.0
AY845260_1(AY845260|pid:none) Mytilus edulis clone 2 foot protei... 38 2.0
Z81540_13(Z81540|pid:none) Caenorhabditis elegans Cosmid F46B3, ... 38 2.0
FJ380206_1(FJ380206|pid:none) Haliotis discus discus antistasin-... 38 2.0
BC147443_1(BC147443|pid:none) Mus musculus late cornified envelo... 37 2.6
(P22531) RecName: Full=Small proline-rich protein 2E; S... 37 2.6
AK091762_1(AK091762|pid:none) Homo sapiens cDNA FLJ34443 fis, cl... 37 2.6
AK003951_1(AK003951|pid:none) Mus musculus 18-day embryo whole b... 37 2.6
AK003705_1(AK003705|pid:none) Mus musculus 18-day embryo whole b... 37 2.6
AY901987_1(AY901987|pid:none) Xenopus laevis proprotein converta... 30 3.1
(Q18034) RecName: Full=Transcriptional repressor NF-X1 homolog; ... 32 3.2
AK126919_1(AK126919|pid:none) Homo sapiens cDNA FLJ44971 fis, cl... 37 3.4
T22273(T22273)hypothetical protein F46B3.14 - Caenorhabditis ele... 37 3.4
(P07225) RecName: Full=Vitamin K-dependent protein S; Flags: Pre... 37 3.4
M15036_1(M15036|pid:none) Human vitamin K-dependent plasma prote... 37 3.4
BX883044_5(BX883044|pid:none) Rattus norvegicus chromosome 20, m... 37 4.4
AL845369_7(AL845369|pid:none) Zebrafish DNA sequence from clone ... 37 4.4
(Q07954) RecName: Full=Prolow-density lipoprotein receptor-relat... 37 4.4
BC103351_1(BC103351|pid:none) Bos taurus SPARC-like 1 (hevin), m... 37 4.4
AB209498_1(AB209498|pid:none) Homo sapiens mRNA for low density ... 37 4.4
AF176515_1(AF176515|pid:none) Mus musculus EIG3 protein (Eig3) m... 37 4.4
(P59222) RecName: Full=Scavenger receptor class F member 2; AltN... 37 4.4
BC123193_1(BC123193|pid:none) Xenopus laevis follistatin-like 3 ... 37 4.4
L31380_1(L31380|pid:none) Macaca mulatta vitamin K dependent pro... 37 4.4
(Q28520) RecName: Full=Vitamin K-dependent protein S; Flags: Pre... 37 4.4
S28291(S28291)hypothetical protein ZC84.1 - Caenorhabditis elegans 36 5.8
BT046092_1(BT046092|pid:none) Salmo salar clone ssal-rgf-541-182... 36 5.8
AB041857_1(AB041857|pid:none) Ciona intestinalis mRNA for Ci-MET... 36 5.8
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ... 36 5.8
AP006527_10(AP006527|pid:none) Oryza sativa Japonica Group genom... 36 5.8
Z98877_12(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, com... 36 5.8
AC004663_1(AC004663|pid:none) Homo sapiens chromosome 19, cosmid... 36 5.8
AB209447_1(AB209447|pid:none) Homo sapiens mRNA for Notch homolo... 36 5.8
AM478090_2(AM478090|pid:none) Vitis vinifera contig VV78X122122.... 36 5.8
(P98118) RecName: Full=Vitamin K-dependent protein S; Flags: Pre... 36 7.5
AY805407_1(AY805407|pid:none) Danio rerio notch1b mRNA, complete... 36 7.5
S38819(S38819;S37238)plasma protein S - rabbit (fragment) 36 7.5
AM270369_22(AM270369|pid:none) Aspergillus niger contig An16c017... 36 7.5
AB081339_1(AB081339|pid:none) Homo sapiens KRTAP1.9 gene for ker... 36 7.5
(A8MXZ3) RecName: Full=Putative keratin-associated protein 9-2-l... 34 7.6
AL590992_2(AL590992|pid:none) Mouse DNA sequence from clone RP23... 31 9.8
AL591417_4(AL591417|pid:none) Mouse DNA sequence from clone RP23... 35 9.9
AJ416893_1(AJ416893|pid:none) Vaccinia virus A53R gene for tumou... 35 9.9
DQ121394_176(DQ121394|pid:none) Vaccinia virus strain Lister clo... 35 9.9
(Q9YH85) RecName: Full=Alpha-tectorin; Flags: Precursor; &AJ012... 35 9.9
>AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosome 2
map 5836255-5862024 strain AX4, complete sequence.
Length = 660
Score = 514 bits (1323), Expect(3) = e-159
Identities = 257/416 (61%), Positives = 265/416 (63%), Gaps = 5/416 (1%)
Frame = +1
Query: 949 CPIGHICVEDSNGVNCVPNXXXXXXXXXXXXXXXXHPDPCRDVDCPDGFHCECKDGKTAK 1128
CPIGHICVEDSNGVNCVPN HPDPCRDVDCPDGFHCECKDGKTAK
Sbjct: 220 CPIGHICVEDSNGVNCVPNGGGTSGGSSSTGTSGGHPDPCRDVDCPDGFHCECKDGKTAK 279
Query: 1129 CVXXXXXXXXXXXXXXXDPCKDVTCPDGFHCECKDGKTAKCVXXXXXXXXXXXXXXXXXX 1308
CV DPCKDVTCPDGFHCECKDGKTAKCV
Sbjct: 280 CVPSPTTGSSSTSGGHPDPCKDVTCPDGFHCECKDGKTAKCVPSPTTGSSSTSGGNTNPC 339
Query: 1309 XXVNCPDGFYCECKDGKTAKCVPSGPTQPPKPPVCSLRCPPKFMKCRFK*PKGHQCCVKG 1488
VNCPDGFYCECKDGKTAKCVPSGPTQPPKPPVCSLRCPP +CRF +GHQCCVK
Sbjct: 340 SNVNCPDGFYCECKDGKTAKCVPSGPTQPPKPPVCSLRCPPNH-ECRFN-DQGHQCCVKV 397
Query: 1489 SPMIDVPLRMSTMAHECKV*SPMGKEMLRQIPIDHHHQ---KFVH*GCPPKT*NVNLMIM 1659
D HECKV GKE + H + CPPK
Sbjct: 398 HH--DRCSLRCPHGHECKV-DHNGKECC----VRSHRPPPPEVCSLRCPPKH-ECKFDDH 449
Query: 1660 VKNXXXXXXXXXXXXXXXXXXLNVKL--DMMVQNVVSVQKDHTHHNMKNVIRDAHQGHEC 1833
K K+ D V S + H N + GHEC
Sbjct: 450 GKKCCVKIHCDEVCDLDCGRGFECKIRHDGSKCCVRSERPHPPQHEKCN--KRCPPGHEC 507
Query: 1834 KVDQHGKECCVVAHRPPPKCSLRCPPRHECRVNHFGEECCVKVHHDKCSLRCPPGHECKV 2013
KVDQHGKECCVVAHRPPPKCSLRCPPRHECRVNHFGEECCVKVHHDKCSLRCPPGHECKV
Sbjct: 508 KVDQHGKECCVVAHRPPPKCSLRCPPRHECRVNHFGEECCVKVHHDKCSLRCPPGHECKV 567
Query: 2014 DQHGKECCVVAHRPPPKCSLRCPPKHECRINHFGEECCVKSRNDCLTCEDLEL*KK 2181
DQHGKECCVVAHRPPPKCSLRCPPKHECRINHFGEECCVKSRNDCLTCEDL +K
Sbjct: 568 DQHGKECCVVAHRPPPKCSLRCPPKHECRINHFGEECCVKSRNDCLTCEDLNCERK 623
Score = 53.1 bits (126), Expect(3) = e-159
Identities = 25/44 (56%), Positives = 25/44 (56%)
Frame = +3
Query: 816 HCPEGYHCSMVNDVATCXXXXXXXXXXXXXXXXXXXVSSCLTTL 947
HCPEGYHCSMVNDVATC VSSCLTTL
Sbjct: 176 HCPEGYHCSMVNDVATCLASTTGGTGLPGTSSSTAGVSSCLTTL 219
Score = 43.5 bits (101), Expect(3) = e-159
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +3
Query: 2205 TVPIA*SKIVVKKFPVCYSTNPLLDGGHGFI 2297
TVPI + +K PVCYS NPLLDGGHGFI
Sbjct: 631 TVPID-KENCCEKVPVCYSNNPLLDGGHGFI 660
Score = 236 bits (601), Expect = 4e-60
Identities = 106/118 (89%), Positives = 106/118 (89%)
Frame = +2
Query: 305 DCNKITNEEECHKSSECIVINYTPCCGEQKWACSKGTFDTCTYENSCYRXXXXXXXXXXX 484
DCNKITNEEECHKSSECIVINYTPCCGEQKWACSKGTFDTCTYENSCYR
Sbjct: 6 DCNKITNEEECHKSSECIVINYTPCCGEQKWACSKGTFDTCTYENSCYRNSSNNQVVEVS 65
Query: 485 XKCFNLDGFIKITTPTEYSCSDAKIKECALLGKSCSFQKNSCSNPTSCCPGESICEGL 658
KCFNLDGFIKITTPTEYSCSDAKIKECALLGKSCSFQKNSCSNPTSCCPGESICEGL
Sbjct: 66 NKCFNLDGFIKITTPTEYSCSDAKIKECALLGKSCSFQKNSCSNPTSCCPGESICEGL 123
Score = 42.7 bits (99), Expect = 0.062
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Frame = +3
Query: 1479 CKGFTHDRCSIKNVHHGP*M*SLIPNG*RNVASDPNRPPPPEVCSLRMPTKNMKCKFDDH 1658
C HD+CS++ P + + +RPPP CSLR P K+ +C+ +
Sbjct: 547 CVKVHHDKCSLRCP---PGHECKVDQHGKECCVVAHRPPPK--CSLRCPPKH-ECRINHF 600
Query: 1659 GKKCCVKIH--CDEVCDLDCGR-GFECKIRH---DGSKCC 1760
G++CCVK C DL+C R G C ++ D CC
Sbjct: 601 GEECCVKSRNDCLTCEDLNCERKGLHCAMKTVPIDKENCC 640
Score = 42.0 bits (97), Expect = 0.11
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +2
Query: 2168 NCERKGLHCAMKHCTNCIKQNCCEKV 2245
NCERKGLHCAMK K+NCCEKV
Sbjct: 619 NCERKGLHCAMK-TVPIDKENCCEKV 643
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 3,700,143,412
Number of extensions: 78741579
Number of successful extensions: 204867
Number of sequences better than 10.0: 84
Number of HSP's gapped: 202722
Number of HSP's successfully gapped: 214
Length of query: 804
Length of database: 1,061,185,681
Length adjustment: 137
Effective length of query: 667
Effective length of database: 613,408,305
Effective search space: 409143339435
Effective search space used: 409143339435
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home