Dictyostelium discoideum cDNA Contig-U16419-1

Assembled

Chromosomal Location of Contig-U16419-1

Sequence Contig-U16419-1

ATAAACGGTG AATACCTCGA CTCCTAAATC GATGAAGACC GTAGCAAACT
GCGATAATTC ACTTGAATTG CAGCCTACTG GGATAGTTGA AATGTTGAAC
GCACATGATG ACATCGGTCC TTTCGGATTA GGTGTTATAC TTGGGTGAGA
GTGGTCATTC AATTTTATTT TTAATCCAAT TCAAATTAAA AAAAAAAACA
ATAACTAACT AAGTTAAAAA TAAAAAAAAT AATAAAGGAT GTTGTTTCTA
AAAAATATTG GAGTATTTTT TATGATATTC CTTGTATCAA AATCCTATGC
GACGGATTGT AATAAAATTA CTAATGAAGA AGAATGTCAT AAATCTTCGG
AATGTATTGT TATAAATTAT ACACCATGTT GTGGTGAACA AAAATGGGCT
TGCTCTAAAG GTACATTTGA TACTTGTACA TATGAAAATA GTTGTTATAG
AAATTCATCC AATAACCAAG TTGTTGAAGT ATCAAATAAA TGCTTCAATC
TTGATGGATT TATTAAAATT ACAACTCCAA CCGAGTATTC TTGTTCTGAT
GCCAAGATTA AAGAATGTGC CTTATTAGGT AAATCATGTA GTTTCCAAAA
GAACTCTTGT TCAAATCCAA CTTCCTGTTG CCCAGGTGAA TCAATTTGTG
AAGGTTTAAG CTCTGGTAGT TCAACATCTG GTGGTGGTTC ATCAGGTGGT
ACATCAGGTG GGTAGTTCAT CAGGTGGTAC ATCAGGTGGT AGTTCATCAG
GTGGTACATC AGGTAGTTCA TCAAGTGGTA GTTCATCAGG TGGTGTAAGT
TCATGTTCAA CTACACATTG TCCAGAAGGT TATCATTGTT CAATGGTAAA
TGATGTTGCA ACTTGTCTTG CATCAACAAC TGGTGGAACA GGTTTACCAG
GAACCAGTTC ATCAACTGCT GGTGTATCAT CATGTTTAAC AACTCTTATG
TCCAATTGGA CATATTTGTG TAGAGGATAG TAATGGCGTA AATTGTGTAC
CAAATGGAGG AGGTACATCA GGCGGTAGTT CATCAACAGG TACATCAGGT
GGTCATCCAG ATCCATGTAG AGATGTTGAC TGTCCAGATG GTTTCCATTG
TGAATGTAAA GATGGTAAAA CTGCTAAATG TGTTCCAAGT CCAACAACCG
GTTCATCAAG TACATCAGGT GGTCATCCAG ATCCATGTAA AGATGTAACT
TGTCCAGATG GTTTCCATTG TGAATGTAAA GATGGTAAAA CTGCTAAATG
TGTTCCAAGT CCAACAACCG GTTCATCAAG TACATCAGGT GGTAACACTA
ACCCATGTTC AAATGTAAAT TGTCCAGATG GTTTCTATTG TGAATGTAAA
GATGGTAAAA CTGCTAAATG TGTTCCAAGT GGTCCAACTC AACCACCAAA
ACCACCAGTT TGCTCTTTAA GATGTCCCCC CAAATTCATG AAATGTAGAT
TTAAATGACC CAAGGGTCAT CAATGCTGTG TAAAGGGTTC ACCCATGATA
GATGTTCCAT TAAGAATGTC CACCATGGCC CATGAATGTA AAGTTTGATC
CCCAATGGGT AAAGAAATGT TGCGTCAGAT CCCAATAGAC CACCACCACC
AGAAGTTTGT TCATTAAGGA TGCCCACCAA AAACATGAAA TGTAAATTTG
ATGATCATGG TAAAAAATGT TGTGTAAAGA TTCATTGTGA TGAAGTTTGT
GATTTAGATT GTGGTAGAGG TTTTGAATGT AAAATTAGAC ATGATGGTTC
AAAATGTTGT GTCCGTTCAG AAAGACCACA CCCACCACAA CATGAAAAAT
GTAATAAGAG ATGCCCACCA GGGCCATGAA TGTAAAGTTG ATCAACATGG
AAAAGAATGT TGCGTTGTTG CCCATAGACC ACCACCAAAA TGCTCTTTAA
GATGTCCACC AAGACATGAA TGTAGAGTCA ACCACTTTGG TGAAGAATGT
TGTGTTAAAG TTCACCACGA TAAATGTTCA TTGAGATGTC CACCAGGCCA
TGAATGTAAA GTTGATCAAC ATGGAAAAGA ATGTTGCGTT GTTGCCCATA
GACCACCACC AAAATGCTCA TTAAGATGTC CACCAAAACA TGAATGTAGA
ATCAATCACT TTGGTGAAGA ATGCTGTGTT AAAAGTAGAA ATGATTGTTT
AACTTGTGAA GACCTAGAAC TGTGAAAGAA AAGGTTTACA TTGTGCCATG
AAACACTGTA CCAATTGCAT AAAGCAAAAT TGTTGTGAAA AAGTTTCCAG
TATGTTATTC CACTAATCCA TTATTAGATG GTGGTCATGG TTTTATTTAA
GGAAAAAAAA AAAAAAAAAC CATTACTCAA AATAATAACT TAATTAAAAA
CTTAATAAAA ATAATTTGAT TTAAAAAAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAA

Translated Amino Acid Sequence Contig-U16419-1

ingeylds*idedrsklr*ft*iaaywds*nvert**hrsfrircytwvrvviqfyf*sn
sn*kkkq*ltklkikkiikdvvskkywsifydipcikilcdgl**ny**rrms*ifgmyc
yklytmlw*tkmgll*ryi*ylyi*k*ll*kfiq*psc*sik*mlqs*wiy*nynsnrvf
lf*cqd*rmclir*im*fpkellfksnfllpr*inl*rfklw*fniwwwfirwyirwvvh
qvvhqvvvhqvvhqvvhqvvvhqvv*vhvqlhivqkviivqw*mmlqlvlhqqlveqvyq
epvhqllvyhhv*QLLCPIGHICVEDSNGVNCVPNGGGTSGGSSSTGTSGGHPDPCRDVD
CPDGFHCECKDGKTAKCVPSPTTGSSSTSGGHPDPCKDVTCPDGFHCECKDGKTAKCVPS
PTTGSSSTSGGNTNPCSNVNCPDGFYCECKDGKTAKCVPSGPTQPPKPPVCSLRCPPKFM
KCRFK*pkghqccvkgspmidvplrmstmaheckv*spmgkemlrqipidhhhqkfvh*g
cppkt*nvnlmimvknvv*rfivmkfvi*ivvevlnvkldmmvqnvvsvqkdhthhnmkn
virdahqgheckvdqhgkeccvvahrpppkcslrcpprhecrvnhfgeeccvkvhhdkcs
lrcppgheckvdqhgkeccvvahrpppkcslrcppkhecrinhfgeeccvksrndcltce
dlel*kkrftlchetlyqlhkakll*ksfqyviplihy*mvvmvlfkekkkkkpllkiit
*lkt**k*fdlkkkkkkkkkkkkk

Homology Contig-U16419-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U16419-1 (Contig-U16419-1Q) /CSM_Contig/Conti...  4058  0.0
Contig-U13200-1 (Contig-U13200-1Q) /CSM_Contig/Conti...  1053  0.0
Contig-U15301-1 (Contig-U15301-1Q) /CSM_Contig/Conti...   710  0.0
Contig-U14678-1 (Contig-U14678-1Q) /CSM_Contig/Conti...   620  e-177
Contig-U15541-1 (Contig-U15541-1Q) /CSM_Contig/Conti...   317  4e-86
Contig-U16445-1 (Contig-U16445-1Q) /CSM_Contig/Conti...   315  2e-85
Contig-U16256-1 (Contig-U16256-1Q) /CSM_Contig/Conti...   315  2e-85
Contig-U15579-1 (Contig-U15579-1Q) /CSM_Contig/Conti...   315  2e-85
Contig-U15306-1 (Contig-U15306-1Q) /CSM_Contig/Conti...   315  2e-85
Contig-U12091-1 (Contig-U12091-1Q) /CSM_Contig/Conti...   315  2e-85

Homology Contig-U16419-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(U25144) Dictyostelium discoideum spore coat protein SP87 (P...   957   0.0    13
(BJ373133) Dictyostelium discoideum cDNA clone:ddc15i22, 3' ...   957   0.0    9
(BJ390859) Dictyostelium discoideum cDNA clone:dds14b01, 5' ...   912   0.0    8
(BJ347645) Dictyostelium discoideum cDNA clone:dda27p18, 3' ...   827   0.0    9
(BJ347199) Dictyostelium discoideum cDNA clone:dda26l07, 3' ...   821   0.0    9
(BJ400482) Dictyostelium discoideum cDNA clone:dds13o12, 3' ...   819   0.0    9
(BJ401815) Dictyostelium discoideum cDNA clone:dds19a16, 3' ...   783   0.0    9
(BJ340910) Dictyostelium discoideum cDNA clone:dda4j10, 3' e...   783   0.0    11
(BJ346846) Dictyostelium discoideum cDNA clone:dda25c09, 3' ...   781   0.0    9
(BJ402994) Dictyostelium discoideum cDNA clone:dds18o24, 3' ...   728   0.0    7

Homology Contig-U16419-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC117267_7(AC117267|pid:none) Dictyostelium discoideum chromosom...   514   e-159
(P15270) RecName: Full=Spore coat protein SP60; Flags: Precursor...   129   1e-29
(Q6TU45) RecName: Full=Probable spore coat protein sigD; AltName...   106   5e-21
X52105_1(X52105|pid:none) Dictyostelium discoideum SP60 gene for...    96   3e-18
D13973_1(D13973|pid:none) Dictyostelium discoideum gene for Dp87...    67   4e-09
(Q04503) RecName: Full=Prespore protein Dp87; Flags: Precursor;        66   7e-09
S07638(S07638;A60942;B60942) spore coat protein SP96 precursor -...    61   2e-07
(P14328) RecName: Full=Spore coat protein SP96;  &AC117075_49(AC...    61   2e-07
(Q54QX2) RecName: Full=Probable spore coat protein DDB_G0283555;...    57   3e-06
(P54704) RecName: Full=Spore coat protein SP85; AltName: Full=Ce...    51   5e-06