Dictyostelium discoideum cDNA Contig-U16382-1

Assembled

Chromosomal Location of Contig-U16382-1

NO HIT FOUND.

Sequence Contig-U16382-1

CATAAACGGT GAATACCTCG ACTCCTAAAT CGATGAAGAC CGTAGCAAAC
TGCGATAATT CACTTGAATT GCAGCCTACT GGGATAGTTG AAATGTTGAA
CGCACATGAT GACATCGGTC CTTTCGGATT AGGTGTTATA CTTGGGTGAG
AGTGGTCAAC TCAAAAGCAT TTTAATTATA TTTTAATATT AAATAAATAA
ACAAATAAAA AAAAAAATAA AAAAATGGAC GGAGAAGATG TTCAAGCTTT
AGTTATCGAT AACGGTTCTG GTATGTGTAA AGCCGGTTTT GCTGGTGATG
ATGCCCCACG TGGCTGTTTT CCCATCAATT GTTGGTCGTC CAAGACACAC
TGGTGTTATG GTCGGTATGG GTCAAAAAGA CTCATATGTA GGTGATGAAG
CCCAATCAAA GAGAGGTATC TTAACCCTCA AATACCCAAT TGAACACGGT
ATCGTTACCA ACTGGGATGA TATGGAAAAA ATCTGGCATC ATACCTTCTA
CAATGAACTC CGTGTTGCCC CAGAAGAACA CCCAGTTCTC TTAACTGAAG
CCCCATTAAA TCCAAAGGCC AACAGAGAAA AAATGACCCA AATTATGTTT
GAAACTTTCA ACACCCCAGC CATGTACGTC GCCCATTCAA GCCGTCTTAT
CCTTATATGC CTCTGGTCGT ACCACTGGGT ATCGTTATGG ATTCAGGTGA
TGGGTGGTTT CCCATACTGT ACCAATTTAC GAAGGGTTAT GCATTACCCA
CATGCTATTT TACGTTTAGA TTTAGCTGGG TCGTGATCTC ACCGATTACA
TGAGTAGATT ATTATACACT GATTGTGGTT ACTACTTTTC AACAAAAGCT
GAAAAAGAAA TAGTTAAAGA TATTAAAGAG AAATTAGCAT ATGTTGCATT
GGATTTTGAA GCTGAAATGC AAACTGCAGC CTCATCGCCT TCATTAGAGA
AATCATATAA ATTACCAGAT GGTCGAATGA TCACAATTGG TAATGAACGT
TTCCGTTGTC CAGAAGCACT TTTCCAACCA TCATTTCTTA GGTATGGAAT
CAGCTGGTAT TCATGAAACA ACCTATAATT CAATCATGAA ATGTGATGTT
GATATTCGTA AAGATTTATA TGGTAATGTT GTATTATCAG GTGGTACAAC
TACTGTTCCC AGGTATTGCT GATCGTATGA ATAAAGAATT AACTGCACGT
TGCACCATCA ACAATGAAAA TTAAAATTAT TGCACCACCA GAACGTAAAT
ACTCTGTATG GATTGGTGGT TCAATTTTAG CTTCACTGCT CAACTTTCCA
ACAAAATGTG GATCTCCAAA GAAGAATATG ACGAATCAGG TCCATCAATT
GTTACACAGA AAATGTTGGT AATTTTTTAA AAGAAAAAAA AAAAAAATAC
TATTTTTTTA ATTAAATAAG AAATATATAA ATGGTTGTTT AAAATTATTA
CCATGAATAT TATAAGAATT ACTATTTTTA AATATATAAA CTGAGATGTA
AATTAATAAA ATAATTTATT TTGCCAGAAT GTAATAATTA TATCTCACTA
ATAAAAATAT CCATATAAGG AAATATTAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAAAA BGACTAGTTC TAGATCGCGA GCGGCCGACC
ACCGCGGTGG AGCTCCAATT CGCCCTATAG TGAGTCGTAT TACGCGCA

Translated Amino Acid Sequence Contig-U16382-1

hkr*iprllnr*rp*qtaiihlncsllg*lkc*thmmtsvlsd*vlylgesgqlksilii
f*y*inkqikkkikkwtekmfkl*LSITVLVCVKPVLLVMMPHVAVFPSIVGRPRHTGVM
VGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL
LTEAPLNPKANREKMTQIMFETFNTPAMYVAHSSRLILICLWSYHWVSLWIQVMGGFPYC
TNLRRVMHYPHAILRLDLAGS*shrlhe*iiih*lwlllfnks*krns*ry*reisicci
gf*s*nancsliafireii*itrwsndhnw**tfplsrstfptiis*vwnqlvfmkqpii
qs*nvmlifvkiymvmlyyqvvqllfpgiadrmnkeltarctinnen*nycttrt*ilcm
dwwfnfsftaqlsnkmwiskeeydesgpsivtqkmlvif*kkkkkntiflik*eiykwlf
kiitmniiritifkyin*dvn**nnlfcqnviiish**kypykeilkkkkkkkkkkkkkk
xlvldrerpttavelqfal**vvlra

Homology Contig-U16382-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U16382-1 (Contig-U16382-1Q) /CSM_Contig/Conti...  2296  0.0
Contig-U15111-1 (Contig-U15111-1Q) /CSM_Contig/Conti...   829  0.0
Contig-U14951-1 (Contig-U14951-1Q) /CSM_Contig/Conti...   821  0.0
Contig-U16260-1 (Contig-U16260-1Q) /CSM_Contig/Conti...   319  7e-87
Contig-U16602-1 (Contig-U16602-1Q) /CSM_Contig/Conti...   315  1e-85
Contig-U16366-1 (Contig-U16366-1Q) /CSM_Contig/Conti...   315  1e-85
Contig-U16306-1 (Contig-U16306-1Q) /CSM_Contig/Conti...   315  1e-85
Contig-U15932-1 (Contig-U15932-1Q) /CSM_Contig/Conti...   315  1e-85
Contig-U15495-1 (Contig-U15495-1Q) /CSM_Contig/Conti...   315  1e-85
Contig-U14096-1 (Contig-U14096-1Q) /CSM_Contig/Conti...   315  1e-85

Homology Contig-U16382-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(X03281) Dictyostelium discoideum gene for actin A8.              621   0.0    15
(AU284228) Dictyostelium discoideum gamete cDNA clone:FC-AB0...   621   0.0    15
(BJ415820) Dictyostelium discoideum cDNA clone:ddv23i19, 5' ...   621   0.0    5
(DL184440) Protein expression method.                             573   0.0    16
(DL184438) Protein expression method.                             573   0.0    16
(DL073163) Expression method of recombinant protein having t...   573   0.0    16
(DL073162) Expression method of recombinant protein having t...   573   0.0    16
(M14146) D.discoideum actin 15 gene, complete cds.                573   0.0    16
(DL184439) Protein expression method.                             557   0.0    16
(DL184437) Protein expression method.                             557   0.0    16

Homology Contig-U16382-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AK304552_1(AK304552|pid:none) Homo sapiens cDNA FLJ52842 complet...   224   e-117
AJ132371_1(AJ132371|pid:none) Allogromia sp. mRNA for actin 2.        209   e-109
AF508047_1(AF508047|pid:none) Gastrostyla steinii macronuclear a...   176   8e-88
AY763403_1(AY763403|pid:none) Tretomphalus sp. B123 clone nTRE35...   172   6e-84
(Q54HE7) RecName: Full=Putative actin-28;                             158   9e-77
(Q54H30) RecName: Full=Major actin; AltName: Full=Actin-1; AltNa...   238   6e-75
(Q553U6) RecName: Full=Putative actin-22;  &AC116305_3(AC116305|...   238   6e-75
(P02576) RecName: Full=Actin, plasmodial isoform;  &ATFY(A29044;...   238   2e-74
ATDO(A93223;A92871;S67999;A03004)actin - slime mold (Dictyosteli...   238   2e-74
(Q54HE9) RecName: Full=Putative actin-27;                             157   2e-73