Dictyostelium discoideum cDNA Contig-U16313-1

Assembled

Chromosomal Location of Contig-U16313-1

Sequence Contig-U16313-1

ATAAACGGTG AATACCTCGA CTCCTAAATC GATGAAGACC GTAGCAAACT
GCGATAATTC ACTTGAATTG CAGCCTACTG GGATAGTTGA AATGTTGAAC
GCACATGATG ACATCGGTCC TTTCGGATTA GGTGTTATAC TTGGGTGAGA
GTGGTCAATA ATTATCCCTT AAAATAATAA CAATAAAATA GATTTTTACA
TTTATTTTTA TTTATTTCAT ATTTATTTTT GTTGGAAAAA AAAGAAAAAA
AAGAAAAAAA GAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAATGAGGAA
AATAATATTG ATGCTTTAAT AATTTTCAAT ATTTTTTATT TTAAAATCTG
ATTCACAAAA TACCTTGGTT TTAAATGCAT TAATTTATGA TAATACTCCA
TCAAGAAACC CAGATTTTGA AGCTTCAGGT TCCGTTGGTG TCCAAAAAAA
TTTGGTAAAA TCAGTTCTTG GTAGTGATGG AACTCCAGTT TATTGTTGTG
GTAATTCACC AAGTGCAACA ATTCATAACC AAACCACATT CCAATCATGG
TTTCACAATG TTCCAGGTGT GAATCTTCCA ATTCAAAAAG ATATCATTCT
TACACAATCT CTTTCAAATC CAAATATTTA TTCCTACAGT AATGATTCTT
ATTTTGTAAT TGATGGTCAA GGTTTTGATG ACAAATCAGT TTATCCAAAT
GAAAGAGTTT ATCGTGACGC TTTTGGAAAT CCACATAATT TCCACTTTTG
TTTACAAGCT CATACCGAAT TTCAATATAA AACTGGTGAT GTTTTTAATT
TTGCAGGTGA TGATGATGTT TGGGTATTTA TTAATAATAT TTTGGTTGTG
GATTTGGGAG GTATTCATAC AATTGCAAGT GCAAGTGTTA ACTTGGATTT
ATTGGGTTTA ACACCTGGAC AAAATTATCC ATTTGATTTC TTTTATTGTG
AACGTCACAC TGTAGAATCT CATATAAGAA TTGAAACATC TTTGGCATTC
AAGTGTCCTC GATATGATGA ATGTGGTGTC TGTGAAGGTG ATGGTACTTC
TTGTTGTACT CCAAATAATT GTGATAATAA TCCAATTTAT AGAACCAACT
GTATAACAGC AAAATGTTCA AATAATGTTT GCGTTACTTC AGCACCATAT
TGCAGTTCAA CCGAACCATG TACAGTTGGT CTTTGTACAC CAGGTGTTGG
TTGTTCAGTT GTTCCAAAAA ATTGTGTAAA TGAAAATCAT TGTACCCAAG
ATTCATGTAA TTCAACTATA AATGCTTGCC AACATGATCC AATTCCAGAT
TGTATCAATT GTGCCTATAT TGGTTGTATC ACTACTGATT ATTGTAATGA
ACAAGCTATG TTCAGCTGAT GGAAGATCAT GTGAAACTAG ACCAAAGAAT
TGTGATGATT TAAATTTTTG TACTGTTGAT ACATGTTCAA ATGGAGTTTG
CATTTACACA AAGAATTGAT AAATTGTGAA AATAGTACAG GTCCAGGTAT
TGGGTTGTAT TACTACTGAT CAATGTAATC CAAATGTATG GTTCTCCAGA
TGGGTAATTC ATGTATCATT CAACCAAAGA ATTGTTCAGA TGGTAATGCT
TGTAATGATC CATCGTGTGT TTCAGGTGGT ATGTGTATGT TAACCCCAGT
GAATTGTGAT GATGGCGATG ATTGTACTTT TGATTCATGC TCATCAACTG
GTAGGTTGCA TACATACTAA TATATCTAAT TGGGTAGAAT GTCAAAATAT
TGCTTTGTAT TACAACTGAT TTTTGTAATG TTAAGATTTG TATTAATAAT
GGTACAACAT GTGATACTGT TCCAAAAACT TGTGATGATG GTGATTCATG
TACAATAGAT TCTTGTGTCA GTCCAAGTGG TGCATGCCTA TATGAGCCAA
TAGCCAATTG TGTTAATTGT GGTGGAAATC AATGTATAAC AACTGATTTT
TGTTTACCAT TAATTTGTGG ACCTGATGGT GTTACTTGTG CTGTTGAACC
AAAGAAATGT GATGATTTTA ACCCATGTAC TTTTGATTCT TGTATTTCTC
CTCAAGGTGA TTGTGGTAAT GCACCAATTC CAGGTTGTGT AGCATGTAAT
GAAATTCTTG GATGTACTAC AACTGATCCA TGTCACCCAA TTACTTGTTC
AGCCATAGGT GATCAATGTG TGTCAACTGA TAAAGATTGT GAAGATGGAA
ATCATTGTAC AATTAACTCT TGTCAAAATA ATAATGGAAC TGCTACATGT
TTAAATTCAT TGATTACCCA TTGTACTGAT TGCCCAGGAA TTGGATGTAC
TACTACAGAT TTTTGCTTCC AACAAGTTTG CTCTGCAACT GATGGAGATG
TTTGTACAAC AGTTCCATTG AATTGTGATG ATGGCTTACA GTGTACAGTT
GATAGTTGTA TTGGACCAAT GGGTGTTTGT AGTCATATAG CTATTGCACC
AAAATGTTTA GAATGCGCAT TGGAACCATG TATTACAACA GATAATTGTC
AACCAGTTAT TTGTGGTCCA GATGGACGTT GTATCCAAGA GACAATTGAA
GATTTTTGTG ATGATTATAA TTATTGCACT GTTGATACAT GCACAGGAGT
AGGTTGTGAA CATGCTTCAA TTTCAGGTTG TCGTAATTGT ACAAATGGAA
TTGGTTGTAC AACACCATCA GATGATGCAT GTAATTTACA AGTATGTTCT
GAAACTGGAG ATAGTTGTCT TACAATGGTT TTAAAATTGT GATGATAATA
ACGATTGGTA CTGAAGATAA GTGTTTAAAT ACTGGTATTT GTCAAAAATA
ATCCAATTGA CGGGTTGTGT TACACCATCA CCAGTTTCAA TTGGTGGAAA
CTATCCCTCC AACCACTACT GGTGTATCAC AAGTTGAGTG TGATTGTTGT
CCAATTGGTC AAAAAATGTT TATTAGTCAA TGGTCATGAA ATTTGTATTA
AACCCAGCAC ACCACTGGTG GTATTCCAGA ATTAACTACT GGTTGTGCTG
GTACAACAAC TGGCAGGGCT ACAGGTCATT ACACAGAATC AGGTACAGGG
TAATCCACAT TTATGTGATA GATATCATTG TAAAAGAGGA ATGGAATGTC
ATGTTGTTAA TGGTGTTCCA GAATGTTTAC CATCAAACTA CAAATGTTTA
GATTGTTTAG ATCTTCATTG TGAGAGACAA GGTGATTTCA CCTGTTTTAT
GGTTAAAAAT CCAAATTTCA TTTCTTAGTA AAGCATAGCT TGTTATGGTG
AATCAATGTT GTAAATTGCA CACCAGTTTG CAAACCAAAA GGACACTCAC
TTTAAAAAAA ACTAAAATTA ATATATTATT TCTTTTCTTT TTATTATATA
TTTTTATTAA AATTTTATAA CCAAGTCAAC TAATTTCAAT TTAATATTAC
AATATAAACA TTAAGTTTAT TGTAAAATTT AATAATAAAT AAAAAAACAA
CTGCCCCATT TAAACATAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAA

Translated Amino Acid Sequence Contig-U16313-1

*tvntstpksmktvancdnslelqptgivemlnahddigpfglgvilg*ewsiiip*nnn
nkidfyiyfylfhiyfcwkkkkkkkkrkkkkkkkkkkmrkiilml**FSIFFILKSDSQN
TLVLNALIYDNTPSRNPDFEASGSVGVQKNLVKSVLGSDGTPVYCCGNSPSATIHNQTTF
QSWFHNVPGVNLPIQKDIILTQSLSNPNIYSYSNDSYFVIDGQGFDDKSVYPNERVYRDA
FGNPHNFHFCLQAHTEFQYKTGDVFNFAGDDDVWVFINNILVVDLGGIHTIASASVNLDL
LGLTPGQNYPFDFFYCERHTVESHIRIETSLAFKCPRYDECGVCEGDGTSCCTPNNCDNN
PIYRTNCITAKCSNNVCVTSAPYCSSTEPCTVGLCTPGVGCSVVPKNCVNENHCTQDSCN
STINACQHDPIPDCINCAYIGCITTDYCNEQAMFS*wkim*n*tkel**fkflyc*ymfk
wslhlhkelincenstgpgiglyyy*sm*skcmvlqmgnsciiqpkncsdgnacndpscv
sggmcmltpvncddgddctfdscsstgrlhty*yi*lgrmskycfvlqlifvmlrfvlim
vqhvilfqklvmmvihvq*ilvsvqvvhaymsq*pivlivveinv*qlifvyh*fvdlmv
llvllnqrnvmilthvllilvfllkvivvmhqfqvv*hvmkfldvlqlihvtqllvqp*v
invcqlikivkmeiivqltlvkiimellhv*ih*lpivliaqeldvllqifasnkfalql
memfvqqfh*ivmmaysvqlivvldqwvfvvi*llhqnv*nahwnhvlqqiivnqlfvvq
mdvvskrqlkifvmiiiiallihaqe*vvnmlqfqvvvivqmelvvqhhqmmhviykyvl
kleivvlqwf*ncddnndwy*r*vfkywylskiiqltgcvtpspvsiggnypsnhywcit
s*v*llsnwsknvy*smvmkfvlnpahhwwysrinywlcwynnwqgyrslhriryrvihi
yvidiivkeewnvmllmvfqnvyhqttnv*iv*ifivrdkvispvlwlkiqisflska*l
vmvnqccklhtslqtkrtltlkktkinilflffllyifikil*psqlisi*yyninikfi
vkfnnk*knncpi*t*kkkkkkkkk

Homology Contig-U16313-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U16313-1 (Contig-U16313-1Q) /CSM_Contig/Conti...  5925  0.0
Contig-U16312-1 (Contig-U16312-1Q) /CSM_Contig/Conti...  3455  0.0
Contig-U13128-1 (Contig-U13128-1Q) /CSM_Contig/Conti...   900  0.0
Contig-U13311-1 (Contig-U13311-1Q) /CSM_Contig/Conti...   589  e-167
Contig-U14096-1 (Contig-U14096-1Q) /CSM_Contig/Conti...   319  2e-86
Contig-U16305-1 (Contig-U16305-1Q) /CSM_Contig/Conti...   317  6e-86
Contig-U14527-1 (Contig-U14527-1Q) /CSM_Contig/Conti...   317  6e-86
Contig-U16366-1 (Contig-U16366-1Q) /CSM_Contig/Conti...   315  3e-85
Contig-U15495-1 (Contig-U15495-1Q) /CSM_Contig/Conti...   315  3e-85
Contig-U14050-1 (Contig-U14050-1Q) /CSM_Contig/Conti...   315  3e-85

Homology Contig-U16313-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU061616) Dictyostelium discoideum slug cDNA, clone SLE837.     1467   0.0    2
(BJ393648) Dictyostelium discoideum cDNA clone:dds32i02, 5' ...  1330   0.0    1
(BJ396767) Dictyostelium discoideum cDNA clone:dds43j24, 5' ...  1306   0.0    1
(BJ396774) Dictyostelium discoideum cDNA clone:dds43l22, 5' ...  1271   0.0    1
(BJ367096) Dictyostelium discoideum cDNA clone:ddc41i11, 5' ...  1261   0.0    2
(BJ371553) Dictyostelium discoideum cDNA clone:ddc58c15, 5' ...  1255   0.0    1
(BJ393169) Dictyostelium discoideum cDNA clone:dds30j10, 5' ...  1249   0.0    1
(BJ396692) Dictyostelium discoideum cDNA clone:dds43g18, 5' ...  1235   0.0    1
(BJ395038) Dictyostelium discoideum cDNA clone:dds37n10, 5' ...  1231   0.0    1
(BJ364494) Dictyostelium discoideum cDNA clone:ddc31n22, 5' ...  1231   0.0    1

Homology Contig-U16313-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54C31) RecName: Full=Protein psiR; Flags: Precursor;                889   0.0
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor;                472   0.0
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor;                315   1e-85
(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor;                314   1e-85
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                281   2e-73
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                249   5e-64
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor;                210   3e-52
(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   210   3e-52
(Q968Z6) RecName: Full=Protein psiA; AltName: Full=Prespore-cell...   205   1e-50
(Q557E9) RecName: Full=Protein psiG; Flags: Precursor;  &AC11568...   189   4e-48