Homology Contig-U15846-1 vs Protein
Query= Contig-U15846-1 (Contig-U15846-1Q) /CSM_Contig/Contig-U15846-1Q.Seq.d
(1849 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC114263_28(AC114263|pid:none) Dictyostelium discoideum chromoso... 59 5e-07
AY392438_1(AY392438|pid:none) Dictyostelium discoideum tenascin ... 39 0.001
CP000557_2523(CP000557|pid:none) Geobacillus thermodenitrificans... 44 0.015
CP000962_1769(CP000962|pid:none) Clostridium botulinum A3 str. L... 40 0.38
CP000939_1706(CP000939|pid:none) Clostridium botulinum B1 str. O... 39 0.49
CP000728_1668(CP000728|pid:none) Clostridium botulinum F str. La... 39 0.49
CP000939_412(CP000939|pid:none) Clostridium botulinum B1 str. Ok... 38 1.1
BA000043_2636(BA000043|pid:none) Geobacillus kaustophilus HTA426... 38 1.1
AM412317_1767(AM412317|pid:none) Clostridium botulinum A str. AT... 38 1.1
CP001083_1873(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 38 1.4
CP001581_394(CP001581|pid:none) Clostridium botulinum A2 str. Ky... 37 2.4
CP000246_111(CP000246|pid:none) Clostridium perfringens ATCC 131... 37 2.4
CP000728_385(CP000728|pid:none) Clostridium botulinum F str. Lan... 37 2.4
AM412317_382(AM412317|pid:none) Clostridium botulinum A str. ATC... 37 2.4
CU928158_1111(CU928158|pid:none) Escherichia fergusonii ATCC 354... 36 4.2
CP000923_989(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 36 5.5
AL445563_256(AL445563|pid:none) Mycoplasma pulmonis (strain UAB ... 27 6.6
AL844505_35(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 35 7.1
BX571662_170(BX571662|pid:none) Wolinella succinogenes, complete... 35 7.1
AL844509_625(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 28 8.0
CP000962_387(CP000962|pid:none) Clostridium botulinum A3 str. Lo... 35 9.3
BA000026_1019(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, ... 35 9.3
AE001438_3(AE001438|pid:none) Clostridium acetobutylicum ATCC 82... 35 9.3
(P10382) RecName: Full=Protein D5; &S01975(S01975) &X13273_1(X1... 35 9.3
>AC114263_28(AC114263|pid:none) Dictyostelium discoideum chromosome 2
map 215673-367476 strain AX4, complete sequence.
Length = 366
Score = 59.3 bits (142), Expect = 5e-07
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Frame = +3
Query: 1125 TNVIYKGSLSPKSNGGYIRDLPMVYNESKAYTIKEFDVSTSDLYYSNQFDKKLYSISLSN 1304
TN + S++ +N + LP+ Y+ Y EFD+S+S YYS+ F+K++Y + N
Sbjct: 249 TNNFNQSSINNNNNIKNVLQLPIFYSNKNMY---EFDISSSHFYYSDWFEKRIYRYPIRN 305
Query: 1305 -----TFGPKKTILSDLPTSFKYYNDFIYYSLNGKISRINVNTGLNEILFDSNLNKSHCI 1469
TF K+ I LP SF Y+N+++Y S I IN+N+ E + +S+
Sbjct: 306 GIIDQTF--KQMIFYYLPISFHYFNNYLYLSF-PNIYSINLNSKNVEFQLTDHFIQSNYY 362
Query: 1470 C 1472
C
Sbjct: 363 C 363
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,768,197,401
Number of extensions: 56330427
Number of successful extensions: 140743
Number of sequences better than 10.0: 24
Number of HSP's gapped: 140670
Number of HSP's successfully gapped: 30
Length of query: 616
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 481
Effective length of database: 614,245,399
Effective search space: 295452036919
Effective search space used: 295452036919
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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