Homology Contig-U15846-1 vs Protein

Query= Contig-U15846-1 (Contig-U15846-1Q) /CSM_Contig/Contig-U15846-1Q.Seq.d
         (1849 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC114263_28(AC114263|pid:none) Dictyostelium discoideum chromoso...    59   5e-07
AY392438_1(AY392438|pid:none) Dictyostelium discoideum tenascin ...    39   0.001
CP000557_2523(CP000557|pid:none) Geobacillus thermodenitrificans...    44   0.015
CP000962_1769(CP000962|pid:none) Clostridium botulinum A3 str. L...    40   0.38
CP000939_1706(CP000939|pid:none) Clostridium botulinum B1 str. O...    39   0.49
CP000728_1668(CP000728|pid:none) Clostridium botulinum F str. La...    39   0.49
CP000939_412(CP000939|pid:none) Clostridium botulinum B1 str. Ok...    38   1.1
BA000043_2636(BA000043|pid:none) Geobacillus kaustophilus HTA426...    38   1.1
AM412317_1767(AM412317|pid:none) Clostridium botulinum A str. AT...    38   1.1
CP001083_1873(CP001083|pid:none) Clostridium botulinum Ba4 str. ...    38   1.4
CP001581_394(CP001581|pid:none) Clostridium botulinum A2 str. Ky...    37   2.4
CP000246_111(CP000246|pid:none) Clostridium perfringens ATCC 131...    37   2.4
CP000728_385(CP000728|pid:none) Clostridium botulinum F str. Lan...    37   2.4
AM412317_382(AM412317|pid:none) Clostridium botulinum A str. ATC...    37   2.4
CU928158_1111(CU928158|pid:none) Escherichia fergusonii ATCC 354...    36   4.2
CP000923_989(CP000923|pid:none) Thermoanaerobacter sp. X514, com...    36   5.5
AL445563_256(AL445563|pid:none) Mycoplasma pulmonis (strain UAB ...    27   6.6
AL844505_35(AL844505|pid:none) Plasmodium falciparum 3D7 chromos...    35   7.1
BX571662_170(BX571662|pid:none) Wolinella succinogenes, complete...    35   7.1
AL844509_625(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    28   8.0
CP000962_387(CP000962|pid:none) Clostridium botulinum A3 str. Lo...    35   9.3
BA000026_1019(BA000026|pid:none) Mycoplasma penetrans HF-2 DNA, ...    35   9.3
AE001438_3(AE001438|pid:none) Clostridium acetobutylicum ATCC 82...    35   9.3
(P10382) RecName: Full=Protein D5;  &S01975(S01975) &X13273_1(X1...    35   9.3

>AC114263_28(AC114263|pid:none) Dictyostelium discoideum chromosome 2
            map 215673-367476 strain AX4, complete sequence.
          Length = 366

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
 Frame = +3

Query: 1125 TNVIYKGSLSPKSNGGYIRDLPMVYNESKAYTIKEFDVSTSDLYYSNQFDKKLYSISLSN 1304
            TN   + S++  +N   +  LP+ Y+    Y   EFD+S+S  YYS+ F+K++Y   + N
Sbjct: 249  TNNFNQSSINNNNNIKNVLQLPIFYSNKNMY---EFDISSSHFYYSDWFEKRIYRYPIRN 305

Query: 1305 -----TFGPKKTILSDLPTSFKYYNDFIYYSLNGKISRINVNTGLNEILFDSNLNKSHCI 1469
                 TF  K+ I   LP SF Y+N+++Y S    I  IN+N+   E     +  +S+
Sbjct: 306  GIIDQTF--KQMIFYYLPISFHYFNNYLYLSF-PNIYSINLNSKNVEFQLTDHFIQSNYY 362

Query: 1470 C 1472
            C
Sbjct: 363  C 363

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 2,768,197,401
Number of extensions: 56330427
Number of successful extensions: 140743
Number of sequences better than 10.0: 24
Number of HSP's gapped: 140670
Number of HSP's successfully gapped: 30
Length of query: 616
Length of database: 1,051,180,864
Length adjustment: 135
Effective length of query: 481
Effective length of database: 614,245,399
Effective search space: 295452036919
Effective search space used: 295452036919
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)




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