Dictyostelium discoideum cDNA Contig-U15846-1

Assembled

Chromosomal Location of Contig-U15846-1

NO HIT FOUND.

Sequence Contig-U15846-1

ATTCAAATGG GTCATGTGGT AATTCACCAT TTACATTATG TAAAAATAAT
GCAACATTAT TAGAGAATGG TGGACAAAGA ATTGATATAG ATAAAGAGAA
TGGTAGAATT TTATTTACAA TTAAATATAG TGATGAATTT GAACCAAGAG
TAGTTTCAGT ACCAATTCAA CCCCAGGTAA ATGAAAATGG TAATTATTTA
AAATCACAAA ATACATTATT TGGTCAAACA ACATATACAA AAGTTATTGG
TTTATTACAA TTGGTTGATT CGAAATCACA AAATATTGTT ATCGATATTG
AAAGACGTAT AGCAGGTCCA ACAAGTAATA TATTCTTTAC AAATAATACA
ATTGGAAATG AATTAACATG GAATCAAATT GGTAATTTCA TTTTCAAACA
ATCTACAAAT ACTCAATACA CATGTTGGCC ATATGCAAAT AAAATATTTA
AAGGTGAAAT TGGTAAATAT AATGATTTAG GTGAAACTTT ATATAATGGT
ATTCAAATGG GTCATGTGGT AATTCACCAT TTACATTATG TAAAAATAAT
GCAACATTAT TAGAGAATGG TGGACAAAGA ATTGATATAG ATAAAGAGAA
TGGTAGAATT TTATTTACAA TTAAATATAG TGATGAATTT GAACCAAGAG
TAGTTTCAGT ACCAATTCAA CCCCAGGTAA ATGAAAATGG TAATTATTTA
AAATCACAAA ATACATTATT TGGTCAAACA ACATATACAA AAGTTATTGG
TTTATTACAA TTGGTTGATT CGAAATCACA AAATATTGTT ATCGATATTG
AAAGACGTAT AGCAGGTCCA ACAAGTAATA TATTCTTTAC AAATAATACA
ATTGGAAATG AATTAACATG GAATCAAATT GGTAATTTCA TTTTCAAACA
ATCTACAAAT ACTCAATACA CATGTTGGCC ATATGCAAAT AAAATATTTA
AAGGTGAAAT TGGTAAATAT AATGATTTAG GTGAAACTTT ATATAATGGT
---------- GATTTAGGTG AAACTTTATA TAATGGTCCA TGTTTTGAAA
TGAAATCAAA TGGCATTAAC ACCGCCACCA CCAGTGGTAA TGATGACGGT
AGTGATTTAT ATATTTATGA TGGTACAAAT GTAATTTATA AAGGTAGCTT
AAGTCCAAAA AGTAATGGTG GATATATTCG TGATTTACCA ATGGTGTATA
ATGAAAGTAA AGCATATACA ATTAAAGAAT TTGACGTTTC AACAAGTGAT
TTATATTATT CAAATCAATT TGATAAAAAA TTATATTCAA TTTCATTATC
AAATACATTT GGACCAAAGA AAACTATTTT ATCAGATTTA CCAACTTCTT
TTAAATATTA TAATGATTTC ATTTATTATT CATTAAATGG TAAAATTTCA
AGAATTAATG TTAATACAGG TTTAAATGAA ATTTTATTTG ATTCAAATTT
AAATAAAAGT CATTGTATTT GTGCTCAAGG TTTTACGGGT GATTACATGT
GATCATTGTG ATCAATCAAA TAATTTAATA TCTTGGGTAA AAGGTATTCC
AAGATGTATA CCATTAACAA ATGATGGTAA TCCAATAACT TGTGATTTTA
ATTATCAATG TTCACCATAT AATGTTAAAA TTTGTAAAGA AATTGTTTTA
TCTGGTGGTA ATAAAGGTTG TTCAACTTGA GAGAGAGAAT AAAAATATTT
ATTTTAAATT ATTATTTATT TATTTTTTTT TTTTTAAAAA ATAAAAAAAT
TAATAATAAT AATAAACTAT TCAATAAAAA ATATAAAAAT AAAAAAATAT
AAAATATAAA ATAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAA

Translated Amino Acid Sequence Contig-U15846-1

fkwvmw*ftiyim*k*cniirewwtkn*yr*rew*nfiyn*i***i*tkssfstnstpgk
*kw*lfkitkyiiwsnniyksywfitig*feitkycyry*ktysrsnk*yilyk*ynwk*
inmesnw*fhfqtiykysihmlaick*ni*r*nw*i**fr*nfi*WYSNGSCGNSPFTLC
KNNATLLENGGQRIDIDKENGRILFTIKYSDEFEPRVVSVPIQPQVNENGNYLKSQNTLF
GQTTYTKVIGLLQLVDSKSQNIVIDIERRIAGPTSNIFFTNNTIGNELTWNQIGNFIFKQ
STNTQYTCWPYANKIFKGEIGKYNDLGETLYNG---

---DLGETLYNGPCFEMKSNGINTATTSGNDDGSDLYIYDGTNVIYKGSLSPKSNGGYIR
DLPMVYNESKAYTIKEFDVSTSDLYYSNQFDKKLYSISLSNTFGPKKTILSDLPTSFKYY
NDFIYYSLNGKISRINVNTGLNEILFDSNLNKSHCICAQGFTGDYM*sl*sik*fnilgk
ryskmytink*w*snnl*f*lsmfti*c*nl*rncfiww**rlfnlrerikifilnyylf
iffflknkkinnnnklfnkkyknkki*nik*kkkkkkkkkkk

Homology Contig-U15846-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U15846-1 (Contig-U15846-1Q) /CSM_Contig/Conti...  3301  0.0
Contig-U11516-1 (Contig-U11516-1Q) /CSM_Contig/Conti...    44  8e-04
Contig-U04577-1 (Contig-U04577-1Q) /CSM_Contig/Conti...    42  0.003
Contig-U15312-1 (Contig-U15312-1Q) /CSM_Contig/Conti...    40  0.012
Contig-U14906-1 (Contig-U14906-1Q) /CSM_Contig/Conti...    40  0.012
Contig-U12541-1 (Contig-U12541-1Q) /CSM_Contig/Conti...    40  0.012
Contig-U16426-1 (Contig-U16426-1Q) /CSM_Contig/Conti...    38  0.047
Contig-U15955-1 (Contig-U15955-1Q) /CSM_Contig/Conti...    38  0.047
Contig-U15249-1 (Contig-U15249-1Q) /CSM_Contig/Conti...    38  0.047
Contig-U13965-1 (Contig-U13965-1Q) /CSM_Contig/Conti...    38  0.047

Homology Contig-U15846-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ373010) Dictyostelium discoideum cDNA clone:ddc15f12, 3' ...   940   0.0    3
(BJ402947) Dictyostelium discoideum cDNA clone:dds18e22, 3' ...   892   0.0    2
(BJ372843) Dictyostelium discoideum cDNA clone:ddc14n08, 3' ...   839   0.0    2
(BJ373048) Dictyostelium discoideum cDNA clone:ddc15b17, 3' ...   850   0.0    2
(BJ359418) Dictyostelium discoideum cDNA clone:ddc14n08, 5' ...   303   1e-77  1
(AU051834) Dictyostelium discoideum slug cDNA, clone SSB120.      268   4e-74  3
(BJ374473) Dictyostelium discoideum cDNA clone:ddc8d04, 3' e...   246   3e-73  2
(C92230) Dictyostelium discoideum slug cDNA, clone SSD266.        262   1e-72  3
(AU072475) Dictyostelium discoideum slug cDNA, clone SSE646.      170   1e-37  1
(GR580071) CBZY2533.g1 CBZY Dictyostelium purpureum 18 hr st...    56   3e-30  8

Homology Contig-U15846-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC114263_28(AC114263|pid:none) Dictyostelium discoideum chromoso...    59   5e-07
AY392438_1(AY392438|pid:none) Dictyostelium discoideum tenascin ...    39   0.001
CP000557_2523(CP000557|pid:none) Geobacillus thermodenitrificans...    44   0.015
CP000962_1769(CP000962|pid:none) Clostridium botulinum A3 str. L...    40   0.38
CP000939_1706(CP000939|pid:none) Clostridium botulinum B1 str. O...    39   0.49
CP000728_1668(CP000728|pid:none) Clostridium botulinum F str. La...    39   0.49
CP000939_412(CP000939|pid:none) Clostridium botulinum B1 str. Ok...    38   1.1
BA000043_2636(BA000043|pid:none) Geobacillus kaustophilus HTA426...    38   1.1
AM412317_1767(AM412317|pid:none) Clostridium botulinum A str. AT...    38   1.1
CP001083_1873(CP001083|pid:none) Clostridium botulinum Ba4 str. ...    38   1.4