Homology Contig-U15784-1 vs Protein
Query= Contig-U15784-1 (Contig-U15784-1Q) /CSM_Contig/Contig-U15784-1Q.Seq.d
(4185 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC116979_92(AC116979|pid:none) Dictyostelium discoideum chromoso... 814 0.0
(Q0VFZ6) RecName: Full=Uncharacterized protein C2orf77; &BC1174... 40 0.73
AK301851_1(AK301851|pid:none) Homo sapiens cDNA FLJ59063 complet... 40 0.73
AY268943_1(AY268943|pid:none) Tetrahymena thermophila strain Cu4... 39 1.6
FM992691_96(FM992691|pid:none) Candida dubliniensis CD36 chromos... 39 2.1
(O14686) RecName: Full=Histone-lysine N-methyltransferase MLL2; ... 39 2.1
AB209494_1(AB209494|pid:none) Homo sapiens mRNA for myeloid/lymp... 39 2.1
BC094100_1(BC094100|pid:none) Xenopus laevis hypothetical protei... 38 3.6
AB002583_206(AB002583|pid:none) Cyanidioschyzon merolae chloropl... 38 3.6
FN357407_36(FN357407|pid:none) Schistosoma mansoni genome sequen... 38 3.6
AC116957_23(AC116957|pid:none) Dictyostelium discoideum chromoso... 37 4.7
(Q556J6) RecName: Full=Putative cyclin-dependent serine/threonin... 29 5.8
(Q8K9R7) RecName: Full=Protein grpE 1; AltName: Full=HSP-70 cofa... 37 6.2
CP000496_286(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 37 8.1
CP000501_81(CP000501|pid:none) Pichia stipitis CBS 6054 chromoso... 37 8.1
T18372(T18372) repeat organellar protein - Plasmodium chabaudi ... 37 8.1
AY042084_3(AY042084|pid:none) Plasmodium falciparum erythrocyte ... 37 8.1
BC152508_1(BC152508|pid:none) Danio rerio zgc:171223, mRNA (cDNA... 37 8.1
AY810474_1(AY810474|pid:none) Schistosoma japonicum SJCHGC09058 ... 37 8.1
BC135038_1(BC135038|pid:none) Danio rerio zgc:171223, mRNA (cDNA... 37 8.1
>AC116979_92(AC116979|pid:none) Dictyostelium discoideum chromosome 2
map 6445720-6776760 strain AX4, complete sequence.
Length = 1338
Score = 814 bits (2102), Expect = 0.0
Identities = 430/613 (70%), Positives = 431/613 (70%)
Frame = +1
Query: 1738 KSQQNKVGLTSPLISSTNPSNVNKSPITISIPRFKKNPNTPNMTXXXXXXXXXXXXXXXX 1917
+SQQNKVGLTSPLISSTNPSNVNKSPITISIPRFKKNPNTPNMT
Sbjct: 551 QSQQNKVGLTSPLISSTNPSNVNKSPITISIPRFKKNPNTPNMTSSQQSQQQQPPPLQQQ 610
Query: 1918 XXXXXXXXXXXXXFTSTNSGPMNGMPILPPQMMSPLSTSFQIPNQFRNKNNLFPPSPSMN 2097
FTSTNSGPMNGMPILPPQMMSPLSTSFQIPNQFRNKNNLFPPSPSMN
Sbjct: 611 QQQQQQQPSSSPSFTSTNSGPMNGMPILPPQMMSPLSTSFQIPNQFRNKNNLFPPSPSMN 670
Query: 2098 RNGARVPPSPLMSMGMNPLQHANSISGEKLNTVDEDGSKSPPTNSXXXXXXXXXXXXXXX 2277
RNGARVPPSPLMSMGMNPLQHANSISGEKLNTVDEDGSKSPPTNS
Sbjct: 671 RNGARVPPSPLMSMGMNPLQHANSISGEKLNTVDEDGSKSPPTNSQQQAQQQQQAQQQQQ 730
Query: 2278 XPHPNMVNPQFPMFPLFGMVPFNINTPISMETTFNSPFNGKFAIKGSVDFGFQIECNIMG 2457
PHPNMVNPQFPMFPLFGMVPFNINTPISMETTFNSPFNGKFAIKGSVDFGFQIECNIMG
Sbjct: 731 QPHPNMVNPQFPMFPLFGMVPFNINTPISMETTFNSPFNGKFAIKGSVDFGFQIECNIMG 790
Query: 2458 KSLKGFLGDPSTMLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2637
KSLKGFLGDPSTMLNP
Sbjct: 791 KSLKGFLGDPSTMLNPQQAAAAFQQQQHQYILQQQLLQQQQLQQHQQHQQQHHQQQQQQQ 850
Query: 2638 XXXXXXXYNPMQFFGNQVPLSPMPGKSPFLNPRRNSVSTAEGLNHQFDYPNYVNMQNWIE 2817
YNPMQFFGNQVPLSPMPGKSPFLNPRRNSVSTAEGLNHQFDYPNYVNMQNWIE
Sbjct: 851 QQQQQQQYNPMQFFGNQVPLSPMPGKSPFLNPRRNSVSTAEGLNHQFDYPNYVNMQNWIE 910
Query: 2818 SYKQWQDIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTPIQTPKNGPH 2997
SYKQWQDIV PTPIQTPKNGPH
Sbjct: 911 SYKQWQDIVQKSISQQVQQAQQQAQHQQQAQQAQQLSSSSSNKDSSTQPTPIQTPKNGPH 970
Query: 2998 IIVNSVNXXXXXXXXXXXXXXXXXXANSTPTKTSVGGSENVSDNPDFLSFKQNAFQKLEQ 3177
IIVNSVN ANSTPTKTSVGGSENVSDNPDFLSFKQNAFQKLEQ
Sbjct: 971 IIVNSVNSKKDDQQTSTSSTSSLLSANSTPTKTSVGGSENVSDNPDFLSFKQNAFQKLEQ 1030
Query: 3178 YQKIQLINLLAKQEESNNLLLETFEKDKLAAQEQSNDELVTKLQIKFKEDQEKLQQTHKE 3357
YQKIQLINLLAKQEESNNLLLETFEKDKLAAQEQSNDELVTKLQIKFKEDQEKLQQTHKE
Sbjct: 1031 YQKIQLINLLAKQEESNNLLLETFEKDKLAAQEQSNDELVTKLQIKFKEDQEKLQQTHKE 1090
Query: 3358 QKTKLDSTHQYQAIKFHNEVEKQWLIQRXXXXXXXXXXPIGSPALTXXXXXXXXXXXXXX 3537
QKTKLDSTHQYQAIKFHNEVEKQWLIQR PIGSPALT
Sbjct: 1091 QKTKLDSTHQYQAIKFHNEVEKQWLIQRNNKSSKSSLSPIGSPALTPFISPSPSPSPLLS 1150
Query: 3538 XXXXXNSPLNTPS 3576
NSPLNTPS
Sbjct: 1151 SFGIGNSPLNTPS 1163
Score = 436 bits (1122), Expect = e-120
Identities = 249/424 (58%), Positives = 249/424 (58%)
Frame = +3
Query: 324 YFELAIKEANQLYNKSKQKQYIKPIDNDERXXXXXXXXXXXXXXXXXXXXEKYXXXXXXX 503
YFELAIKEANQLYNKSKQKQYIKPIDNDER EKY
Sbjct: 80 YFELAIKEANQLYNKSKQKQYIKPIDNDERDIYIEGQDYDDDDSDQYYEDEKYNNNSNNN 139
Query: 504 XXXXXXXXXXXXXXXXXXXXXXXXDYNDYNDEIDSRTNSYRMNDNNGGEFDRKRLRDSPS 683
DYNDYNDEIDSRTNSYRMNDNNGGEFDRKRLRDSPS
Sbjct: 140 NNRNNNSNNNSKNNNNINIRNKIKDYNDYNDEIDSRTNSYRMNDNNGGEFDRKRLRDSPS 199
Query: 684 KSYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKEEHHSQPTIXXXXXXXX 863
KSYL RKEEHHSQPTI
Sbjct: 200 KSYLNNNNNNNNNNNNNNNNNNNNNNNNNNNNHHNHHHHHHRKEEHHSQPTIEEEEEEEE 259
Query: 864 XYDTNSGANGELRIDSKXXXXXXXXXXNRYIGINRXXXXXXXXXXXXXXXXXXXXXXXXX 1043
YDTNSGANGELRIDSK NRYIGINR
Sbjct: 260 EYDTNSGANGELRIDSKDEIDEDDELENRYIGINRNEDNNNNNNNNNNNKNKNINKDDDE 319
Query: 1044 XXXXXXXXXLELIPNHPVKKRKSFDGTADYDDSVQKVCEKQSQKDEENKXXXXXXXXXXX 1223
LELIPNHPVKKRKSFDGTADYDDSVQKVCEKQSQKDEENK
Sbjct: 320 EEEEEENNNLELIPNHPVKKRKSFDGTADYDDSVQKVCEKQSQKDEENKNQTSEGTNSNN 379
Query: 1224 XXXXXXXXXXXXXXAKRVLLIKPPRSPAINSRPLNKPSVIIGNQNNSSSPSITQITKPIN 1403
AKRVLLIKPPRSPAINSRPLNKPSVIIGNQNNSSSPSITQITKPIN
Sbjct: 380 SNNSNVPTSPSLSSAKRVLLIKPPRSPAINSRPLNKPSVIIGNQNNSSSPSITQITKPIN 439
Query: 1404 SPTFKSQIXXXXXXXXXNKIANMMLPSSPGMHSKIIPNNVMSALIQKKNGQSPVLLSSPN 1583
SPTFKSQI NKIANMMLPSSPGMHSKIIPNNVMSALIQKKNGQSPVLLSSPN
Sbjct: 440 SPTFKSQISSPSPLLSSNKIANMMLPSSPGMHSKIIPNNVMSALIQKKNGQSPVLLSSPN 499
Query: 1584 GMRA 1595
GMRA
Sbjct: 500 GMRA 503
Score = 82.0 bits (201), Expect(2) = 5e-20
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 3817 DIKLTIPTNSITSKDDNCIVEKDKTFEKEKDNIVNNKEI 3933
DIKLTIPTNSITSKDDNCIVEKDKTFEKEKDNIVNNKEI
Sbjct: 1244 DIKLTIPTNSITSKDDNCIVEKDKTFEKEKDNIVNNKEI 1282
Score = 42.4 bits (98), Expect(2) = 5e-20
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +2
Query: 4040 SIIQKQTKDIEMKDASLLQEV 4102
SIIQKQTKDIEMKDASLLQEV
Sbjct: 1318 SIIQKQTKDIEMKDASLLQEV 1338
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 4,077,340,988
Number of extensions: 64700522
Number of successful extensions: 185546
Number of sequences better than 10.0: 20
Number of HSP's gapped: 183583
Number of HSP's successfully gapped: 26
Length of query: 1395
Length of database: 1,051,180,864
Length adjustment: 141
Effective length of query: 1254
Effective length of database: 594,826,045
Effective search space: 745911860430
Effective search space used: 745911860430
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home