Dictyostelium discoideum cDNA Contig-U15784-1

Assembled

Chromosomal Location of Contig-U15784-1

NO HIT FOUND.

Sequence Contig-U15784-1

AACAATAATT AATTTAATAA TATAATTATA AACAAATTAT ATATAATAAC
TAGGCATCAT CATCATTATA AATCAGTTGA GTTACAACAA TAAGATAATA
ATAAAATCTT AATCATTTAA AAACTTTTAT TTATTTATTT TAAATTATTT
ATTTATTTTT TTATAATTGT TTTAATTGTG CAATAAATTT TTCAACATTG
TTTTTAATTT CTATTTATTA TTAATAAAAA TATTATTTAT TAACCAAATT
AATAAAAAAA AAAAAAAAAA TTAAAAAAAA TAAAANTAAA ATTAAAAAAA
NTAAAAAAAA AA-------- --ATATTTCG AGTTGGCAAT AAAAGAAGCA
AATCAATTAT ATAATAAGAG TAAACAAAAG CAATATATTA AACCAATTGA
TAATGATGAA AGAGATATTT ATATCGAAGG TCAAGATTAT GACGATGATG
ATAGTGATCA ATATTATGAA GATGAAAAAT ATAATAATAA TAGTAATAAT
AATAATAATA GAAATAATAA TAGTAATAAT AACTCTAAAA ATAACAATAA
TATCAACATT AGAAATAAAA TCAAAGATTA TAATGATTAT AATGATGAAA
TTGATAGTAG AACTAATTCC TATAGAATGA ATGATAATAA TGGTGGTGAA
TTTGATCGTA AAAGATTAAG AGATTCTCCT AGTAAATCAT ACTTAAACAA
CAACAACAAC AACAACAACA ACAACAACAA CAACAACAAC AACAACAACA
ACAACAACAA TAATAATAAT AATAATAATC ACCACAATCA CCATCATCAT
CACCATAGAA AAGAAGAACA TCATTCACAA CCAACCATTG AAGAAGAGGA
AGAGGAGGAA GAGGAATATG ATACTAACAG TGGCGCCAAT GGGGAATTAA
GAATTGATAG TAAAGATGAA ATTGATGAAG ATGATGAATT GGAGAATAGA
TATATTGGAA TCAATAGAAA TGAGGACAAT AATAATAACA ACAACAACAA
CAATAATAAT AAAAATAAAA ATATTAATAA AGATGATGAT GAAGAAGAAG
AGGAAGAAGA AAATAATAAC TTAGAATTGA TTCCAAATCA TCCTGTTAAA
AAGAGAAAAT CATTTGATGG TACTGCTGAT TATGACGATT CTGTTCAAAA
AGTTTGTGAA AAACAATCTC AAAAGGATGA AGAAAATAAA AATCAAACTT
CTGAAGGCAC AAATTCAAAT AATAGTAATA ATAGTAATGT ACCAACTTCA
CCATCGTTAT CATCTGCAAA AAGAGTTTTA TTAATTAAGC CACCAAGATC
GCCTGCTATT AATTCACGCC CACTCAATAA ACCATCTGTT ATTATCGGTA
ATCAAAATAA TAGTTCATCT CCATCTATTA CTCAAATTAC AAAACCAATA
AATTCACCAA CTTTTAAATC TCAAATTTCA TCTCCTTCTC CATTACTATC
TTCAAATAAA ATTGCAAATA TGATGTTACC ATCAAGTCCT GGAATGCATT
CAAAAATTAT TCCAAATAAC GTTATGAGTG CTTTAATTCA GAAAAAGAAT
GGTCAATCTC CAGTTTTATT GTCTTCTCCA AATGGAATGA GAGCTCAACC
ACAACCTTTA AATTTACAAC CTCAACAACC TCAACAACCT CAACAACCTC
AACAACCTCA ACAACCTCAA CAACCTCAAC AACCTCAACA GCAACAACCT
TCACAATCTC AACAACAAAT ACCTCAACAG CAAACACAAA TCACAACAAA
ATAAAGTTGG GTTAACATCA CCATTAATAT CATCTACTAA TCCTTCAAAT
GTAAATAAAA GTCCAATCAC AATTTCTATT CCAAGATTTA AAAAAAATCC
AAATACTCCA AATATGACAT CTTCTCAACA ATCTCAACAA CAACAGCCAC
CACCTCTACA ACAACAGCAA CAGCAACAAC AACAACAACC ATCTTCATCT
CCATCATTTA CATCAACAAA TAGTGGTCCA ATGAATGGTA TGCCAATTCT
TCCACCACAA ATGATGTCTC CATTATCGAC TTCGTTCCAA ATTCCAAATC
AATTTAGAAA TAAGAATAAT CTATTCCCAC CTTCACCATC AATGAATAGA
AATGGTGCAA GAGTTCCACC ATCACCATTA ATGTCAATGG GAATGAATCC
TCTACAACAT GCTAATAGTA TTAGTGGTGA AAAATTAAAT ACTGTTGATG
AGGATGGAAG TAAATCACCA CCAACTAATA GTCAACAACA AGCTCAACAA
CAACAACAAG CTCAACAACA ACAACAACAA CCACATCCAA ATATGGTGAA
TCCACAATTT CCGATGTTTC CATTATTTGG TATGGTACCA TTTAATATAA
ATACACCAAT AAGTATGGAA ACTACATTTA ATAGTCCATT TAATGGAAAA
TTTGCAATTA AAGGTTCAGT TGATTTTGGG TTCCAAATTG AATGTAATAT
TATGGGTAAA AGTTTGAAAG GTTTTCTAGG CGACCCATCA ACAATGTTGA
ATCCTCAACA AGCTGCAGCT GCATTCCAAC AACAACAACA TCAATATATC
TTACAACAAC AATTACTACA ACAACAACAA CTACAACAAC ATCAACAACA
CCAACAACAA CACCATCAAC AACAACAACA ACAACAACAA CAACAACAAC
AACAACAGTA TAATCCAATG CAATTCTTTG GAAATCAAGT ACCATTATCT
CCAATGCCTG GTAAATCTCC ATTCTTAAAT CCAAGAAGAA ATAGTGTCAG
TACCGCTGAG GGTTTAAATC ATCAATTTGA TTACCCAAAT TATGTAAATA
TGCAAAATTG GATCGAATCA TATAAACAAT GGCAAGATAT TGTTCAAAAA
TCAATATCAC AACAAGTACA ACAAGCACAA CAACAAGCAC AACATCAACA
ACAAGCACAA CAAGCACAAC AATTATCGTC ATCATCATCA AATAAAGATT
CATCAACACA ACCAACACCA ATTCAAACAC CAAAAAATGG TCCTCATATA
ATTGTAAATA GTGTAAATAG TAAAAAAGAT GACCAACAAA CTTCAACGTC
ATCAACATCA TCATTATTAT CCGCAAATTC GACACCAACA AAGACATCTG
TAGGAGGAAG TGAAAATGTT TCAGATAATC CAGATTTTTT AAGTTTTAAA
CAAAATGCAT TCCAAAAGTT AGAACAATAT CAAAAGATTC AATTAATAAA
TTTATTGGCT AAACAAGAAG AATCAAATAA TTTATTATTG GAAACTTTTG
AAAAGGATAA ATTAGCCGCT CAGGAACAAT CAAATGATGA GTTGGTGACA
AAATTACAAA TTAAATTTAA AGAAGATCAA GAAAAACTTC AACAAACTCA
TAAAGAACAA AAAACAAAAT TGGATTCAAC TCATCAATAT CAAGCAATAA
AATTCCATAA TGAAGTTGAA AAACAATGGT TGATTCAAAG AAATAATAAG
AGTTCGAAAT CATCTTTATC ACCAATTGGT TCTCCGGCAT TAACCCCATT
TATATCACCT TCACCATCAC CTTCTCCTTT ATTATCATCT TTTGGAATTG
GTAATAGTCC ATTAAATACA CCATCACATA ATCTACTATT GAAACAACAT
CAACTACATC ATTCATCTTT ATCAGCAACC ACTAGTAATA GTGGTAGTGG
TAATACAAGT GGTAGTGGTG GTGGCGGTGG TAGTGGCGGT GGTAATAATA
ATAACTCTTC GAATAGTGCA TCAACTTCTG TTGGAAATTC ATTAACAAAT
TCATCAGGTG GTGGTGCTCC TCCTCCATTA TCACTCTCTT CAAATTCACC
ACCAAGATCA CCTAATGATA TTAAATTAAC TATTCCAACA AATTCAATAA
CTTCAAAAGA TGATAATTGT ATTGTTGAAA AAGATAAAAC TTTTGAAAAG
GAAAAAGATA ATATTGTAAA TAATAAAGAA ATAGTATAAA GATAAGGAAA
AGGAAAAGGA AAAAGAAAAA GAAAAAGAAA AAGAAAAAGA AAAAGAAAAA
GAAAAAGAAA AAGAAAAAGA AAAGGAAAAA GAAAAAGAAT CTATAATACA
AAAACAAACA AAAGATATTG AGATGAAAGA TGCTTCTCTA TTACAAGAAG
TTTAAATTTA TTCTCAATTT CAATAATGTA AATTCACCCT CATTTTAAAA
TAAATAATAA ATAAAATTTA ATAATAAAAA AAAGA

Translated Amino Acid Sequence Contig-U15784-1

q*li**ynykqiiynn*asssl*is*vttir***nlnhlktfiylf*iiylffyncfnca
infstlflisiyy**KYYLLTKLIKKKKKIKKNKXKIKKXKKK---

---YFELAIKEANQLYNKSKQKQYIKPIDNDERDIYIEGQDYDDDDSDQYYEDEKYNNNS
NNNNNRNNNSNNNSKNNNNINIRNKIKDYNDYNDEIDSRTNSYRMNDNNGGEFDRKRLRD
SPSKSYLNNNNNNNNNNNNNNNNNNNNNNNNNNNNHHNHHHHHHRKEEHHSQPTIEEEEE
EEEEYDTNSGANGELRIDSKDEIDEDDELENRYIGINRNEDNNNNNNNNNNNKNKNINKD
DDEEEEEEENNNLELIPNHPVKKRKSFDGTADYDDSVQKVCEKQSQKDEENKNQTSEGTN
SNNSNNSNVPTSPSLSSAKRVLLIKPPRSPAINSRPLNKPSVIIGNQNNSSSPSITQITK
PINSPTFKSQISSPSPLLSSNKIANMMLPSSPGMHSKIIPNNVMSALIQKKNGQSPVLLS
SPNGMRAQPQPLNLQPQQPQQPQQPQQPQQPQQPQQPQQQQPSQSQQQIPQQQTQITTK*
swvnitiniiy*sfkck*ksnhnfyski*kkskyskydifstistttattstttatattt
ttifisiiyink*wsnewyanssttndvsiidfvpnsksi*k*e*siptftine*kwcks
stitinvngnessttc**y*w*kikyc**gwk*ittn**sttssttttsstttttttsky
gestisdvsiiwygti*ykytnkygnyi**si*wkicn*rfs*fwvpn*m*yyg*kferf
srrpinnvesstscscipttttsiyltttitttttttttsttptttpstttttttttttt
tv*snailwksstiisnaw*isilkskkk*cqyr*gfkssi*lpklckyakldrii*tma
rycskinittsttstttsttsttsttsttiiviiik*rfinttntnsntkkwssynck*c
k**kr*ptnfnviniiiiirkfdtnkdicrrk*kcfr*srffkf*tkcipkvrtiskdsi
nkfig*trrik*fiignf*kg*isrsgtik**vgdkitn*i*rrsrktstns*rtknkig
fnssissnkip**s*ktmvdskk**efeiifitnwfsginpiyitftitfsfiiifwnw*
*sikytit*stiettsttsfifisnh***w*w*ykw*wwwrw*wrw****lfe*cinfcw
kfinkfirwwcsssiitlfkfttkit**y*inysnkfnnfkr**lyc*kr*nf*kgkr*y
ck**rnsikirkrkrkkkkkkkkkkkkkkkkkkkkkrkkkknl*yknkqkilr*kmllyy
kkfkfilnfnnvnspsf*nk**ikfnnkkk

Homology Contig-U15784-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U15784-1 (Contig-U15784-1Q) /CSM_Contig/Conti...  1088  0.0
Contig-U13044-1 (Contig-U13044-1Q) /CSM_Contig/Conti...   389  e-107
Contig-U15300-1 (Contig-U15300-1Q) /CSM_Contig/Conti...   180  1e-44
Contig-U15627-1 (Contig-U15627-1Q) /CSM_Contig/Conti...    50  3e-05
Contig-U14704-1 (Contig-U14704-1Q) /CSM_Contig/Conti...    50  3e-05
Contig-U01748-1 (Contig-U01748-1Q) /CSM_Contig/Conti...    50  3e-05
Contig-U14010-1 (Contig-U14010-1Q) /CSM_Contig/Conti...    48  1e-04
Contig-U06697-1 (Contig-U06697-1Q) /CSM_Contig/Conti...    48  1e-04
Contig-U14996-1 (Contig-U14996-1Q) /CSM_Contig/Conti...    46  4e-04
Contig-U09807-1 (Contig-U09807-1Q) /CSM_Contig/Conti...    46  4e-04

Homology Contig-U15784-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ349637) Dictyostelium discoideum cDNA clone:dda37l05, 3' ...   521   0.0    3
(BJ349849) Dictyostelium discoideum cDNA clone:dda37h21, 3' ...   513   0.0    3
(AU061401) Dictyostelium discoideum slug cDNA, clone SLE108.      747   0.0    2
(BJ387952) Dictyostelium discoideum cDNA clone:dds7h02, 5' e...   747   0.0    2
(BJ323580) Dictyostelium discoideum cDNA clone:dda11c08, 5' ...   660   0.0    2
(BJ390084) Dictyostelium discoideum cDNA clone:dds21j03, 5' ...   722   0.0    2
(BJ361016) Dictyostelium discoideum cDNA clone:ddc9g10, 5' e...   642   0.0    2
(BJ336964) Dictyostelium discoideum cDNA clone:dda55e20, 5' ...   662   0.0    3
(BJ408530) Dictyostelium discoideum cDNA clone:dds46j06, 3' ...   521   0.0    3
(BJ408361) Dictyostelium discoideum cDNA clone:dds45f16, 3' ...   521   0.0    3

Homology Contig-U15784-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116979_92(AC116979|pid:none) Dictyostelium discoideum chromoso...   814   0.0
(Q0VFZ6) RecName: Full=Uncharacterized protein C2orf77;  &BC1174...    40   0.73
AK301851_1(AK301851|pid:none) Homo sapiens cDNA FLJ59063 complet...    40   0.73
AY268943_1(AY268943|pid:none) Tetrahymena thermophila strain Cu4...    39   1.6
FM992691_96(FM992691|pid:none) Candida dubliniensis CD36 chromos...    39   2.1
(O14686) RecName: Full=Histone-lysine N-methyltransferase MLL2; ...    39   2.1
AB209494_1(AB209494|pid:none) Homo sapiens mRNA for myeloid/lymp...    39   2.1
BC094100_1(BC094100|pid:none) Xenopus laevis hypothetical protei...    38   3.6
AB002583_206(AB002583|pid:none) Cyanidioschyzon merolae chloropl...    38   3.6
FN357407_36(FN357407|pid:none) Schistosoma mansoni genome sequen...    38   3.6