Dictyostelium discoideum cDNA Contig-U15722-1

Assembled

Chromosomal Location of Contig-U15722-1

Sequence Contig-U15722-1

ATCGCTTCCG ACTTCGGTTC AATAACGAAA AAGATTTTCG CCTTTTACTA
AAATACTTCC GTGAACCGAA GTCATAAAGG CAGCTTTCAT TATTTTTTTG
AATAGGTCTT CCTATTCCTA AAAATTTCAA TTTAAAAAAA ATAAAGGAAA
AAACACACCA AAATTAAATA AGTAAGAATA AAAATGAAAT ATTTATTAGT
ATATTTACAC ATATTACTAT TTTGTTTATT AAAGATCAAT AGCCAAAAGT
ATTGCACTTA TAGTGGTGTT GGAGAAGATT ATAATATCAA ATTTGATGTC
TTACAAACAA ATGGTGGTAT TGGTTTTCTA TACTCATATT TAAGTGTTAT
TTTTACAACT TGTAATTATA CTATTCCTTG TGGTAGTAAT AGTAATAATG
TATTGTGTGG ATCATATCAT TCAACTGTTC CACGCAAGTA TCTTTCATTG
GGATTTGTTA ATGGCAGTAC ACATAGTTAT AGCAAAGACG GACTAATGAT
AACATATATA TCACAGGATA CAACAAATGA TAATGATTGC AAAAGATATA
CAACAAATGT GATTTTTCAA TGTAGACCAG ATGGTGATGT ATCCGATTCA
TTAGATGTTG GCATCGACAA TATACTTATT GATTCATGTA TTGTTGAATT
CACACTCTAT TTACGTACAG TGTGTCAAAC ATGTCCAAAC TGTTTAAAAA
CACATCAAAC ATCATGTAAT GTGAAAAGTG GTTGGTGTAC TTGTGATGGT
AATACAAAAG GTTTAAATTG TGATCAATTA AATGCAAATA TATCATCGGT
ATTAACACCA ACAATTAGTG GTGGTGATGT TATAATGTCT GGTGATTTTT
CAAATATTTA TAATATTAGC TCAAGTATTA CAATTTCAAT TGGTACTTCA
ATTTGTAATA GTGTTATTTT CTCAAGTAAT AAATCACAAA TCAAATGTAC
GATAGGTGCA GGTGAAGGTG ATCAACAAAT TAAATTATCA GATGGAAATG
GTGCAACATT AATATATGAT GGATTTTATT ATAGAGCTCC TTGTTCAGTC
GAATGTTCAC CATTTGGTAA ATGTAATGAT CACGTTGGTA ATTGTATTTG
TAATGATGTT GCAATTGGTA TAGATTGTAA AACTTTAAAT TTATAGTAAC
TGGTGGTCAA GTTTATTTAA ATGGCAATTT CTCAAATGTA TATGTGATAC
TCAAACCAAA GGTTTATCAT GTGAAGAATC AAGATTATTA ATTGAATCAG
CCGATCCAAC AAGTTTAGAT GGTGGTACAA CTACAATCAC TGGTTATTTT
GGTACAACAA CATCATTACT ATCAATTAAA ATAGGTGATT CTCAATGTAC
AAATATTAAA GTAGAGAGCG ATACAAAATT AAAATGCGAT ATTGGTCCAG
GTGAAGGAAC TCATAATGTA ACAGTCACAG ATTACGATCT TTCATTTACT
GGTGTTGGTA TGTTTCAATA TGTGGGTCAA ATAAATAAAA TATCAAAAAT
ATNCTGGTGG TGCAATCGCT GGTATAGCTG CTGGTTGTGT TGTTGGTGTT
TC-------- --TTCAAAAG CAAAAGCATT CGAATATCAA TACTACAAAT
GTCCACTCAA TTGTTCAACA CCAAATGGTA CTTGTGATAA TAATACTGGT
AATTGTACAT GCCATAATGA ACATTTTGGT AATTCTTGTG AATTTACTCG
ATGTCCACTC GATTGTTCGA CACCAAATGG TACTTGTGAT AATAATACTG
GTAATTGTAC ATGCCATAAT GAACATTTTG GTAATGGTTG TGAATTTACT
CGATGTCCAC TCAATTGTTC GACACCAAAT GGTACTTGGT GATAATAATA
CTGGTAATTG TACATGCCAA TAATGAACAT TTTGGTAATG GTTGTGAATT
TACTCGATGT CCACTCGATT GTTCGACACC CAAATGGGTA CTTGTGATAA
TAATACTGGT AATTGTACAT GCCATAATGA ACATTTTGGT AATTCTTGTG
AATTTACTCG ATGTCCACTC GATTGTTCGA CACCAAATGG TACTTGTGAT
AATAATACTG GTAATTGTAC ATGCCATAAT GAACATTTTG GTAATGGTTG
TGAATTCACT CAATGCCCAC TCTATTGTTC AACACCAAAT GGTACTTGTG
ATATTAATAG TGGTATTTGT ACATGTGATA ATGAACATAT TGGTAATGGT
TGCGAAATTA AATTTATTGA ATGTAAACAT AAATGTTCAA CCAAACATGG
AATATGTGAT AATGATAGTG GTAATTGTAA ATGTGATACT CAAACAAAAG
GATTAACGTG TGAAGAATCA AGATTATTAA TTGAATCATT AGACTCAATC
AATTCAAAAG GTGGTACAAT AAATATAATT GGTTATTTTG GAAATACAAC
ATCATTATTA ACAATTAAAA TTGGTGAATC ACAATGTAAA AATATCAAAG
TATTCAATGA AACAACATTA AAATGTGATA TTGGTGAAGG TAAAGGTATT
CATAATATTA CAATCATTGA TGATGACCTT TCGTTCACAG CAATCAATAA
GTTCCAATAT CTCGATGAAA AAACAAAAAT CTCAAAAATA TCGAGAGGTG
CAATTGCTGG TATTGTTGTT GGTTGTGTTG TTGCTGTTTC ATTAATTGGT
TCTATTGCTT TTTATTATCA TCACAAAAAT AAAAAGGTTA ATCTTTTCTT
CTAAAAACTA AAATAAAATT TAACCATTAT GGTTTTTTAT TACAATAATT
AAAAAAAAAA AAAAAA

Translated Amino Acid Sequence Contig-U15722-1

slptsvq*rkrfspftkilp*tevikaafiiflnrssys*kfqfkknkgkntpklnk*e*
k*niy*yiytyyyfvy*rsiaksialivvlekiiisnlmsykqmvvlvfythi*vlflql
viilflvvvivimycvdhiiqlfhasifhwdllmavhiviaktd***hiyhriqqmimia
kdiqqm*ffnvdqmvmypih*mlastiyllihvllnshsiyvqcvkhvqtv*khikhhvm
*kvvgvlvmviqkv*ivin*mqiyhry*hqqlvvvml*clvifqifiilaqvlqfqlvlq
fvivlfsqvinhksnvr*vqvkvinklnyqmemvqh*ymmdfiiellvqsnvhhlvnvmi
tlvivfvmmlqlv*ivkl*IYSNWWSSLFKWQFLKCICDTQTKGLSCEESRLLIESADPT
SLDGGTTTITGYFGTTTSLLSIKIGDSQCTNIKVESDTKLKCDIGPGEGTHNVTVTDYDL
SFTGVGMFQYVGQINKISKIXWWCNRWYSCWLCCWCF---

---QKQKHSNINTTNVHSIVQHQMVLVIIILVIVHAIMNILVILVNLLDVHSIVRHQMVL
VIIILVIVHAIMNILVMVVNLLDVHSIVRHQMVLGDNNTGNCTCQ**tfw*wl*iysmst
rlfdtqmgtcdnntgnctchnehfgnsceftrcpldcstpngtcdnntgnctchnehfgn
gceftqcplycstpngtcdinsgictcdnehigngceikfieckhkcstkhgicdndsgn
ckcdtqtkgltceesrlliesldsinskggtiniigyfgnttslltikigesqcknikvf
nettlkcdigegkgihnitiidddlsftainkfqyldektkiskisrgaiagivvgcvva
vsligsiafyyhhknkkvnlff*klk*nltimvfyynn*kkkk

Homology Contig-U15722-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U15722-1 (Contig-U15722-1Q) /CSM_Contig/Conti...  4649  0.0
Contig-U13778-1 (Contig-U13778-1Q) /CSM_Contig/Conti...   688  0.0
Contig-U15719-1 (Contig-U15719-1Q) /CSM_Contig/Conti...   192  2e-48
Contig-U12259-1 (Contig-U12259-1Q) /CSM_Contig/Conti...    52  5e-06
Contig-U12569-1 (Contig-U12569-1Q) /CSM_Contig/Conti...    44  0.001
Contig-U01123-1 (Contig-U01123-1Q) /CSM_Contig/Conti...    44  0.001
Contig-U15975-1 (Contig-U15975-1Q) /CSM_Contig/Conti...    40  0.018
Contig-U15283-1 (Contig-U15283-1Q) /CSM_Contig/Conti...    38  0.071
Contig-U15176-1 (Contig-U15176-1Q) /CSM_Contig/Conti...    38  0.071
Contig-U12461-1 (Contig-U12461-1Q) /CSM_Contig/Conti...    38  0.071

Homology Contig-U15722-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ444524) Dictyostelium discoideum cDNA clone:ddv56l16, 3' ...  1330   0.0    4
(BJ427535) Dictyostelium discoideum cDNA clone:ddv62a20, 5' ...  1291   0.0    1
(BJ329199) Dictyostelium discoideum cDNA clone:dda24l02, 5' ...  1273   0.0    1
(BJ441906) Dictyostelium discoideum cDNA clone:ddv48a07, 3' ...  1259   0.0    4
(AU284609) Dictyostelium discoideum gamete cDNA clone:FC-BE2...  1251   0.0    4
(BJ446789) Dictyostelium discoideum cDNA clone:ddv63h22, 3' ...  1251   0.0    4
(BJ446619) Dictyostelium discoideum cDNA clone:ddv63e11, 3' ...  1251   0.0    4
(BJ446427) Dictyostelium discoideum cDNA clone:ddv62n15, 3' ...  1251   0.0    3
(BJ446355) Dictyostelium discoideum cDNA clone:ddv62o11, 3' ...  1251   0.0    5
(BJ446323) Dictyostelium discoideum cDNA clone:ddv62j08, 3' ...  1251   0.0    4

Homology Contig-U15722-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC117076_37(AC117076|pid:none) Dictyostelium discoideum chromoso...   178   2e-49
AC117075_64(AC117075|pid:none) Dictyostelium discoideum chromoso...   125   6e-27
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso...   112   6e-23
AC116920_20(AC116920|pid:none) Dictyostelium discoideum chromoso...   112   7e-23
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom...   109   5e-22
AC116920_24(AC116920|pid:none) Dictyostelium discoideum chromoso...   109   6e-22
AC116100_9(AC116100|pid:none) Dictyostelium discoideum chromosom...   108   8e-22
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso...   101   1e-19
AC116967_7(AC116967|pid:none) Dictyostelium discoideum chromosom...    95   1e-17
AC116920_25(AC116920|pid:none) Dictyostelium discoideum chromoso...    95   2e-17