<Clone: Contig-U15176-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U15176-1

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Assembled

Chromosomal Location of Contig-U15176-1

< more Chromosomal info >

Chromosome Number 5
Length 5062330
Start Poin 2,362,225
End Point 2,361,304
Strand MINUS

Sequence Contig-U15176-1

AAAAAAAAAA AAATGGAACC AATTTCAGAT TTTAAAGTAT GGTATTGTAC
TGGAACATCA ACAGGTATTG GTTTATCTAT TGTAAAGAAA TTATTACTTC
AACAAACTAA TAGAGTTGTT GCAATCACTA GAAATCCACA AAAATTGGAA
AAAGAAATTC CTGTTGAACA TTTACCAAAT CTTTTAGCCA TTAAAACTGA
TATCACTAAT GAAGAAAGTG TTAAACAATC AATTTCAAAA ACAATGGAAA
CTTTTGGTAG AATTGATGTT GTTGTAAATA ATGCTGGTGT TGGTATTATT
GGTGCTGTTG AAGAGTTATC AGATCAAGAA TTCAGAAAAG CATTTGATGT
AAACTTTTTT TCAGTTTTAC ATGTTTGTAG AAATGTTGCA CCAATTATGA
GAAAACAAAA GTCTGGTTTA ATTATGAATG TTGCATCAGT GTTAGCTTGG
TTCACAGTTG GTGAATATGC AGCATATAAT ACTACTAAAT ATGCATTAAA
TGGATTAACC TCGACATTAG GCCAAGAATT AGCACCATTT GGTATTAAAG
TAGTATTATT ATCACCAAGT GGTTTCAAAA CTAATTTCGT AAATGATAAT
ATGGAATCTG CTAAAGTTAG AATTGAAGGT TACAAAACTG ATGACCTTGC
AAAATGGTTA GATGGTATTG TAAATGAAGC TAGAGGTGAT CCAGATAAAT
TTGCTGATGC AGTTATCGCT GTCTCAAAAC TCAAAAATGG ATGAAGTCCC
TAAGAACCTA TTCTTAGGAA CAGCAGCTGT TAATTGGATG GAAGGAGAAT
TTAAAAAACA AATTGATGAA TTAAAATTAA ATCATGAATT AACAATTTCA
ACTGATTTCC CAAATTTACC ACCATTATAA ATTAAATTAA TTAAATAAAA
TAAAAACAAA TAAAAACAAA GAAAAAAAAA AAAAAAAAAA AAAAAAAA

Translated Amino Acid Sequence Contig-U15176-1

<All Frames> 
KKKKMEPISDFKVWYCTGTSTGIGLSIVKKLLLQQTNRVVAITRNPQKLEKEIPVEHLPN
LLAIKTDITNEESVKQSISKTMETFGRIDVVVNNAGVGIIGAVEELSDQEFRKAFDVNFF
SVLHVCRNVAPIMRKQKSGLIMNVASVLAWFTVGEYAAYNTTKYALNGLTSTLGQELAPF
GIKVVLLSPSGFKTNFVNDNMESAKVRIEGYKTDDLAKWLDGIVNEARGDPDKFADAVIA
VSKLKNG*sp*epilrnssc*ldgrri*ktn**ikiks*innfn*fpkfttiin*in*ik
*kqiktkkkkkkkkkk


Homology Contig-U15176-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U15176-1 (Contig-U15176-1Q) /CSM_Contig/Conti...  1701  0.0
Contig-U11392-1 (Contig-U11392-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U09334-1 (Contig-U09334-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U15196-1 (Contig-U15196-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U12213-1 (Contig-U12213-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U06753-1 (Contig-U06753-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U03598-1 (Contig-U03598-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U15722-1 (Contig-U15722-1Q) /CSM_Contig/Conti...    38  0.024
Contig-U11922-1 (Contig-U11922-1Q) /CSM_Contig/Conti...    38  0.024
Contig-U11820-1 (Contig-U11820-1Q) /CSM_Contig/Conti...    38  0.024


Homology Contig-U15176-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(AU264232) Dictyostelium discoideum vegetative cDNA clone:VS...   729   0.0    3
(C92634) Dictyostelium discoideum slug cDNA, clone SSF560.        729   0.0    3
(BJ430514) Dictyostelium discoideum cDNA clone:ddv7d13, 3' e...   729   0.0    3
(BJ429931) Dictyostelium discoideum cDNA clone:ddv5n08, 3' e...   729   0.0    3
(AU284961) Dictyostelium discoideum gamete cDNA clone:FC-BR1...   722   0.0    2
(AU284541) Dictyostelium discoideum gamete cDNA clone:FC-BB2...   722   0.0    2
(C25712) Dictyostelium discoideum gamete cDNA, clone FC-BB22.     722   0.0    2
(AU262941) Dictyostelium discoideum vegetative cDNA clone:VS...   720   0.0    2
(AU072961) Dictyostelium discoideum slug cDNA, clone SSF560.      450   e-122  1
(GR586563) CCAB1970.b1 CCAB Dictyostelium purpureum 0 hr sta...   101   1e-36  4


Homology Contig-U15176-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AC116960_60(AC116960|pid:none) Dictyostelium discoideum chromoso...   256   2e-72
AC117072_2(AC117072|pid:none) Dictyostelium discoideum chromosom...   162   4e-41
AC116963_71(AC116963|pid:none) Dictyostelium discoideum chromoso...   145   4e-35
CP000629_710(CP000629|pid:none) Agrobacterium radiobacter K84 ch...   132   7e-31
CP000094_3274(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ...   135   3e-30
CP000680_2191(CP000680|pid:none) Pseudomonas mendocina ymp, comp...   133   1e-29
CP000284_588(CP000284|pid:none) Methylobacillus flagellatus KT, ...   132   1e-29
CP000685_1834(CP000685|pid:none) Flavobacterium johnsoniae UW101...   129   2e-29
CP001053_3001(CP001053|pid:none) Burkholderia phytofirmans PsJN ...   132   2e-29
CP001037_530(CP001037|pid:none) Nostoc punctiforme PCC 73102, co...   131   4e-29


<Clone: Contig-U15176-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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