Dictyostelium discoideum cDNA Contig-U14966-1

Assembled

Chromosomal Location of Contig-U14966-1

Sequence Contig-U14966-1

ACTGTTGGCC TACTGGNATT TTTGTTACAA CATTCATATT AAATAAAAGA
AAAAAAAAAT GAATAAAATC TTATCAATAC TTTTATTAAG TATTTTAATT
TTATTTATCC TAAGAGTGGA ATCATATCCA ACATATGGTG GATCAAATTC
AGCAAATATT AGAAGAGAGG ACAGACATTC ATTTAGAGCT CCATTCTTAC
AAAGGGGTAC TGGTATTTTA TATTGGGATA TCGAAGGTTC AACAATTGTA
AATGATGATT TCATTCGTTT AACATCGGAC CAAAAATCAT TACATGGTGC
AATTTGGAAT ACTGAACCAA TGGAACAACC ATGGTGGGAA GTTGTATTTG
AATTTAGAGT ACATGGTGCA GGTAGAATTG GTGCTGATGG TATCGCTCTT
TGGTTAGTAG ATAGAAAAGA AGGTAATTCT CAAGATTTCT CAATTTATGG
TTCTAAAAAT TTATGGAAAG GTTTGGCTAT TATTTTTGAT ACTTTTGATA
ATGATCAAAA TGGTGATCAT CCATTAATTT CAGTATTTTA TAATGATGGT
ACTAAATTTT ATGAAACAGC AAAAGATGGT AGTAATATGA AATTAGGTAG
TTGTTCATCA AGATATAGAA ATGATAAACA TAATGCCAAA TCAAGAATTA
GATATTATCA TGGTTTATTG AGTGTTGAAA TCGATCCAAA TGGATCAGGT
ATTTTCGAGA AATGCGTTCA AGATGTTCGT CTTGATATTC CAACACGTTA
TACATTTGGT GTTTCAGCTG CCACTGGTGG TTTAACTGAT AATCATGATG
TTTACTCTTT TGATACCTTT AGTTTAGATG CTTCAGTTTC AAATCAAAAT
ACAAATAATT ATAATAATGT TCAATTTGAA AGAGAAAGAT TAGAAAAACA
AAGATTAGAA TATGAATTAC AACAAACTCA ACAACAACAA ACTCAACAAC
AACAACAACA ACAACAACAA CAACAACAAA CTCAACAACA AACCCAACAA
AATAACCAAG ATAAAGAATA TCAAGAATTT TTACAATATA AAGCTCAACA
ACAACAACAA AATAACTATC AACAAACTCA AAATGATTTA ATTGAAAAAT
TAAATGAAAT TCAACAAGAA CAACAACAAA CTCAACCACC ACAACAACAA
CAACAACAAA CTCAACCTCC ACAACAAAAA TTACAAGATG AAATTAAAAA
TTTATCAGAA AAAGAACAAA TTGGATTTTT AGTTAAAAAG GTTGATTCAT
TAGTTGAAGC AATTCATTCA TTACATGTAA TTTTAGATGA TCCAGATTAT
AAAAAGAGTT TTGATGGTTT AAGAGATCAA GTTAATGTAA TTAGTCAAGC
ATTAGTTTCA TTATCACAAG GTTCACTTAA AGTTAAAGAT TTTGAAAGTT
TCCGTTCAAC TTATGATCAA AAGCAATCAC AATTCATTAA AGACTTTTAT
GATTTCAAAT CAACAATGCA AGATCTTAAA GCAACCATCA ACAATAGATT
CAATAATCAA GATAATGACG TCACCAAATC AATTGAATCA GTTAATATGA
ATTTAAATTC TTTAAGAAAA TTAGTTGAAG CTTCAACTAG AGATACTCAA
AAAATCTCTT CCATCTTAAA TTCAAACGCT GATGAATTGG CAAACACAAT
TCAAAAACAT AGTTCATTTG GTTTTTGGAC TTACTTTTTA TTCGTTCAAG
CTATCTTTAT CTTTGGTTTT GTTTTTTGGA GAAAATATAA AGATGATAAT
AATAAAAAAT TAATTTAAAA AAAAATAAAA TAAAATAAAT AAATAAAAAA
AATAAAATAA AAATTTAAAA ATAATAATAA AATAATAAAA TAATTAATAA
TACCAATAAT AATAATAATA ATAATAATAA TAAAATAAGT ATGTCAATTT
ATAAATTGTA ACAATTAAGA ATTTCCAATA AAAATAATAA GTTTTTAGGA
TAAAATTTTT TAAACAAAAA AAAAAAA

Translated Amino Acid Sequence Contig-U14966-1

llaywxfcynihik*KKKKMNKILSILLLSILILFILRVESYPTYGGSNSANIRREDRHS
FRAPFLQRGTGILYWDIEGSTIVNDDFIRLTSDQKSLHGAIWNTEPMEQPWWEVVFEFRV
HGAGRIGADGIALWLVDRKEGNSQDFSIYGSKNLWKGLAIIFDTFDNDQNGDHPLISVFY
NDGTKFYETAKDGSNMKLGSCSSRYRNDKHNAKSRIRYYHGLLSVEIDPNGSGIFEKCVQ
DVRLDIPTRYTFGVSAATGGLTDNHDVYSFDTFSLDASVSNQNTNNYNNVQFERERLEKQ
RLEYELQQTQQQQTQQQQQQQQQQQQTQQQTQQNNQDKEYQEFLQYKAQQQQQNNYQQTQ
NDLIEKLNEIQQEQQQTQPPQQQQQQTQPPQQKLQDEIKNLSEKEQIGFLVKKVDSLVEA
IHSLHVILDDPDYKKSFDGLRDQVNVISQALVSLSQGSLKVKDFESFRSTYDQKQSQFIK
DFYDFKSTMQDLKATINNRFNNQDNDVTKSIESVNMNLNSLRKLVEASTRDTQKISSILN
SNADELANTIQKHSSFGFWTYFLFVQAIFIFGFVFWRKYKDDNNKKLI*kkik*nk*ikk
ik*kfknnnkiik*liipiiiiiiiiik*vcqfincnn*efpikiisf*dkif*tkkk

Homology Contig-U14966-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U14966-1 (Contig-U14966-1Q) /CSM_Contig/Conti...  1754  0.0
Contig-U09610-1 (Contig-U09610-1Q) /CSM_Contig/Conti...    58  5e-08
Contig-U11448-1 (Contig-U11448-1Q) /CSM_Contig/Conti...    56  2e-07
Contig-U13857-1 (Contig-U13857-1Q) /CSM_Contig/Conti...    50  1e-05
Contig-U16365-1 (Contig-U16365-1Q) /CSM_Contig/Conti...    48  5e-05
Contig-U12384-1 (Contig-U12384-1Q) /CSM_Contig/Conti...    46  2e-04
Contig-U14975-1 (Contig-U14975-1Q) /CSM_Contig/Conti...    44  8e-04
Contig-U10976-1 (Contig-U10976-1Q) /CSM_Contig/Conti...    44  8e-04
Contig-U09273-1 (Contig-U09273-1Q) /CSM_Contig/Conti...    44  8e-04
Contig-U15252-1 (Contig-U15252-1Q) /CSM_Contig/Conti...    42  0.003

Homology Contig-U14966-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ391084) Dictyostelium discoideum cDNA clone:dds15b06, 5' ...  1076   0.0    2
(BJ361313) Dictyostelium discoideum cDNA clone:ddc16n17, 5' ...  1066   0.0    2
(BJ388807) Dictyostelium discoideum cDNA clone:dds16f10, 5' ...   799   0.0    2
(BJ324656) Dictyostelium discoideum cDNA clone:dda7h10, 5' e...   823   0.0    2
(AU268568) Dictyostelium discoideum vegetative cDNA clone:VS...   846   0.0    1
(AU267485) Dictyostelium discoideum vegetative cDNA clone:VS...   846   0.0    1
(BJ400828) Dictyostelium discoideum cDNA clone:dds15b06, 3' ...   846   0.0    1
(BJ374892) Dictyostelium discoideum cDNA clone:ddc16n17, 3' ...   846   0.0    1
(BJ343572) Dictyostelium discoideum cDNA clone:dda16a18, 3' ...   846   0.0    1
(BJ341595) Dictyostelium discoideum cDNA clone:dda7h10, 3' e...   846   0.0    1

Homology Contig-U14966-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC115599_8(AC115599|pid:none) Dictyostelium discoideum chromosom...   897   0.0
AY296117_1(AY296117|pid:none) Ixodes scapularis mannose-binding ...   191   1e-46
AE014296_1559(AE014296|pid:none) Drosophila melanogaster chromos...   181   7e-44
BT074808_1(BT074808|pid:none) Osmerus mordax clone omor-eva-516-...   167   1e-39
AE014297_3625(AE014297|pid:none) Drosophila melanogaster chromos...   164   1e-38
AB053114_1(AB053114|pid:none) Polyandrocarpa misakiensis mRNA fo...   164   1e-38
DQ214561_1(DQ214561|pid:none) Taeniopygia guttata clone 0061P001...   162   3e-38
S42626(S42626;A55876) ER-golgi intermediate compartment protein ...   161   9e-38
AJ851704_1(AJ851704|pid:none) Gallus gallus mRNA for hypothetica...   160   2e-37
(Q9UQG6) RecName: Full=Protein ERGIC-53; AltName: Full=ER-Golgi ...   159   3e-37