Dictyostelium discoideum cDNA Contig-U14964-1

Assembled

Chromosomal Location of Contig-U14964-1

Sequence Contig-U14964-1

TGGATCTTTA CATTAATATA ATTAATTAAT ATAATAAAAT TTAATTTCTT
CTTTATTTTA AAAAATTATA AATTTAACAT TATTTTTTAA ATATTGCTTT
ATTTGTAATC AAAAGATATA ATAAAAAAGA GATGAATGAA ATTGATGAAA
ACCACACTTC TGAAAATAAT AAAAATAAAA AAATCAATCC AATAATAAAA
ATTATTGTTA ATCATTATAA AAACAATCCA CAAAAAAAAA CAGAACAACA
AATTGAAAAT GAAAAATATT TATTAGGAAA AAGAGTTAAA TTTAATAGAT
GGATTTTATT TCCAATTGCA ATTTTATCAC AATTTACTGT AGGTTCATTA
TATGCATGGA GTATTTATAA TAAACCAGTG GATGGAGCAA TTTTTGGTGA
TGAAAATAAA GGAATGGCAC CCTACACATT TTATGTTGCA TTCTTTTTCT
TTGGTAGTGC TTGTTCAATA TTGGGTCCGG TTTTGGATAG AATTGGTCCT
ATGAAATCAA TGTATATTGG TTCTACATTA TTCGTTGCTG GTCATTTTTT
AACTGCTCTT GGAATTTACA CAAAAGTAAT TTGGCTAGTT TATATTGGTT
ATGGGGCATT TGGTGGTTCG GGCATGGGTA TTTGTTACAT TGGTCCTGTT
TCAACATTAC AAAAATGGTT TCCGGATCAT AGAGGTTTAG CAGCGGGTTT
GGCTGTATGT GGATTTGGTG CTGGCTCAAT TGCTTTTGGT TCAATACCAA
TAAAAATAAT TGCAAGGGTT GGTCTTGCAT TAAATTTCGT AGTGTTGGGG
TCATTATTTT TCGGTATATT ATTTTCAATT TCATTTATTT TTAGAACACC
ACCACCAAAT TTTCAAGTTA ATGGTAAAGA TTCTGATCAA AATAGATTAA
AAGAAAACTC AGATGAAGAA TCTAATATTA ATGAAGGAAC TGAATCACCG
ACATCATCAA TAGATAAAAA TAATATTAAT AATAAAGTTT GTAAGAATGA
TGAAATATCT TCATCATCAG TATCACAATC AACCACTGAT GATAAATTAC
CAGAAAAACA TCAACAACAA AATGAAATTG GATCATCATC TGAAAATGTT
ATTATTAAAA CTAAAAAAGA ACCTAAATTT TCAGATTATT TATTATCTGA
TGCAATTACA TCATCAGAGT ATACAATTAT TTATTTAATG TTTTTCTGTA
ATGTCATATT TGGAGTGGTT GCAATTGGAA GATTAAGTGA TATGTACCAA
TAAAAATAAT TGCAAGGGTT GGTCTTGCAT TAAATTTCGT AGTGTTGGGG
TCATTATTTT TCGGTATATT ATTTTCAATT TCATTTATTT TTAGAACACC
ACCACCAAAT TTTCAAGTTA ATGGTAAAGA TTCTGATCAA AATAGATTAA
AAGAAAACTC AGATGAAGAA TCTAATATTA ATGAAGGAAC TGAATCACCG
ACATCATCAA TAGATAAAAA TAATATTAAT AATAAAGTTT GTAAGAATGA
TGAAATATCT TCATCATCAG TATCACAATC AACCACTGAT GATAAATTAC
CAGAAAAACA TCAACAACAA AATGAAATTG GATCATCATC TGAAAATGTT
ATTATTAAAA CTAAAAAAGA ACCTAAATTT TCAGATTATT TATTATCTGA
TGCAATTACA TCATCAGAGT ATACAATTAT TTATTTAATG TTTTTCTGTA
ATGTCATATT TGGAGTGGTT GCAATTGGAA GATTAAGTGA TATGTGCCAA
AACATGTTTG GTAAAAGTAA AGTTGTTGGT TCTATGGTGG TATCAGTTAA
TGGTGCATTC AATTTATTCG GTAGATTAAT GTTTGGTTTT GTTAGTGATA
AATTTGGTAG AAAGAAATGT TATATAGCAA TGCTTACCAT TCAATGTTTT
TCAGTTGGTT TCTTAATAAA AGCAATGAAA GATTTAAACT ATGAAGCTTT
CATAGGACTA ATTTGGATTT CCACACTTTG TTATGGTGGC TCATTCGGTG
TAATACCAGC ATTTTTAAAT GACATGTTTG GTTCTAAAAA TGTTGGAGCC
ACTCATGGTT TAATTTTATC GGCATGGGCA TTAGCTGGTG TTGGTGGTGG
TATTGCTTTC TCATTTATCT ATAATGATTT AATTAATAAT CATGGCTATG
GTCATCATTC AGCTTATCCT TATTTGGTTA ATTATTATTG GATAGTTGGT
TTCATTTGTG TGGGTTGGGT TTTAGTTTGG TTCATAAGAA CAACTGTACC
TGAAGTTTTC TTACCACCCA TTAAAGGTCA AATCTTAAGA ATTAGGATAT
TTAATCGTTA CTTAAGGATT AGTAAATCAA AAGGTTTTGA ATTATTAACA
AATCAACAAT TTAAACAAGA ATGGGATAAT TATTTAAACT GCTTAATAAA
AATATATAAA AAAAGAATAA AAAAGTTAGA TTTTTTTAAG TTTTAAAAAA
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAA

Translated Amino Acid Sequence Contig-U14964-1

gslh*yn*li**nlisslf*kiinltlffkycficnqki**krde*n**kphf*k**k*k
nqsnnknyc*sl*kqstkknrttn*k*kifirkks*i**mdfisncnfitiycrfiicme
yl**tsgwsnfw**k*rngtlhilccilflw*clfnigsgfg*nwsyeinvywfyiircw
sffncswnlhksnlaslywlwgiwwfghgyllhwscfnitkmvsgs*rfssgfgcmwiwc
wlncfwfntnknnckgwscikfrsvgviifryiifnfiyf*ntttkfss*w*rf*sk*ik
rklr*ri*y**rn*itdiinr*k*y***sl*e**nifiisitinh***itrktsttk*nw
iii*kcyy*n*krt*ifrlfii*cnyiirvynylfnvfl*chiwsgcnwkik*YVPIKII
ARVGLALNFVVLGSLFFGILFSISFIFRTPPPNFQVNGKDSDQNRLKENSDEESNINEGT
ESPTSSIDKNNINNKVCKNDEISSSSVSQSTTDDKLPEKHQQQNEIGSSSENVIIKTKKE
PKFSDYLLSDAITSSEYTIIYLMFFCNVIFGVVAIGRLSDMCQNMFGKSKVVGSMVVSVN
GAFNLFGRLMFGFVSDKFGRKKCYIAMLTIQCFSVGFLIKAMKDLNYEAFIGLIWISTLC
YGGSFGVIPAFLNDMFGSKNVGATHGLILSAWALAGVGGGIAFSFIYNDLINNHGYGHHS
AYPYLVNYYWIVGFICVGWVLVWFIRTTVPEVFLPPIKGQILRIRIFNRYLRISKSKGFE
LLTNQQFKQEWDNYLNCLIKIYKKRIKKLDFFKF*kkkkkkkkkkkkkkkkkkkk

Homology Contig-U14964-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U14964-1 (Contig-U14964-1Q) /CSM_Contig/Conti...  2087  0.0
Contig-U12616-1 (Contig-U12616-1Q) /CSM_Contig/Conti...    48  7e-05
Contig-U15783-1 (Contig-U15783-1Q) /CSM_Contig/Conti...    46  3e-04
Contig-U14349-1 (Contig-U14349-1Q) /CSM_Contig/Conti...    46  3e-04
Contig-U13459-1 (Contig-U13459-1Q) /CSM_Contig/Conti...    44  0.001
Contig-U16168-1 (Contig-U16168-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U14187-1 (Contig-U14187-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U12231-1 (Contig-U12231-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U00078-1 (Contig-U00078-1Q) /CSM_Contig/Conti...    42  0.004
Contig-U15648-1 (Contig-U15648-1Q) /CSM_Contig/Conti...    40  0.016

Homology Contig-U14964-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ407673) Dictyostelium discoideum cDNA clone:dds43d11, 3' ...  1439   0.0    2
(BJ376353) Dictyostelium discoideum cDNA clone:ddc28m04, 3' ...  1415   0.0    1
(BJ346553) Dictyostelium discoideum cDNA clone:dda24e12, 3' ...  1368   0.0    2
(BJ401027) Dictyostelium discoideum cDNA clone:dds15i23, 3' ...  1362   0.0    2
(C89978) Dictyostelium discoideum slug cDNA, clone SSG721.       1328   0.0    1
(BJ375101) Dictyostelium discoideum cDNA clone:ddc17o12, 3' ...  1318   0.0    3
(BJ345114) Dictyostelium discoideum cDNA clone:dda21m13, 3' ...  1106   0.0    2
(AU038359) Dictyostelium discoideum slug cDNA, clone SSH613.     1005   0.0    2
(BJ391266) Dictyostelium discoideum cDNA clone:dds15i23, 5' ...   672   0.0    2
(BJ407674) Dictyostelium discoideum cDNA clone:dds43d12, 3' ...   940   0.0    3

Homology Contig-U14964-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116984_163(AC116984|pid:none) Dictyostelium discoideum chromos...   688   0.0
AC116986_58(AC116986|pid:none) Dictyostelium discoideum chromoso...   228   8e-58
CP000569_886(CP000569|pid:none) Actinobacillus pleuropneumoniae ...   139   5e-31
CP001091_957(CP001091|pid:none) Actinobacillus pleuropneumoniae ...   137   2e-30
AM260480_1442(AM260480|pid:none) Ralstonia eutropha H16 chromoso...   136   4e-30
AM421808_1201(AM421808|pid:none) Neisseria meningitidis serogrou...   135   6e-30
AE017143_951(AE017143|pid:none) Haemophilus ducreyi strain 35000...   135   7e-30
CP001050_1252(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945...   135   9e-30
CU633750_1677(CU633750|pid:none) Cupriavidus taiwanensis str. LM...   135   9e-30
A81850(A81850) probable integral membrane transporter NMA1574 [i...   134   2e-29