Homology Contig-U14690-1 vs DNA
Query= Contig-U14690-1 (Contig-U14690-1Q) /CSM_Contig/Contig-U14690-1Q.Seq.d
(1088 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU062069) Dictyostelium discoideum slug cDNA, clone SLH463. 412 0.0 3
(BJ435130) Dictyostelium discoideum cDNA clone:ddv26n06, 3' ... 331 0.0 3
(AU060726) Dictyostelium discoideum slug cDNA, clone SLB247. 729 0.0 1
(BJ371191) Dictyostelium discoideum cDNA clone:ddc57d04, 5' ... 722 0.0 1
(C90689) Dictyostelium discoideum slug cDNA, clone SSJ626. 640 e-179 1
(AU062011) Dictyostelium discoideum slug cDNA, clone SLH201. 412 e-151 2
(C92860) Dictyostelium discoideum slug cDNA, clone SSF514. 412 e-144 3
(BJ389121) Dictyostelium discoideum cDNA clone:dds17h13, 5' ... 331 e-138 3
(C90590) Dictyostelium discoideum slug cDNA, clone SSI817. 301 e-111 5
(BJ386059) Dictyostelium discoideum cDNA clone:ddc57d04, 3' ... 323 e-108 4
(BJ399458) Dictyostelium discoideum cDNA clone:dds6h01, 3' e... 224 e-105 4
(BJ402862) Dictyostelium discoideum cDNA clone:dds18b17, 3' ... 291 e-103 5
(AU039050) Dictyostelium discoideum slug cDNA, clone SSM322. 236 3e-94 5
(AU033630) Dictyostelium discoideum slug cDNA, clone SLB247. 246 5e-89 5
(AU073158) Dictyostelium discoideum slug cDNA, clone SSG278. 307 5e-79 1
(AU072910) Dictyostelium discoideum slug cDNA, clone SSF389. 307 5e-79 1
(AU074094) Dictyostelium discoideum slug cDNA, clone SSJ508. 291 3e-74 1
(AU073756) Dictyostelium discoideum slug cDNA, clone SSI288. 291 3e-74 1
(AU072884) Dictyostelium discoideum slug cDNA, clone SSF312. 285 2e-72 1
(AU072946) Dictyostelium discoideum slug cDNA, clone SSF514. 210 9e-50 1
(BJ428990) Dictyostelium discoideum cDNA clone:ddv2a02, 3' e... 117 7e-34 3
(C84751) Dictyostelium discoideum slug cDNA, clone SSF312. 98 8e-33 6
(BJ402646) Dictyostelium discoideum cDNA clone:dds17h13, 3' ... 88 2e-26 4
(AU071771) Dictyostelium discoideum slug cDNA, clone SSC490. 70 2e-07 1
(GR571064) CBTG1663.b1 CBTG Dictyostelium purpureum 12 hr ve... 32 0.009 4
(AC125471) Oryza sativa Japonica Group chromosome 3 clone OS... 50 0.19 1
(AC121489) Oryza sativa Japonica Group chromosome 3 clone OJ... 50 0.19 1
(EA707246) Sequence 86125 from patent US 7365185. 50 0.19 1
(AC210479) Oryza glaberrima clone OG_BBa0067A06, *** SEQUENC... 50 0.19 1
(CW687448) OG_BBa0046G11.f OG_BBa Oryza glaberrima genomic c... 50 0.19 1
(CW665342) OG_BBa0019O07.f OG_BBa Oryza glaberrima genomic c... 50 0.19 1
(CL838710) OR_CBa0065A24.r OR_CBa Oryza rufipogon genomic cl... 50 0.19 1
(CL752232) OR_BBa0118O22.r OR_BBa Oryza nivara genomic clone... 50 0.19 1
(CL715655) OR_BBa0041J14.r OR_BBa Oryza nivara genomic clone... 50 0.19 1
(AG020923) Oryza sativa Japonica Group DNA, clone:H0211_1_30... 50 0.19 1
(AC149463) Papio anubis clone RP41-451J22, WORKING DRAFT SEQ... 40 0.62 6
(EV419798) 210780524 NGP Nasonia giraulti cDNA clone 178G7 3... 46 0.67 2
(AU053449) Dictyostelium discoideum slug cDNA, clone SLI672. 48 0.75 1
(EK215196) 1095460116354 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.77 2
(AC234359) Solanum lycopersicum chromosome 9 clone C09SLe003... 38 1.6 5
(FN357428) Schistosoma mansoni genome sequence supercontig S... 38 1.9 9
(AM440871) Vitis vinifera contig VV78X118951.31, whole genom... 46 3.0 1
(FI304565) AdH1163-CPY2-I16TF AdH1 Arachis duranensis genomi... 46 3.0 1
(EI075533) hgx0013ag07.g1 hgx Oryza minuta genomic clone hgx... 46 3.0 1
(DU679894) Bst012430 lambda03 Boechera stricta genomic clone... 46 3.0 1
(CZ623970) OM__Ba0162B03.r OM__Ba Oryza minuta genomic clone... 46 3.0 1
(ES619898) NGPD991TR NGPA Nasonia giraulti cDNA, mRNA sequence. 46 3.0 1
(AC234695) Solanum lycopersicum chromosome 9 clone C09HBa017... 38 3.8 4
(GR581974) CBZZ1796.g1 CBZZ Dictyostelium purpureum 18 hr st... 32 4.4 3
(GR571065) CBTG1663.g1 CBTG Dictyostelium purpureum 12 hr ve... 32 4.7 3
(ER482330) 1093015272125 Global-Ocean-Sampling_GS-35-01-01-1... 34 7.5 2
(AE015450) Mycoplasma gallisepticum strain R complete genome. 34 8.5 16
(EY343655) CAWZ12625.fwd CAWZ Helobdella robusta Primary Lat... 42 9.9 2
>(AU062069) Dictyostelium discoideum slug cDNA, clone SLH463.
Length = 535
Score = 412 bits (208), Expect(3) = 0.0
Identities = 208/208 (100%)
Strand = Plus / Plus
Query: 738 aaagtcacattaaccaataatgaaagttcaccaattaaatcaattgaaattcattctgat 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 aaagtcacattaaccaataatgaaagttcaccaattaaatcaattgaaattcattctgat 336
Query: 798 aattggaatccaactgaattttggaatattgtaagaagtcaaaaaactggtaatttaagt 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aattggaatccaactgaattttggaatattgtaagaagtcaaaaaactggtaatttaagt 396
Query: 858 ttcccaccatttgttgttaatcttcaagctggcgattctttctcatttggttttgtatct 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ttcccaccatttgttgttaatcttcaagctggcgattctttctcatttggttttgtatct 456
Query: 918 gcaactttaaatccatcattttcaactg 945
||||||||||||||||||||||||||||
Sbjct: 457 gcaactttaaatccatcattttcaactg 484
Score = 274 bits (138), Expect(3) = 0.0
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 461 cttagattaaaacaaactaatactcaacttacttgtaatggtaatgttggtttcttcaat 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttagattaaaacaaactaatactcaacttacttgtaatggtaatgttggtttcttcaat 60
Query: 521 ttaaataacttttattatacagttgcattaaaatcatatgatacatgtccaaaacttaat 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaaataacttttattatacagttgcattaaaatcatatgatacatgtccaaaacttaat 120
Query: 581 tatggtgaaccttgtaat 598
||||||||||||||||||
Sbjct: 121 tatggtgaaccttgtaat 138
Score = 155 bits (78), Expect(3) = 0.0
Identities = 78/78 (100%)
Strand = Plus / Plus
Query: 662 ggaacaccaaaaatcaattataaattagatactgatagtaattgggtagccaatggtgta 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaacaccaaaaatcaattataaattagatactgatagtaattgggtagccaatggtgta 261
Query: 722 acatattatcaatataaa 739
||||||||||||||||||
Sbjct: 262 acatattatcaatataaa 279
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,027,802,858
Number of extensions: 60644669
Number of successful extensions: 4749716
Number of sequences better than 10.0: 55
Length of query: 1088
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1064
Effective length of database: 104,103,628,548
Effective search space: 110766260775072
Effective search space used: 110766260775072
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home