Dictyostelium discoideum cDNA Contig-U14638-1

Assembled

Chromosomal Location of Contig-U14638-1

Sequence Contig-U14638-1

TTTGAATCTG GTTCTATGCC ATACGCTCAA CAACATTATC CATTTGAAAA
TAAGGATAAA TTTGAAAAGA TCTTCCCAGC TCACTTTATC GCCGAAGGTC
TTGATCAAAC TAGAGGTTGG TTCTATACAC TATTGGTTTT ATCAACTGCT
CTCTTTGATA AACCACCTTT CCAAAATCTC ATTGTTAATG GTTTGGTTTT
AGCTGCTGAT GGTAAGAAAA TGTCAAAGAG ATTAAAGAAT TATCCAGATC
CAATGGAAGT CGTATCAAAG GTTGGTGCTG ATTCTCTTCG TCTCTACCTT
ATCAATTCAC CAGTTGTTAG AGCTGAAACT TTGAAATTCC AAGAGAAAGG
TGTTCAAGAT ATGATCAAAG ATGTTTTCTT ACCATGGTTT AACGCCTATC
GTTTCTTTGT TCAAAATTGT CTTCGTTTTG AAAAAGCTAC CAACACCACT
TTCCAACCAG ATATTAAGGT TGCTCTTGCC TCTGAAAATG TTATGGACAA
ATGGATTCTT GCCTCTTGCC AATCACTCAT TGCATTTGTA CGTGCAGAAA
TGGCCGCCTA TCGTTTATAC ACTGTCGTAC CAAAATTGGT TCGTTTCATT
GAAGATCTTA CCAATNNNNN NNNN

Translated Amino Acid Sequence Contig-U14638-1

FESGSMPYAQQHYPFENKDKFEKIFPAHFIAEGLDQTRGWFYTLLVLSTALFDKPPFQNL
IVNGLVLAADGKKMSKRLKNYPDPMEVVSKVGADSLRLYLINSPVVRAETLKFQEKGVQD
MIKDVFLPWFNAYRFFVQNCLRFEKATNTTFQPDIKVALASENVMDKWILASCQSLIAFV
RAEMAAYRLYTVVPKLVRFIEDLTNXXX

Homology Contig-U14638-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U14638-1 (Contig-U14638-1Q) /CSM_Contig/Conti...  1219  0.0
Contig-U11467-1 (Contig-U11467-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U13304-1 (Contig-U13304-1Q) /CSM_Contig/Conti...    36  0.044
Contig-U12307-1 (Contig-U12307-1Q) /CSM_Contig/Conti...    34  0.17
Contig-U11391-1 (Contig-U11391-1Q) /CSM_Contig/Conti...    34  0.17
Contig-U12327-1 (Contig-U12327-1Q) /CSM_Contig/Conti...    32  0.68
Contig-U11671-1 (Contig-U11671-1Q) /CSM_Contig/Conti...    32  0.68
Contig-U11242-1 (Contig-U11242-1Q) /CSM_Contig/Conti...    32  0.68
Contig-U11105-1 (Contig-U11105-1Q) /CSM_Contig/Conti...    32  0.68
Contig-U09772-1 (Contig-U09772-1Q) /CSM_Contig/Conti...    32  0.68

Homology Contig-U14638-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ396416) Dictyostelium discoideum cDNA clone:dds42i23, 5' ...  1219   0.0    1
(DY885770) CeleSEQ1197 Cunninghamella elegans pBluescript (E...   149   4e-41  2
(DY891914) CeleSEQ8669 Cunninghamella elegans pBluescript (E...   149   2e-39  2
(AM656515) Entamoeba moshkovskii FIC GSS, clone mosh042e01.q1k.    90   4e-30  4
(EC825043) SME00001618 esmbsro2 Sawyeria marylandensis cDNA,...    78   1e-27  3
(AM660147) Entamoeba moshkovskii FIC GSS, clone mosh096c05.q1k.    90   1e-26  3
(AZ690200) ENTHQ70TF Entamoeba histolytica Sheared DNA Entam...    88   3e-26  4
(AZ548152) ENTDT83TR Entamoeba histolytica Sheared DNA Entam...    88   3e-26  4
(AB092423) Entamoeba histolytica gene for isoleucyl tRNA syn...    88   6e-25  4
(BH135214) ENTOK11TF Entamoeba histolytica Sheared DNA Entam...    88   9e-25  3

Homology Contig-U14638-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


BC065552_1(BC065552|pid:none) Homo sapiens isoleucine-tRNA synth...   294   1e-78
(P41252) RecName: Full=Isoleucyl-tRNA synthetase, cytoplasmic;  ...   294   1e-78
BX537417_1(BX537417|pid:none) Homo sapiens mRNA; cDNA DKFZp686L0...   294   1e-78
AB209234_1(AB209234|pid:none) Homo sapiens mRNA for Isoleucyl-tR...   294   1e-78
U04953_1(U04953|pid:none) Human isoleucyl-tRNA synthetase mRNA, ...   294   1e-78
(Q21926) RecName: Full=Isoleucyl-tRNA synthetase, cytoplasmic;  ...   293   2e-78
BC064686_1(BC064686|pid:none) Xenopus laevis hypothetical protei...   290   3e-77
CP000498_238(CP000498|pid:none) Pichia stipitis CBS 6054 chromos...   281   1e-74
AE014296_3874(AE014296|pid:none) Drosophila melanogaster chromos...   279   5e-74
CR382133_256(CR382133|pid:none) Debaryomyces hansenii strain CBS...   278   9e-74