Homology Contig-U14601-1 vs Protein

Query= Contig-U14601-1 (Contig-U14601-1Q) /CSM_Contig/Contig-U14601-1Q.Seq.d
         (610 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q1ZXD6) RecName: Full=Probable serine/threonine-protein kinase ...   159   8e-38

>(Q1ZXD6) RecName: Full=Probable serine/threonine-protein kinase
           roco5;          EC=2.7.11.1; AltName: Full=Ras of
           complex proteins and C-terminal of roc 5;
          Length = 2800

 Score =  159 bits (401), Expect = 8e-38
 Identities = 89/143 (62%), Positives = 89/143 (62%)
 Frame = +1

Query: 121 GGLFSIVGGWVGNLTEXXXXXXXXXSSVSAQSTAEANAILLNPTTQENHKKAMDFWVXXX 300
           GGLFSIVGGWVGNLTE         SSVSAQSTAEANAILLNPTTQENHKKAMDFWV
Sbjct: 61  GGLFSIVGGWVGNLTEPTPPPPPPPSSVSAQSTAEANAILLNPTTQENHKKAMDFWVTNT 120

Query: 301 XXXXXXXXXXXXXXIPSLVSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETVKINVTS 480
                         IPSLVSVQ                            KETVKINVTS
Sbjct: 121 STTTTTTTTTSSNNIPSLVSVQNNNTSNNNINNNNKTSNTTGSNVSSSNNKETVKINVTS 180

Query: 481 LDSGGNNNASGKDISNEHSPKNR 549
           LDSGGNNNASGKDISNEHSPKNR
Sbjct: 181 LDSGGNNNASGKDISNEHSPKNR 203

Lambda     K      H
   0.306    0.123    0.345

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 358,679,538
Number of extensions: 3180528
Number of successful extensions: 4392
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4389
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 1,051,180,864
Length adjustment: 122
Effective length of query: 81
Effective length of database: 656,320,666
Effective search space: 53161973946
Effective search space used: 53161973946
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 30 (16.2 bits)




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