Homology Contig-U14601-1 vs Protein
Query= Contig-U14601-1 (Contig-U14601-1Q) /CSM_Contig/Contig-U14601-1Q.Seq.d
(610 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q1ZXD6) RecName: Full=Probable serine/threonine-protein kinase ... 159 8e-38
>(Q1ZXD6) RecName: Full=Probable serine/threonine-protein kinase
roco5; EC=2.7.11.1; AltName: Full=Ras of
complex proteins and C-terminal of roc 5;
Length = 2800
Score = 159 bits (401), Expect = 8e-38
Identities = 89/143 (62%), Positives = 89/143 (62%)
Frame = +1
Query: 121 GGLFSIVGGWVGNLTEXXXXXXXXXSSVSAQSTAEANAILLNPTTQENHKKAMDFWVXXX 300
GGLFSIVGGWVGNLTE SSVSAQSTAEANAILLNPTTQENHKKAMDFWV
Sbjct: 61 GGLFSIVGGWVGNLTEPTPPPPPPPSSVSAQSTAEANAILLNPTTQENHKKAMDFWVTNT 120
Query: 301 XXXXXXXXXXXXXXIPSLVSVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETVKINVTS 480
IPSLVSVQ KETVKINVTS
Sbjct: 121 STTTTTTTTTSSNNIPSLVSVQNNNTSNNNINNNNKTSNTTGSNVSSSNNKETVKINVTS 180
Query: 481 LDSGGNNNASGKDISNEHSPKNR 549
LDSGGNNNASGKDISNEHSPKNR
Sbjct: 181 LDSGGNNNASGKDISNEHSPKNR 203
Lambda K H
0.306 0.123 0.345
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 358,679,538
Number of extensions: 3180528
Number of successful extensions: 4392
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4389
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 1,051,180,864
Length adjustment: 122
Effective length of query: 81
Effective length of database: 656,320,666
Effective search space: 53161973946
Effective search space used: 53161973946
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 30 (16.2 bits)
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