Homology Contig-U14599-1 vs Protein
Query= Contig-U14599-1 (Contig-U14599-1Q) /CSM_Contig/Contig-U14599-1Q.Seq.d
(604 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q6XHA7) RecName: Full=Probable serine/threonine-protein kinase ... 373 e-102
T27958(T27958;T27973)hypothetical protein ZK669.1a - Caenorhabdi... 50 6e-05
T27959(T27959;T27974)hypothetical protein ZK669.1b - Caenorhabdi... 50 6e-05
AY085460_1(AY085460|pid:none) Arabidopsis thaliana clone 152557 ... 49 8e-05
AK063998_1(AK063998|pid:none) Oryza sativa Japonica Group cDNA c... 49 8e-05
(Q3E875) RecName: Full=Uncharacterized Rho GTPase-activating pro... 49 8e-05
AY634313_1(AY634313|pid:none) Xenopus laevis clone 904-4 D7 shir... 48 2e-04
BC169939_1(BC169939|pid:none) Xenopus laevis shirin, mRNA (cDNA ... 48 2e-04
BC157467_1(BC157467|pid:none) Xenopus laevis cDNA clone IMAGE:40... 48 2e-04
BC169942_1(BC169942|pid:none) Xenopus laevis shirin, mRNA (cDNA ... 48 2e-04
CR942686_1(CR942686|pid:none) Xenopus tropicalis finished cDNA, ... 47 4e-04
(Q63744) RecName: Full=Rho GTPase-activating protein 7; AltName:... 44 0.003
BT039017_1(BT039017|pid:none) Zea mays full-length cDNA clone ZM... 44 0.003
D31962_1(D31962|pid:none) Rat mRNA for RhoGAP, complete cds. 44 0.003
BC089149_1(BC089149|pid:none) Xenopus laevis hypothetical protei... 44 0.005
AB208792_1(AB208792|pid:none) Homo sapiens mRNA for Rho GTPase a... 43 0.006
AF022212_1(AF022212|pid:none) Homo sapiens Rho GTPase activating... 43 0.006
BC150635_1(BC150635|pid:none) Homo sapiens Rho GTPase activating... 43 0.006
AK293078_1(AK293078|pid:none) Homo sapiens cDNA FLJ77478 complet... 43 0.006
AF117067_1(AF117067|pid:none) Homo sapiens rho-type GTPase-activ... 43 0.006
BC151638_1(BC151638|pid:none) Bos taurus deleted in liver cancer... 43 0.006
AK297713_1(AK297713|pid:none) Homo sapiens cDNA FLJ59725 complet... 43 0.006
AK303444_1(AK303444|pid:none) Homo sapiens cDNA FLJ55566 complet... 43 0.006
BC070822_1(BC070822|pid:none) Xenopus laevis hypothetical protei... 43 0.008
BC044312_1(BC044312|pid:none) Xenopus laevis hypothetical protei... 43 0.008
(Q5VT97) RecName: Full=Rho GTPase-activating protein SYDE2; AltN... 43 0.008
AK162413_1(AK162413|pid:none) Mus musculus adult male diencephal... 42 0.010
AK166015_1(AK166015|pid:none) Mus musculus lung RCB-0558 LLC cDN... 42 0.013
AL663026_3(AL663026|pid:none) Mouse DNA sequence from clone RP23... 42 0.013
AF012273_1(AF012273|pid:none) Mus musculus rho-type GTPase-activ... 42 0.013
AK048162_1(AK048162|pid:none) Mus musculus 16 days embryo head c... 42 0.013
(O54834) RecName: Full=Rho GTPase-activating protein 6; AltName:... 42 0.013
AY891643_1(AY891643|pid:none) Synthetic construct Homo sapiens c... 42 0.017
AK298562_1(AK298562|pid:none) Homo sapiens cDNA FLJ60782 complet... 42 0.017
(Q07960) RecName: Full=Rho GTPase-activating protein 1; AltName:... 42 0.017
BC154705_1(BC154705|pid:none) Xenopus tropicalis hypothetical pr... 42 0.017
AL691489_9(AL691489|pid:none) Mouse DNA sequence from clone RP23... 41 0.022
AK079048_1(AK079048|pid:none) Mus musculus adult male diencephal... 41 0.022
(Q5FWK3) RecName: Full=Rho GTPase-activating protein 1; AltName:... 41 0.022
AK084622_1(AK084622|pid:none) Mus musculus 13 days embryo heart ... 41 0.022
AE014135_54(AE014135|pid:none) Drosophila melanogaster chromosom... 41 0.022
AK046291_1(AK046291|pid:none) Mus musculus adult male corpora qu... 41 0.022
EU832224_1(EU832224|pid:none) Synthetic construct Homo sapiens c... 41 0.029
AB051510_1(AB051510|pid:none) Homo sapiens mRNA for KIAA1723 pro... 41 0.029
(Q9PT60) RecName: Full=RalA-binding protein 1-A; Short=... 41 0.029
BC054511_1(BC054511|pid:none) Homo sapiens deleted in liver canc... 41 0.029
AB384275_1(AB384275|pid:none) Synthetic construct DNA, clone: pF... 41 0.029
BC070617_1(BC070617|pid:none) Xenopus laevis hypothetical protei... 41 0.029
AK291682_1(AK291682|pid:none) Homo sapiens cDNA FLJ78668 complet... 41 0.029
AF026219_1(AF026219|pid:none) Homo sapiens HP protein (HP) mRNA,... 41 0.029
AK299049_1(AK299049|pid:none) Homo sapiens cDNA FLJ59738 complet... 41 0.029
(Q54C77) RecName: Full=Probable inactive serine/threonine-protei... 40 0.038
AJ252165_1(AJ252165|pid:none) Xenopus laevis partial mRNA for Ra... 40 0.038
BC079089_1(BC079089|pid:none) Rattus norvegicus Rho GTPase activ... 40 0.038
BC076733_1(BC076733|pid:none) Xenopus laevis Rho GTPase activati... 40 0.050
AF035119_1(AF035119|pid:none) Homo sapiens deleted in liver canc... 40 0.065
BC027830_1(BC027830|pid:none) Mus musculus StAR-related lipid tr... 40 0.065
AK136202_1(AK136202|pid:none) Mus musculus in vitro fertilized e... 40 0.065
(Q923Q2) RecName: Full=StAR-related lipid transfer protein 13; A... 40 0.065
(Q3KRB8) RecName: Full=Rho GTPase-activating protein 11B; AltNam... 39 0.085
BC151396_1(BC151396|pid:none) Bos taurus StAR-related lipid tran... 39 0.15
AK095114_1(AK095114|pid:none) Homo sapiens cDNA FLJ37795 fis, cl... 39 0.15
BX005476_1(BX005476|pid:none) Zebrafish DNA sequence from clone ... 39 0.15
AK133927_1(AK133927|pid:none) Mus musculus 8 days embryo whole b... 39 0.15
(Q8K031) RecName: Full=StAR-related lipid transfer protein 8; Al... 39 0.15
AL139187_1(AL139187|pid:none) Human DNA sequence from clone RP11... 39 0.15
AK091804_1(AK091804|pid:none) Homo sapiens cDNA FLJ34485 fis, cl... 39 0.15
AY366448_1(AY366448|pid:none) Homo sapiens chromosome 13 Rho GTP... 39 0.15
(Q86XT1) RecName: Full=StAR-related lipid transfer protein 13; A... 39 0.15
BX647695_1(BX647695|pid:none) Homo sapiens mRNA; cDNA DKFZp686I0... 39 0.15
BT031104_1(BT031104|pid:none) Drosophila melanogaster IP11791 fu... 38 0.25
AM989983_21(AM989983|pid:none) Zygosaccharomyces rouxii strain C... 38 0.25
AY075440_1(AY075440|pid:none) Drosophila melanogaster RE02250 fu... 38 0.25
(Q92502) RecName: Full=StAR-related lipid transfer protein 8; Al... 38 0.25
CR749411_1(CR749411|pid:none) Homo sapiens mRNA; cDNA DKFZp686H1... 38 0.25
BC081352_1(BC081352|pid:none) Xenopus tropicalis Rho GTPase acti... 37 0.32
AJ306731_1(AJ306731|pid:none) Homo sapiens mRNA for RhoGAP prote... 37 0.42
AB060553_1(AB060553|pid:none) Mus musculus mRNA for Nadrin1, com... 37 0.42
AY094969_1(AY094969|pid:none) Drosophila melanogaster SD08167 fu... 37 0.42
AB042827_1(AB042827|pid:none) Rattus norvegicus mRNA for Nadrin,... 37 0.42
AJ304845_1(AJ304845|pid:none) Xenopus laevis partial mRNA for Ra... 37 0.42
BC003259_1(BC003259|pid:none) Mus musculus Rho GTPase activating... 37 0.42
AE014298_2622(AE014298|pid:none) Drosophila melanogaster chromos... 37 0.42
(Q99N37) RecName: Full=Rho GTPase-activating protein 17; AltName... 37 0.42
(Q9BVF6) RecName: Full=Rho GTPase-activating protein 17; AltName... 37 0.42
AK027567_1(AK027567|pid:none) Homo sapiens cDNA FLJ14661 fis, cl... 37 0.42
AB080637_1(AB080637|pid:none) Rattus norvegicus mRNA for Nadrin-... 37 0.42
BC066523_1(BC066523|pid:none) Danio rerio zgc:76867, mRNA (cDNA ... 37 0.42
AB060554_1(AB060554|pid:none) Mus musculus mRNA for Nadrin2, com... 37 0.42
AB290183_1(AB290183|pid:none) Homo sapiens mRNA for MYO9A varian... 37 0.55
(Q9NUY2) RecName: Full=Myosin-IXa; AltName: Full=Unconventional ... 37 0.55
AK029836_1(AK029836|pid:none) Mus musculus adult male testis cDN... 37 0.55
AF117888_1(AF117888|pid:none) Homo sapiens myosin-IXa mRNA, comp... 37 0.55
AK001923_1(AK001923|pid:none) Homo sapiens cDNA FLJ11061 fis, cl... 37 0.55
(Q9Z1N3) RecName: Full=Myosin-IXa; AltName: Full=Unconventional ... 37 0.55
BC059382_1(BC059382|pid:none) Homo sapiens Rho GTPase activating... 36 0.72
BC160606_1(BC160606|pid:none) Danio rerio zgc:158426, mRNA (cDNA... 36 0.72
AK022305_1(AK022305|pid:none) Homo sapiens cDNA FLJ12243 fis, cl... 36 0.72
BC166229_1(BC166229|pid:none) Xenopus tropicalis hypothetical pr... 36 0.72
AL355192_1(AL355192|pid:none) Novel human gene mapping to chomos... 35 1.2
AF195968_1(AF195968|pid:none) Homo sapiens rho GTPase activating... 35 1.2
BC010490_1(BC010490|pid:none) Homo sapiens Rho GTPase activating... 35 1.2
BC048280_1(BC048280|pid:none) Homo sapiens Rho GTPase activating... 35 1.2
AL772405_5(AL772405|pid:none) Mouse DNA sequence from clone RP23... 35 1.6
BX842635_27(BX842635|pid:none) Neurospora crassa DNA linkage gro... 35 1.6
Z83838_5(Z83838|pid:none) Human DNA sequence from clone RP1-127B... 35 1.6
T15220(T15220)hypothetical protein F57C9.8 - Caenorhabditis eleg... 35 1.6
AL772405_4(AL772405|pid:none) Mouse DNA sequence from clone RP23... 35 1.6
(Q80Y19) RecName: Full=Rho GTPase-activating protein 11A; AltNam... 35 1.6
CR380949_230(CR380949|pid:none) Candida glabrata strain CBS138 c... 35 1.6
AK129034_1(AK129034|pid:none) Mus musculus mRNA for mKIAA0013 pr... 35 1.6
AB007925_1(AB007925|pid:none) Homo sapiens mRNA for KIAA0456 pro... 35 2.1
AK293335_1(AK293335|pid:none) Homo sapiens cDNA FLJ61210 complet... 35 2.1
BC132872_1(BC132872|pid:none) Homo sapiens SLIT-ROBO Rho GTPase ... 35 2.1
AE010299_3604(AE010299|pid:none) Methanosarcina acetivorans str.... 35 2.1
(O75044) RecName: Full=SLIT-ROBO Rho GTPase-activating protein 2... 35 2.1
BC144343_1(BC144343|pid:none) Homo sapiens SLIT-ROBO Rho GTPase ... 35 2.1
AL670305_3(AL670305|pid:none) Mouse DNA sequence from clone RP23... 34 2.7
AL670305_2(AL670305|pid:none) Mouse DNA sequence from clone RP23... 34 2.7
CR382139_516(CR382139|pid:none) Debaryomyces hansenii strain CBS... 34 2.7
CU928176_477(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 34 2.7
CP001575_325(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 34 2.7
BC168690_1(BC168690|pid:none) Rattus norvegicus SLIT-ROBO Rho GT... 34 3.6
BC066588_1(BC066588|pid:none) Danio rerio zgc:77004, mRNA (cDNA ... 34 3.6
BC000277_1(BC000277|pid:none) Homo sapiens Rho GTPase-activating... 33 4.7
AB079856_1(AB079856|pid:none) Homo sapiens grit mRNA for Rho GTP... 33 4.7
(A7KAX9) RecName: Full=Rho/Cdc42/Rac GTPase-activating protein R... 33 4.7
FN357486_9(FN357486|pid:none) Schistosoma mansoni genome sequenc... 33 6.1
AE016819_849(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 33 6.1
CP000758_670(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188... 33 6.1
FN357904_4(FN357904|pid:none) Schistosoma mansoni genome sequenc... 33 8.0
AK122276_1(AK122276|pid:none) Mus musculus mRNA for mKIAA0411 pr... 33 8.0
AF270756_1(AF270756|pid:none) Penaea mucronata NADH dehydrogenas... 33 8.0
AM270339_38(AM270339|pid:none) Aspergillus niger contig An15c012... 33 8.0
AM235399_1(AM235399|pid:none) Penaea cneorum subsp. cneorum chlo... 33 8.0
AM235402_1(AM235402|pid:none) Penaea cneorum subsp. ovata chloro... 33 8.0
>(Q6XHA7) RecName: Full=Probable serine/threonine-protein kinase
roco9; EC=2.7.11.1; AltName: Full=Ras of
complex proteins and C-terminal of roc 9;
&AY232271_1(AY232271|pid:none)
Length = 3365
Score = 373 bits (957), Expect = e-102
Identities = 183/197 (92%), Positives = 183/197 (92%)
Frame = +3
Query: 3 KSSKLKHIYNSLKFKSLKTEXXXXXXXXXXXXXXFEFIMPNTPLPIFDQQSPPIHFYNSN 182
KSSKLKHIYNSLKFKSLKTE FEFIMPNTPLPIFDQQSPPIHFYNSN
Sbjct: 174 KSSKLKHIYNSLKFKSLKTEKNGSSSSIKSNISNFEFIMPNTPLPIFDQQSPPIHFYNSN 233
Query: 183 QFSDFQYFGTPLYSLIKRQDNGLSIPILLEKSISFLEGHCHVEDLFFRKYNNEKVKFMRN 362
QFSDFQYFGTPLYSLIKRQDNGLSIPILLEKSISFLEGHCHVEDLFFRKYNNEKVKFMRN
Sbjct: 234 QFSDFQYFGTPLYSLIKRQDNGLSIPILLEKSISFLEGHCHVEDLFFRKYNNEKVKFMRN 293
Query: 363 SFERTGDFNFYYPDPQDPYDVAALLVEFIASLPDQLLNVELYNAIKNHTSALNSQYGGYW 542
SFERTGDFNFYYPDPQDPYDVAALLVEFIASLPDQLLNVELYNAIKNHTSALNSQYGGYW
Sbjct: 294 SFERTGDFNFYYPDPQDPYDVAALLVEFIASLPDQLLNVELYNAIKNHTSALNSQYGGYW 353
Query: 543 DIQYLAQKLSVESREFL 593
DIQYLAQKLSVESREFL
Sbjct: 354 DIQYLAQKLSVESREFL 370
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 803,975,615
Number of extensions: 15782271
Number of successful extensions: 38767
Number of sequences better than 10.0: 136
Number of HSP's gapped: 38709
Number of HSP's successfully gapped: 136
Length of query: 201
Length of database: 1,051,180,864
Length adjustment: 122
Effective length of query: 79
Effective length of database: 656,320,666
Effective search space: 51849332614
Effective search space used: 51849332614
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
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