<Clone: Contig-U14599-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Contig-U14599-1
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Assembled
Chromosomal Location of Contig-U14599-1
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more Chromosomal info
>
| Chromosome Number |
5 |
| Length |
5062330 |
| Start Poin |
1,222,900 |
| End Point |
1,222,306 |
| Strand |
MINUS |
Sequence Contig-U14599-1
CAAAATCATC GAAACTAAAA CATATATATA ATTCATTAAA ATTTAAATCT
TTAAAAACTG AAAAGAATGG TTCATCATCA TCAATTAAAT CAAATATTTC
AAACTTTGAA TTTATAATGC CAAATACACC ATTACCAATA TTTGATCAAC
AATCACCACC TATTCATTTC TATAATAGTA ATCAGTTTTC AGATTTTCAA
TATTTTGGTA CACCATTATA TTCTTTAATC AAACGTCAAG ATAATGGTTT
ATCAATTCCA ATTTTATTAG AGAAATCAAT TTCATTTTTA GAAGGTCATT
GTCATGTTGA AGATTTATTC TTTAGAAAAT ATAATAATGA AAAAGTTAAA
TTTATGAGAA ATTCATTTGA AAGAACTGGT GATTTCAATT TCTATTATCC
AGATCCACAA GATCCCTATG ATGTAGCAGC TCTCTTGGTT GAATTCATTG
CATCTTTACC TGACCAATTA TTAAATGTTG AATTATATAA TGCTATTAAA
AATCATACTT CTGCTTTAAA CTCACAATAT GGTGGTTATT GGGATATTCA
ATATTTAGCA CAAAAATTAT CAGTAGAGTC TAGAGAATTT TTACANNNNN
NNNN
Translated Amino Acid Sequence Contig-U14599-1
<All Frames>
KSSKLKHIYNSLKFKSLKTEKNGSSSSIKSNISNFEFIMPNTPLPIFDQQSPPIHFYNSN
QFSDFQYFGTPLYSLIKRQDNGLSIPILLEKSISFLEGHCHVEDLFFRKYNNEKVKFMRN
SFERTGDFNFYYPDPQDPYDVAALLVEFIASLPDQLLNVELYNAIKNHTSALNSQYGGYW
DIQYLAQKLSVESREFLXXX
Homology Contig-U14599-1 vs CSM-Contig
<more CONTIG info>
Sequences producing significant alignments: (bits) Value
Contig-U14599-1 (Contig-U14599-1Q) /CSM_Contig/Conti... 1179 0.0
Contig-U10965-1 (Contig-U10965-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U14356-1 (Contig-U14356-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U13958-1 (Contig-U13958-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U13839-1 (Contig-U13839-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U13261-1 (Contig-U13261-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U10265-1 (Contig-U10265-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U00469-1 (Contig-U00469-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U13810-1 (Contig-U13810-1Q) /CSM_Contig/Conti... 36 0.042
Contig-U11780-1 (Contig-U11780-1Q) /CSM_Contig/Conti... 36 0.042
Homology Contig-U14599-1 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(BJ394674) Dictyostelium discoideum cDNA clone:dds36h02, 5' ... 1053 0.0 1
(AY232271) Dictyostelium discoideum putative protein Roco9 (... 472 0.0 3
(CR932087) Paramecium tetraurelia centrin-related protein gene. 46 0.012 3
(AC235904) Glycine max strain Williams 82 clone GM_WBc0179J0... 36 0.033 8
(CP000976) Borrelia duttonii Ly, complete genome. 36 0.037 14
(AC190095) Dasypus novemcinctus clone VMRC5-243H8, WORKING D... 50 0.10 1
(AC165213) Dasypus novemcinctus clone VMRC5-60N4, WORKING DR... 50 0.10 1
(AL844507) Plasmodium falciparum 3D7 chromosome 8. 40 0.15 16
(CP000993) Borrelia recurrentis A1, complete genome. 36 0.17 12
(AC201151) Strongylocentrotus purpuratus clone R3-14E9, WORK... 44 0.21 5
Homology Contig-U14599-1 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q6XHA7) RecName: Full=Probable serine/threonine-protein kinase ... 373 e-102
T27958(T27958;T27973)hypothetical protein ZK669.1a - Caenorhabdi... 50 6e-05
T27959(T27959;T27974)hypothetical protein ZK669.1b - Caenorhabdi... 50 6e-05
AY085460_1(AY085460|pid:none) Arabidopsis thaliana clone 152557 ... 49 8e-05
AK063998_1(AK063998|pid:none) Oryza sativa Japonica Group cDNA c... 49 8e-05
(Q3E875) RecName: Full=Uncharacterized Rho GTPase-activating pro... 49 8e-05
AY634313_1(AY634313|pid:none) Xenopus laevis clone 904-4 D7 shir... 48 2e-04
BC169939_1(BC169939|pid:none) Xenopus laevis shirin, mRNA (cDNA ... 48 2e-04
BC157467_1(BC157467|pid:none) Xenopus laevis cDNA clone IMAGE:40... 48 2e-04
BC169942_1(BC169942|pid:none) Xenopus laevis shirin, mRNA (cDNA ... 48 2e-04
<Clone: Contig-U14599-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home