Dictyostelium discoideum cDNA Contig-U14499-1

Assembled

Chromosomal Location of Contig-U14499-1

Sequence Contig-U14499-1

AAAAATACTA TCGATTTTAT NAAAATGAAA AAAGTTATCT TTTTATCTCT
AATTGTTTTT TTATGTTTAT TACTTTTACC TTCAAATGAT GCTCATTTAG
TAAATGATCC CACATTACCA GATTATATTG GTTTGGTTAG AGGTGGAATT
TGTAGTATTC CCAGTTTATG GTGCAGCCAT AGATTCTTGT TTATATTTTG
TATTCAATTT GTTTTATCCA AAACAACCAG AAGAACCAAA AGTAACAATG
AAAGAGTTTA ACGAAAGGAT GGAATTTATG GCAATAAGAT ATGAAAATCT
ATACCAATAG AGCCATTAAT GCAAGTGTTC TTCAAACATG CAGATATCAA
TTTAAAACTT TGAAAAAATC TTCAGATAAT TATATGGATA TGCTCAATAT
ATGGAAAAAA GAATTTGGTG CAACTGGTTT AACTACAGAA GAAACTAAAA
ACAATTTACC ACCAGTGTTT TATGTTTTTT TAAGTAAATT GNAAGATTGT
TNNATACAAT TTGCAGATCC AACTNGNATT AGCCTGNNAG CCAAATTGTA
TATTGATACN GCAGTNTTAT ACTCAGCNCT ACTCCGTGAT GNTAATTACA
ACGGAATTTC AATGGGTTTA CAACCAGGAA TTGTNAATGN CCCNNCCCCC
AGATATAATA TTTAGTGCTA AAATTCGATT ACATTCACTT GAAGTGTTTT
CAAATTATAT GATTATTTTA CCACAAATAT TAATTCAAAA TGATAATAGA
TGTGCCACAA ATTCAAATGG AAATTGGCGT TGTAATGATA AATTTCCAGT
ACCAGATTGG AGCGGAACTA TTTCACTATT CTTGTACTCA GATGTTACAA
GATATGACCG TGACGTAGTT TATAAACCAA CCTCGACATC CTCAACAGGT
GAAAGGTGAA AGAATCAGTT GGGAACGTGG AGATAATACA CAGAAAGGTG
ATAGTGGAAC AATTATTATT CGTGACTTTG CAGATGTTGG TAGAAATATT
AAAAAAGGTG TAGTTTGGAC GTTGCCTTAT GAAAGACCTC AACAATCTTT
TGATTTTTTA ACAGGATGCT ATGGAATTTA CGTTCAATCT TATCCCTATA
GAAAGTATGT TTCAGATGAT GCTGTTGATA TAACTTTTGT TGCCACTGAA
AATCAACCAA ATTATGATAT AGCCTTCATT CAAAGCTTTT TGTTATCCAA
GCCAAACAAT CAAGTTAAAA TCAGAATTTA TTATTCATAT CACTTAAATA
AAACCTATGA ATATATACCA AATAACTTTC AACTAAAAGT AATAAAAACA
AACTCAAATG GATATGAACT TAATAAAATT AGAAGAATTC TTGCCTCTGG
ATCTGATGAC CTTTATTATT TAAATAAAAC ATACAGTTTT CATACTCAAG
GATCAAGTAA AAACTTGGTT ACTCGTTTAA CATTCCATCA AAATAGAAGT
TATCAATTGT ATGATAGATT TGTATTTGAA ACTCCAAAAT TTGATGTAGG
AAAGGATTTC TCAGTAATTC TATTACCAAT CTCAAGATTT TCAATCCATT
TATTTTCTAT AGAAGTTATA TCTGATAAAT AAAATATTTA ATCATGAGAT
AATATTTTTT TATTTTCTTA AATAAAATAA TTACTCCATA AAAATTTAGT
TTTCTTTATT TCCAAAAAAA AAAAAAAAAA AAACCTTGGC CGGACCCCCT
AACG

Translated Amino Acid Sequence Contig-U14499-1

kilsilxk*kklsfyl*lffyvyyfylqmmli**miphyqiilvwlevefvvfpvygaai
dsclyfvfnlfypkqpeepkvtmkefnermefmairyenlyq*sh*ckcssnmqisi*nf
ekifr*lygyaqymekriwcnwfnyrrn*kqfttsvlcffk*ixrlxxticrsnxx*pxs
qivy*yxsxilsxtp*x*lqrnfngfttrncxxpxpqi*ylvlkfdyihlkcfqii*lfy
hky*fkmiidvpqiqmeigvvminfqyqigaelfhysctqmlqdmtvt*FINQPRHPQQV
KGERISWERGDNTQKGDSGTIIIRDFADVGRNIKKGVVWTLPYERPQQSFDFLTGCYGIY
VQSYPYRKYVSDDAVDITFVATENQPNYDIAFIQSFLLSKPNNQVKIRIYYSYHLNKTYE
YIPNNFQLKVIKTNSNGYELNKIRRILASGSDDLYYLNKTYSFHTQGSSKNLVTRLTFHQ
NRSYQLYDRFVFETPKFDVGKDFSVILLPISRFSIHLFSIEVISDK*ni*s*dniflfs*
ik*llhknlvffiskkkkkknlgrtp*

Homology Contig-U14499-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U14499-1 (Contig-U14499-1Q) /CSM_Contig/Conti...  3077  0.0
Contig-U06491-1 (Contig-U06491-1Q) /CSM_Contig/Conti...    40  0.008
Contig-U11698-1 (Contig-U11698-1Q) /CSM_Contig/Conti...    38  0.031
Contig-U14902-1 (Contig-U14902-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U10996-1 (Contig-U10996-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U10968-1 (Contig-U10968-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U05162-1 (Contig-U05162-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U04178-1 (Contig-U04178-1Q) /CSM_Contig/Conti...    36  0.12
Contig-U13882-1 (Contig-U13882-1Q) /CSM_Contig/Conti...    34  0.48
Contig-U13215-1 (Contig-U13215-1Q) /CSM_Contig/Conti...    34  0.48

Homology Contig-U14499-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU271854) Dictyostelium discoideum gamete cDNA clone:FC-IC0...  1378   0.0    2
(AU271758) Dictyostelium discoideum gamete cDNA clone:FC-IC0...  1287   0.0    4
(BJ400014) Dictyostelium discoideum cDNA clone:dds8p11, 3' e...  1219   0.0    2
(AU271589) Dictyostelium discoideum gamete cDNA clone:FC-IC0...  1189   0.0    2
(BJ429390) Dictyostelium discoideum cDNA clone:ddv3g07, 3' e...  1140   0.0    1
(AU267009) Dictyostelium discoideum vegetative cDNA clone:VS...   884   0.0    2
(AU271618) Dictyostelium discoideum gamete cDNA clone:FC-IC0...   274   0.0    5
(C90842) Dictyostelium discoideum slug cDNA, clone SSJ217.        371   0.0    6
(BJ411180) Dictyostelium discoideum cDNA clone:ddv3g07, 5' e...   375   0.0    4
(AU267008) Dictyostelium discoideum vegetative cDNA clone:VS...   505   0.0    2

Homology Contig-U14499-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC115604_2(AC115604|pid:none) Dictyostelium discoideum chromosom...    94   1e-17
A90041(A90041) nitrite reductase [imported] - Staphylococcus aur...    37   2.2
AP009324_2385(AP009324|pid:none) Staphylococcus aureus subsp. au...    37   2.2
CP001130_421(CP001130|pid:none) Hydrogenobaculum sp. Y04AAS1, co...    36   4.9
(P11872) RecName: Full=cAMP-regulated M3R protein; AltName: Full...    36   4.9
CP000922_2483(CP000922|pid:none) Anoxybacillus flavithermus WK1,...    36   4.9
EU686632_5(EU686632|pid:none) Uncultured marine group III euryar...    36   4.9
BT053602_1(BT053602|pid:none) Medicago truncatula clone MTYFT1G-...    35   6.5