Homology Contig-U14499-1 vs DNA
Query= Contig-U14499-1 (Contig-U14499-1Q) /CSM_Contig/Contig-U14499-1Q.Seq.d
(1704 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU271854) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 1378 0.0 2
(AU271758) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 1287 0.0 4
(BJ400014) Dictyostelium discoideum cDNA clone:dds8p11, 3' e... 1219 0.0 2
(AU271589) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 1189 0.0 2
(BJ429390) Dictyostelium discoideum cDNA clone:ddv3g07, 3' e... 1140 0.0 1
(AU267009) Dictyostelium discoideum vegetative cDNA clone:VS... 884 0.0 2
(AU271618) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 274 0.0 5
(C90842) Dictyostelium discoideum slug cDNA, clone SSJ217. 371 0.0 6
(BJ411180) Dictyostelium discoideum cDNA clone:ddv3g07, 5' e... 375 0.0 4
(AU267008) Dictyostelium discoideum vegetative cDNA clone:VS... 505 0.0 2
(AU271617) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 420 e-157 2
(AU271619) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 496 e-135 1
(AU074005) Dictyostelium discoideum slug cDNA, clone SSJ217. 468 e-127 1
(BJ394790) Dictyostelium discoideum cDNA clone:dds36a16, 5' ... 363 2e-95 1
(AU271620) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 56 4e-19 3
(CU929600) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 52 0.076 1
(CP000728) Clostridium botulinum F str. Langeland, complete ... 38 0.091 20
(DU917869) 336619 Tomato EcoRI BAC Library Solanum lycopersi... 36 0.22 2
(AC098983) Rattus norvegicus clone CH230-47E11, *** SEQUENCI... 50 0.30 1
(DH549549) Rattus norvegicus DNA, BAC clone: RNB1-057G07, 3'... 50 0.30 1
(BU438921) 604143084F1 CSEQRBN11 Gallus gallus cDNA clone Ch... 50 0.30 1
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet... 36 0.35 19
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 36 0.38 22
(FP101979) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.47 5
(BX247870) Zebrafish DNA sequence from clone RP71-24B12 in l... 38 0.52 12
(AP000925) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 40 0.70 10
(CU861666) Zebrafish DNA sequence from clone CH73-196C24 in ... 34 0.80 8
(AL844508) Plasmodium falciparum 3D7 chromosome 9. 34 1.1 18
(AC154855) Mus musculus BAC clone RP23-18N3 from chromosome ... 48 1.2 1
(AC108819) Mus musculus chromosome 14, clone RP23-474O16, co... 48 1.2 1
(AC099204) Rattus norvegicus clone CH230-126O1, WORKING DRAF... 48 1.2 1
(CU457404) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 1.2 1
(AV399406) Bombyx mori cDNA clone:NV120189. 48 1.2 1
(DC544743) Bombyx mori cDNA, clone:E_FL_dpe-_27G12_F_0, 5' e... 48 1.2 1
(AC235305) Glycine max strain Williams 82 clone GM_WBb0067G0... 36 1.3 7
(AE014188) Plasmodium falciparum 3D7 chromosome 12, complete... 34 1.8 21
(BX510907) Zebrafish DNA sequence from clone CH211-234B6 in ... 40 2.1 7
(AC073698) Mus musculus clone RP23-161L11, WORKING DRAFT SEQ... 38 2.6 6
(AM441405) Vitis vinifera, whole genome shotgun sequence, co... 36 2.9 4
(AC181269) Strongylocentrotus purpuratus clone R3-4014H23, W... 38 3.0 3
(CX250742) 1303008 NCCCWA 02RT Oncorhynchus mykiss cDNA clon... 32 3.2 2
(ET721285) CHO_OF851xh17r1.ab1 CHO_OF Nicotiana tabacum geno... 36 3.3 2
(U33118) Plasmodium falciparum adenylate cyclase (PFAC) gene... 36 3.5 3
(CP001161) Buchnera aphidicola str. 5A (Acyrthosiphon pisum)... 34 4.1 18
(FH177625) CHO_OF3405xj02r1.ab1 CHO_OF3 Nicotiana tabacum ge... 36 4.2 2
(CT030252) Zebrafish DNA sequence from clone CH73-32B10 in l... 40 4.5 6
(EF445030) Homo sapiens serine/threonine-protein kinase SNF1... 40 4.5 8
(CT954335) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 4.7 1
(AC235908) Glycine max strain Williams 82 clone GM_WBc0208D2... 46 4.7 1
(AC201032) Strongylocentrotus purpuratus clone R3-12J12, WOR... 46 4.7 1
(AC200939) Strongylocentrotus purpuratus clone R3-1032G03, W... 46 4.7 1
(AC194443) Zea mays chromosome 1 clone CH201-151I1; ZMMBBc01... 46 4.7 1
(AC186223) Zea mays chromosome 1 clone CH201-318J10; ZMMBBc0... 46 4.7 1
(AC178534) Strongylocentrotus purpuratus clone R3-3031A5, WO... 46 4.7 1
(AC178240) Strongylocentrotus purpuratus clone R3-1116F8, WO... 46 4.7 1
(AC172321) Strongylocentrotus purpuratus clone R3-14G15, WOR... 46 4.7 1
(EK175249) 1095458095270 Global-Ocean-Sampling_GS-31-01-01-1... 46 4.7 1
(CP000107) Ehrlichia canis str. Jake, complete genome. 46 4.7 1
(CU694918) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 34 4.9 7
(FH614901) CHO_OF4087xh20f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 5.1 2
(EA102686) Sequence 69 from patent US 7195870. 42 5.2 3
(AX323585) Sequence 73 from Patent WO0192565. 42 5.2 3
(AX277906) Sequence 69 from Patent WO0177375. 42 5.2 3
(GM995933) Sequence 73 from Patent EP2014776. 42 5.2 3
(AC155884) Medicago truncatula chromosome 2 clone mth2-10d10... 38 5.8 6
(EJ272042) 1095353020350 Global-Ocean-Sampling_GS-27-01-01-1... 40 6.1 2
(GR583612) CCAA1778.b1 CCAA Dictyostelium purpureum 0 hr sta... 42 6.2 2
(GR578059) CBZY1015.b1 CBZY Dictyostelium purpureum 18 hr st... 42 6.2 2
(FH396894) CHO_OF4808xk03f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 6.3 2
(FH554549) CHO_OF4500xj19f1.ab1 CHO_OF4 Nicotiana tabacum ge... 36 6.4 2
(EC345385) KIDNEYF091703L3 POSSUM_01-POSSUM-KIDNEY-2KB Trich... 38 6.4 2
(AL844505) Plasmodium falciparum 3D7 chromosome 6. 34 6.5 18
(EI988449) SB_BBc167-G18.R SB_BBc Sorghum bicolor genomic 3'... 42 6.6 2
(EJ286732) 1095368024892 Global-Ocean-Sampling_GS-27-01-01-1... 44 6.9 2
(EJ582498) 1092960185470 Global-Ocean-Sampling_GS-29-01-01-1... 44 6.9 2
(CP001581) Clostridium botulinum A2 str. Kyoto, complete gen... 38 7.1 21
(CP000575) Staphylothermus marinus F1, complete genome. 32 7.3 2
(CP001083) Clostridium botulinum Ba4 str. 657, complete genome. 38 7.7 20
(AC114119) Rattus norvegicus clone CH230-14N15, *** SEQUENCI... 34 8.4 2
(AC096294) Rattus norvegicus clone CH230-37H23, *** SEQUENCI... 34 8.4 2
(CR847546) Zebrafish DNA sequence from clone CH211-261D5 in ... 38 8.5 8
(AL935169) Zebrafish DNA sequence from clone CH211-227E15. 44 8.6 5
(BD061520) Genome DNA of symbiotic bacteria of aphid. 34 9.9 18
(AR409405) Sequence 1 from patent US 6632935. 34 9.9 18
(BA000003) Buchnera aphidicola str. APS (Acyrthosiphon pisum... 34 9.9 18
(BB394641) Mus musculus 0 day neonate cerebellum cDNA, RIKEN... 38 10.0 2
>(AU271854) Dictyostelium discoideum gamete cDNA clone:FC-IC0815, 3'
end single read.
Length = 860
Score = 1378 bits (695), Expect(2) = 0.0
Identities = 699/701 (99%)
Strand = Plus / Minus
Query: 904 aggtgaaagaatcagttgggaacgtggagataatacacagaaaggtgatagtggaacaat 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 aggtgaaagaatcagttgggaacgtggagataatacacagaaaggtgatagtggaacaat 740
Query: 964 tattattcgtgactttgcagatgttggtagaaatattaaaaaaggtgtagtttggacgtt 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tattattcgtgactttgcagatgttggtagaaatattaaaaaaggtgtagtttggacgtt 680
Query: 1024 gccttatgaaagacctcaacaatcttttgattttttaacaggatgctatggaatttacgt 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gccttatgaaagacctcaacaatcttttgattttttaacaggatgctatggaatttacgt 620
Query: 1084 tcaatcttatccctatagaaagtatgtttcagatgatgctgttgatataacttttgttgc 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcaatcttatccctatagaaagtatgtttcagatgatgctgttgatataacttttgttgc 560
Query: 1144 cactgaaaatcaaccaaattatgatatagccttcattcaaagctttttgttatccaagcc 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cactgaaaatcaaccaaattatgatatagccttcattcaaagctttttgttatccaagcc 500
Query: 1204 aaacaatcaagttaaaatcagaatttattattcatatcacttaaataaaacctatgaata 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aaacaatcaagttaaaatcagaatttattattcatatcacttaaataaaacctatgaata 440
Query: 1264 tataccaaataactttcaactaaaagtaataaaaacaaactcaaatggatatgaacttaa 1323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tataccaaataactttcaactaaaagtaataaaaacaaactcaaatggatatgaacttaa 380
Query: 1324 taaaattagaagaattcttgcctctggatctgatgacctttattatttaaataaaacata 1383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 taaaattagaagaattcttgcctctggatctgatgacctttattatttaaataaaacata 320
Query: 1384 cagttttcatactcaaggatcaagtaaaaacttggttactcgtttaacattccatcaaaa 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cagttttcatactcaaggatcaagtaaaaacttggttactcgtttaacattccatcaaaa 260
Query: 1444 tagaagttatcaattgtatgatagatttgtatttgaaactccaaaatttgatgtaggaaa 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tagaagttatcaattgtatgatagatttgtatttgaaactccaaaatttgatgtaggaaa 200
Query: 1504 ggatttctcagtaattctattaccaatctcaagattttcaatccatttattttctataga 1563
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ngatttctcagtaattctattaccaatctcaagattttcaatccatttattttctataga 140
Query: 1564 agttatatctgataaataaaatatttaatcatgagataata 1604
||||||||||||| |||||||||||||||||||||||||||
Sbjct: 139 agttatatctgatnaataaaatatttaatcatgagataata 99
Score = 139 bits (70), Expect(2) = 0.0
Identities = 70/70 (100%)
Strand = Plus / Minus
Query: 836 actcagatgttacaagatatgaccgtgacgtagtttataaaccaacctcgacatcctcaa 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 actcagatgttacaagatatgaccgtgacgtagtttataaaccaacctcgacatcctcaa 801
Query: 896 caggtgaaag 905
||||||||||
Sbjct: 800 caggtgaaag 791
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 2,235,927,074
Number of extensions: 136408743
Number of successful extensions: 11503384
Number of sequences better than 10.0: 87
Length of query: 1704
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1680
Effective length of database: 104,103,628,548
Effective search space: 174894095960640
Effective search space used: 174894095960640
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home