<Clone: Contig-U14495-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Contig-U14495-1
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Assembled
Chromosomal Location of Contig-U14495-1
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more Chromosomal info
>
| Chromosome Number |
3 |
| Length |
6358359 |
| Start Poin |
863,294 |
| End Point |
862,811 |
| Strand |
MINUS |
Sequence Contig-U14495-1
GTATCATCCC ACCTCTTGCG AGTCTTTATA AACTTACACA ATGTCAATGA
ACCCAATCAA AAAAACCGAA GAAACCGTTG CAGCCCCAGC TGTCAACAAA
ATCAGTATCA CCTTAACCTC AAGAAACCCA AAATCTCTTG AAAAAGTTTG
CGCTGATATC ATCACTCTTG CTAAAAACAA GAAAGTCAAG GCTAAGGGTC
CAATCCGTAT CCCAAACAAA GTCTTAAAAA TCACCACCCG TAAAAGTCCA
TGTGGTGAAG GTACAAACAC CTGGGATCGT TTCGAAATGA GAATCCACAA
ACGTGTCATC CACATCTTAT CCACCCAAGA TTTCGTCAAG GAAATGAACA
CCATCTCAAT CGAAGCTTGG CGTTGATGTT GAAGTCATCA TGGATAAAAA
AAGAAGCCAA AAACTAAATT AATTAATCTT TAATTTATTA ATAAACTTTT
TTTATTATTT ATAAAAAAAA AAAAAAAAAA AAA
Translated Amino Acid Sequence Contig-U14495-1
<All Frames>
yhptscesl*TYTMSMNPIKKTEETVAAPAVNKISITLTSRNPKSLEKVCADIITLAKNK
KVKAKGPIRIPNKVLKITTRKSPCGEGTNTWDRFEMRIHKRVIHILSTQDFVKEMNTISI
EAWR*c*shhg*kkkpktklinl*finklfllfikkkkkk
Homology Contig-U14495-1 vs CSM-Contig
<more CONTIG info>
Sequences producing significant alignments: (bits) Value
Contig-U14495-1 (Contig-U14495-1Q) /CSM_Contig/Conti... 801 0.0
Contig-U12392-1 (Contig-U12392-1Q) /CSM_Contig/Conti... 38 0.008
Contig-U07119-1 (Contig-U07119-1Q) /CSM_Contig/Conti... 36 0.033
Contig-U04637-1 (Contig-U04637-1Q) /CSM_Contig/Conti... 36 0.033
Contig-U07909-1 (Contig-U07909-1Q) /CSM_Contig/Conti... 34 0.13
Contig-U14597-1 (Contig-U14597-1Q) /CSM_Contig/Conti... 32 0.52
Contig-U13684-1 (Contig-U13684-1Q) /CSM_Contig/Conti... 32 0.52
Contig-U13415-1 (Contig-U13415-1Q) /CSM_Contig/Conti... 32 0.52
Contig-U13190-1 (Contig-U13190-1Q) /CSM_Contig/Conti... 32 0.52
Contig-U12200-1 (Contig-U12200-1Q) /CSM_Contig/Conti... 32 0.52
Homology Contig-U14495-1 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(BJ391663) Dictyostelium discoideum cDNA clone:dds24b22, 5' ... 599 0.0 3
(BJ416508) Dictyostelium discoideum cDNA clone:ddv26k18, 5' ... 591 0.0 3
(AU270583) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(BJ403320) Dictyostelium discoideum cDNA clone:dds24b22, 3' ... 599 0.0 3
(AU262659) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU270584) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(BJ435282) Dictyostelium discoideum cDNA clone:ddv26k18, 3' ... 591 0.0 3
(AU262998) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU262257) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
(AU266354) Dictyostelium discoideum vegetative cDNA clone:VS... 599 0.0 3
Homology Contig-U14495-1 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q54Y41) RecName: Full=40S ribosomal protein S20; 217 5e-57
(Q9STY6) RecName: Full=40S ribosomal protein S20-2; &AK227448_1... 137 2e-31
CP000583_102(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 135 5e-31
AM427997_1(AM427997|pid:none) Vitis vinifera contig VV78X043700.... 133 2e-30
AK062522_1(AK062522|pid:none) Oryza sativa Japonica Group cDNA c... 132 5e-30
CP001325_265(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 131 9e-30
EU952622_1(EU952622|pid:none) Zea mays clone 1284507 40S ribosom... 131 9e-30
EU302580_1(EU302580|pid:none) Lineus viridis ribosomal protein r... 130 1e-29
AB170385_1(AB170385|pid:none) Macaca fascicularis brain cDNA clo... 130 2e-29
AB019235_13(AB019235|pid:none) Arabidopsis thaliana genomic DNA,... 130 2e-29
<Clone: Contig-U14495-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
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