Dictyostelium discoideum cDNA Contig-U14399-1

Assembled

Chromosomal Location of Contig-U14399-1

Sequence Contig-U14399-1

TACAACCACC ACATCAACAA CATCAACTAC AACAACCAAT TAAAACTCCA
AGTCCGATCA ACGCTATAAA TATTGTTAAA TTAAATCAAT CTGATTTAAT
AACTCCACCA AAAACCTCAC CAAAGAAAGA AGGTAGTATA CCATCCTCTT
CATCTCATGG TAATATTCCA TCATTGGTTA CAACCTCACC AAAATCACCA
TTACAACATC AACAACAAAT ACCACAACAA CAACAAGATC CAGCTATGAT
AAATAGTAAT AATAGTAGTA TTAGTAGTAA TGGCGCATAC AATAGAGAAT
TAATATCTGC ATCGGGTAGT GCTCTATCAA AACCCCCATC TCCATCTTCC
GATAAAGAAA ATAACTCTAC CAGTAAATCA AATAAATCAA AATCTAGACA
ATCATCAAGA GCCTCCTCTT TATCAGAGAG TTCAGATTCA ACCTCTCATA
CTTCGAGCTC TGATGAACAC TCTAGTAGAT ATGAAAGTGA TAGAAAATCT
TATAAAAAGA AAAAGAGCAG TAGCAGTAGT AGCAATAGTA AAAGAGATCG
TGAACGTGAA CGTGACCGTG ATCGTTCTAA TAAAACCTAT AAAAACTCTA
GAAGTAGAAA TGTTAGTAGA GACAGAGAAA GAGAAAGAGA TAGACATAAT
CGTTCAAGAG ACAGAGATAG AGAAAGAGAA AGGGAAAGAG ATAGAGACAG
AGAAAGAGAT AGAGACAGAA GTAGAGATCG TTCAAGAGAT AGAAGTAGAG
ATAGAGAAAG AGATAGAAGT AGAGATCGTT CAAGAGATAG AGATAGAAGT
AGAGATCGTT CAAGAGATAG AAGTAGAGAA AGGGATAGAG ATAGAAGTAG
AGATAGAAGC AGAGATCGTT CAAGAAGTAG AGATTCTGAT AGTAGGGATA
GAAGTAGAGA TCGTTCAAGA AGTCATTCCA ACAGAAGAAG AAGTAGAAGT
CGTGATAGTA GAAATAAATC CAGAGATAGA TCATCTGATT CTGATAGAAG
TAGAGACAGA AGTAGAGATA GAGATTATAA ATCTTCAAAA TATAAAAAGA
GTAGTAGAGG TACCAGTGGT AGAAAGAATA ATAAAATTCA ATCAAAACTC
GACTCCCAAG CAACTCATAT TTCCTATCTT GAAGATAAGA TATCCACACT
CACCAATTGG CTTCAACAAC AAAACCTTCT CAATACTAGT AATGGTCAAG
TTTTATCTCC AACCGATCCA AATTTGGTTT CTAAACTTCA AACTCAATTG
GATGTTCTTC AATCAGAAAA TTCTTATCTA AGAAATGAA

Translated Amino Acid Sequence Contig-U14399-1

QPPHQQHQLQQPIKTPSPINAINIVKLNQSDLITPPKTSPKKEGSIPSSSSHGNIPSLVT
TSPKSPLQHQQQIPQQQQDPAMINSNNSSISSNGAYNRELISASGSALSKPPSPSSDKEN
NSTSKSNKSKSRQSSRASSLSESSDSTSHTSSSDEHSSRYESDRKSYKKKKSSSSSSNSK
RDRERERDRDRSNKTYKNSRSRNVSRDRERERDRHNRSRDRDRERERERDRDRERDRDRS
RDRSRDRSRDRERDRSRDRSRDRDRSRDRSRDRSRERDRDRSRDRSRDRSRSRDSDSRDR
SRDRSRSHSNRRRSRSRDSRNKSRDRSSDSDRSRDRSRDRDYKSSKYKKSSRGTSGRKNN
KIQSKLDSQATHISYLEDKISTLTNWLQQQNLLNTSNGQVLSPTDPNLVSKLQTQLDVLQ
SENSYLRNE

Homology Contig-U14399-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U14399-1 (Contig-U14399-1Q) /CSM_Contig/Conti...   844  0.0
Contig-U08720-1 (Contig-U08720-1Q) /CSM_Contig/Conti...    52  2e-06
Contig-U13348-1 (Contig-U13348-1Q) /CSM_Contig/Conti...    48  2e-05
Contig-U12625-1 (Contig-U12625-1Q) /CSM_Contig/Conti...    48  2e-05
Contig-U11515-1 (Contig-U11515-1Q) /CSM_Contig/Conti...    46  9e-05
Contig-U02042-1 (Contig-U02042-1Q) /CSM_Contig/Conti...    46  9e-05
Contig-U13991-1 (Contig-U13991-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U12381-1 (Contig-U12381-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U11734-1 (Contig-U11734-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U09872-1 (Contig-U09872-1Q) /CSM_Contig/Conti...    44  4e-04

Homology Contig-U14399-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ383098) Dictyostelium discoideum cDNA clone:ddc46i22, 3' ...   755   0.0    3
(GR579244) CBZY1919.b1 CBZY Dictyostelium purpureum 18 hr st...    72   6e-48  8
(GR578544) CBZY1361.g1 CBZY Dictyostelium purpureum 18 hr st...    72   6e-34  6
(GR570060) CBTF897.g1 CBTF Dictyostelium purpureum 12 hr veg...    52   2e-12  4
(AU072824) Dictyostelium discoideum slug cDNA, clone SSF185.       68   5e-07  3
(C23797) Dictyostelium discoideum gamete cDNA, clone FC-AK03.      48   2e-04  3
(FM927169) Brachionus plicatilis EST 5' end, clone sb103P002...    60   2e-04  1
(C90666) Dictyostelium discoideum slug cDNA, clone SSI893.         48   4e-04  3
(AC098764) Rattus norvegicus clone CH230-117C9, *** SEQUENCI...    42   0.003  2
(BJ342021) Dictyostelium discoideum cDNA clone:dda9m06, 3' e...    52   0.004  2

Homology Contig-U14399-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q551H4) RecName: Full=Serine/threonine-protein kinase fray2;   ...   152   3e-35