<Clone: Contig-U14387-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U14387-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U14387-1

< more Chromosomal info >

Chromosome Number 2
Length 8467578
Start Poin 7,158,158
End Point 7,159,183
Strand PLUS

Sequence Contig-U14387-1

GTAAAATAAA ATAATTTTAT TATGGTTGTT ATTAATAGTG ATCCTATGTA
CAATTTCAAA TGTAAAAGGA TGTGGTATGA CAACACATAA TACAGTGGCA
AGAAGAGCAT ATAACTTCTC AAGTTTTGAT GGTTTTGAAC AATATCAAAA
ATATGTTTCA GAGAATTTTG ATGTATTTGA TGCAGGTGCA GCATTCCCAG
ATTTTGGATA TGATTGTGGT GGATTAGCAA ATGAATCAGA AGCAGCACAT
TGGCCACTAT TTTTAAGAGC AGCAACTAAA TACTTATTAG AAACTTATCC
CCAACCATGG AGTTTGGATG GTATTAGATT AGCAGTATTT CTTTTAGGTG
TAACTTCACA TCAAATTGCT GATATTTCAT GGCATTCAAT TGGTGGTATT
CAACAAGGTT TAATTCGTGC TATGGCAGGT CAAGATTTTA ATGGTACTTA
TGAATTAGCT CATGGCAATG CTGATGAAGG TGGTGAATTT GAATTAGCTT
ATAATTATGA TTTATCTTGG TTATCTGATA AATGGTATGT GCCAATTACA
GATATAAAGA ATATTTTTCA TTCAATGAAT TATCCAAGAG TTGATGATGA
AAATTTATTA AGATGTAATG CAATATTGTA TGCTGGTGCA ATGGGTGTTA
AGATTGGTGG TAGATTTTTC TATCCTGAAA TTGCAAAGAA ATCACCATTC
TTGGTTGACC ATTATCAAAA TTATTTCATT GGTGGTTTGG ATGATATGTC
AATTTGGACA TCATATTGTT GGCCAGTATT AATGGGTTGG ATGGATGGCG
AAGATATTGG TGATTTTTGT TTTATTCAAC CTGATCCAAA TAATGATGAT
GACAATCAAC ATTTACGTTT ACATCATAAA CATTCAATAT TAAAAAATGG
TTCAAAAATT AAAGAAGCAT TATCAAAATC AATTTTAAAT GAAATGAAAA
TTACAAATAA TGGTAAANGT GTAACTTTTT CATTACCAAA TTCAATGGAA
AAAGCAATTA ATCAAGTTTT AAAT

Translated Amino Acid Sequence Contig-U14387-1

<All Frames> 
*NKIILLWLLLIVILCTISNVKGCGMTTHNTVARRAYNFSSFDGFEQYQKYVSENFDVFD
AGAAFPDFGYDCGGLANESEAAHWPLFLRAATKYLLETYPQPWSLDGIRLAVFLLGVTSH
QIADISWHSIGGIQQGLIRAMAGQDFNGTYELAHGNADEGGEFELAYNYDLSWLSDKWYV
PITDIKNIFHSMNYPRVDDENLLRCNAILYAGAMGVKIGGRFFYPEIAKKSPFLVDHYQN
YFIGGLDDMSIWTSYCWPVLMGWMDGEDIGDFCFIQPDPNNDDDNQHLRLHHKHSILKNG
SKIKEALSKSILNEMKITNNGKXVTFSLPNSMEKAINQVLN


Homology Contig-U14387-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U14387-1 (Contig-U14387-1Q) /CSM_Contig/Conti...  2024  0.0
Contig-U12138-1 (Contig-U12138-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U11313-1 (Contig-U11313-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U05702-1 (Contig-U05702-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U14161-1 (Contig-U14161-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U12069-1 (Contig-U12069-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U05409-1 (Contig-U05409-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U04236-1 (Contig-U04236-1Q) /CSM_Contig/Conti...    38  0.018
Contig-U13156-1 (Contig-U13156-1Q) /CSM_Contig/Conti...    36  0.072
Contig-U13053-1 (Contig-U13053-1Q) /CSM_Contig/Conti...    36  0.072


Homology Contig-U14387-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ368016) Dictyostelium discoideum cDNA clone:ddc44o02, 5' ...  1007   0.0    2
(AU073765) Dictyostelium discoideum slug cDNA, clone SSI311.      476   e-130  1
(GR566615) CBTF2449.b1 CBTF Dictyostelium purpureum 12 hr ve...   147   5e-88  4
(GR565064) CBTF1280.b1 CBTF Dictyostelium purpureum 12 hr ve...   147   4e-82  4
(GR565756) CBTF1791.b1 CBTF Dictyostelium purpureum 12 hr ve...   139   1e-61  3
(GR566634) CBTF2466.b1 CBTF Dictyostelium purpureum 12 hr ve...   139   4e-58  3
(GR566808) CBTF2605.b1 CBTF Dictyostelium purpureum 12 hr ve...    74   2e-14  2
(AM464544) Vitis vinifera contig VV78X222600.5, whole genome...    40   0.060  2
(EY345130) CAWZ13685.fwd CAWZ Helobdella robusta Primary Lat...    34   0.14   2
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69...    36   0.24   8


Homology Contig-U14387-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AC115584_1(AC115584|pid:none) Dictyostelium discoideum chromosom...   657   0.0
L11701_1(L11701|pid:none) Human phospholipase D mRNA, complete c...   186   9e-46
(Q96ID6) RecName: Full=Phosphatidylinositol-glycan-specific phos...   184   6e-45
AY007546_1(AY007546|pid:none) Homo sapiens glycosylphosphatidyli...   184   6e-45
AJ308108_1(AJ308108|pid:none) Homo sapiens mRNA for glycosylphos...   184   6e-45
(Q8R2H5) RecName: Full=Phosphatidylinositol-glycan-specific phos...   180   6e-44
AY333960_1(AY333960|pid:none) Mus musculus glycosylphosphatidyli...   177   5e-43
(P80109) RecName: Full=Phosphatidylinositol-glycan-specific phos...   171   4e-41
CR382128_630(CR382128|pid:none) Yarrowia lipolytica strain CLIB1...   120   8e-26
BC020748_1(BC020748|pid:none) Homo sapiens glycosylphosphatidyli...   116   1e-24


<Clone: Contig-U14387-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Project Home