Homology Contig-U14241-1 vs DNA
Query= Contig-U14241-1 (Contig-U14241-1Q) /CSM_Contig/Contig-U14241-1Q.Seq.d
(636 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU262456) Dictyostelium discoideum vegetative cDNA clone:VS... 345 e-133 4
(BJ342842) Dictyostelium discoideum cDNA clone:dda15i01, 3' ... 315 1e-81 2
(BJ326451) Dictyostelium discoideum cDNA clone:dda16d16, 5' ... 315 1e-81 2
(BJ387534) Dictyostelium discoideum cDNA clone:dds3o02, 5' e... 315 1e-81 2
(BJ340428) Dictyostelium discoideum cDNA clone:dda2g02, 3' e... 315 1e-81 2
(BJ431445) Dictyostelium discoideum cDNA clone:ddv14o03, 3' ... 315 1e-81 1
(BJ344041) Dictyostelium discoideum cDNA clone:dda18a12, 3' ... 315 1e-81 1
(BJ343171) Dictyostelium discoideum cDNA clone:dda22b09, 3' ... 315 1e-81 1
(BJ342311) Dictyostelium discoideum cDNA clone:dda13m07, 3' ... 315 1e-81 1
(BJ413247) Dictyostelium discoideum cDNA clone:ddv14f20, 5' ... 220 3e-53 2
(BJ362683) Dictyostelium discoideum cDNA clone:ddc23d04, 5' ... 78 2e-25 2
(BJ410438) Dictyostelium discoideum cDNA clone:ddv12e15, 5' ... 119 1e-22 1
(BJ439716) Dictyostelium discoideum cDNA clone:ddv41i11, 3' ... 103 2e-18 2
(EK050058) 1092959687736 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.11 1
(EK019632) 1092955266272 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.11 1
(AL954675) Mouse DNA sequence from clone RP24-468P16 on chro... 48 0.43 1
(AC190372) Felis catus clone RP86-278K23, WORKING DRAFT SEQU... 46 1.7 1
(AC186123) Felis catus clone RP86-201E23, WORKING DRAFT SEQU... 46 1.7 1
(AC127247) Mus musculus BAC clone RP24-435G16 from 3, comple... 44 6.7 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 44 6.7 1
(AC023680) Drosophila melanogaster 3L BAC RPCI98-9C2 (Roswel... 44 6.7 1
(AL445256) Human DNA sequence from clone RP11-167K24 on chro... 44 6.7 1
(AC092783) Homo sapiens chromosome 1 clone RP5-827O9, comple... 44 6.7 1
(AC090249) Homo sapiens chromosome 18 clone RP11-879H3 map 1... 44 6.7 1
(AL356487) Human DNA sequence *** SEQUENCING CANCELLED *** f... 44 6.7 1
(AC237514) Sterkiella histriomuscorum chromosome unknown clo... 44 6.7 1
(AC015395) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 6.7 1
(CE825454) tigr-gss-dog-17000318989319 Dog Library Canis lup... 44 6.7 1
>(AU262456) Dictyostelium discoideum vegetative cDNA clone:VSC288,
3' end single read.
Length = 637
Score = 345 bits (174), Expect(4) = e-133
Identities = 174/174 (100%)
Strand = Plus / Minus
Query: 463 aactgcttccaaaacatgaattggttgataacctggcatattctctggtttaaatggtaa 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 aactgcttccaaaacatgaattggttgataacctggcatattctctggtttaaatggtaa 115
Query: 523 tggatgatttgtaaaaaatggtgattgtaatgcttgttcagctgttaatctttcctttgg 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tggatgatttgtaaaaaatggtgattgtaatgcttgttcagctgttaatctttcctttgg 55
Query: 583 atttaatgttaataaaccttctaataattctataaaatcattttgaaaagtttt 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 atttaatgttaataaaccttctaataattctataaaatcattttgaaaagtttt 1
Score = 83.8 bits (42), Expect(4) = e-133
Identities = 42/42 (100%)
Strand = Plus / Minus
Query: 246 aatttcaaaacgagttactttattatctgatggtttaccata 287
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aatttcaaaacgagttactttattatctgatggtttaccata 350
Score = 77.8 bits (39), Expect(4) = e-133
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 164 gaactacaacaactcttggatcggatggtcttgaagcaa 202
|||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gaactacaacaactcttggatcggatggtcttgaagcaa 435
Score = 54.0 bits (27), Expect(4) = e-133
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 100 attatacctggaggagtgatatgtatg 126
|||||||||||||||||||||||||||
Sbjct: 537 attatacctggaggagtgatatgtatg 511
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 359,086,693
Number of extensions: 21063351
Number of successful extensions: 1608165
Number of sequences better than 10.0: 29
Length of query: 636
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 612
Effective length of database: 104,103,628,548
Effective search space: 63711420671376
Effective search space used: 63711420671376
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home