<Clone: Contig-U14239-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U14239-1

Dictyostelium discoideum cDNA Project Home

Assembled

Chromosomal Location of Contig-U14239-1

< more Chromosomal info >

Chromosome Number 6
Length 3595308
Start Poin 1,476,864
End Point 1,475,630
Strand MINUS

Sequence Contig-U14239-1

CAAAATATAA TTAAAATTAT TCAAAAATCC AATAAACGTT ATTTTTCATC
ATCAAATGAA TTAAAAAAAA CAGCATTAAA TGAATTACAT AAAGAATTAG
GAGCAAAAAT GGTACCATTT TGTGGATGGG AAATGCCGGT TCAATATCCA
GCAGGTGTTA TGAAAGAACA TTTACATGTT AGAAAAGAGA GTGGATTATT
TGATGTTTCT CATATGGGAC AATTAAGAAT TCATGGTAAA GATCGTGTTA
AATTCTTTGA GTCAATTGTA GTAGCAGATT TACAAGCATT ACCAACTGGA
CATTCAAAAT TATCAGTATT CACCAATGAG AAAGGTGGTA TCATCGATGA
CACAATGATT ACCAATGCTG GTGATTCATT GTATGTAGTT GTCAATGCAG
GTTGTGCAGA TAAAGATATT TCACATATTA ATGAAAAGAT TAAAGAATTC
AAATCTGTCA ATCCAACACA CGATGTAAGT ATGCAATTAT TGGAAGATCT
CTCATTGATC GCTATCCAAG GTCCAACCAC TGAATCAATA TTACAAAAAT
TCGTAAAAGA TCAAGATATT ACCAATATGG AATTTATGAC ACAACGTCCA
ATGACAATCG CAGGTATCGA TTGCATAGTG ACACGTTGTG GTTACACAGG
TGAAGATGGT TTTGAAATTT CCGTACCATC AAAACAAGCC GTACGATTGG
CTGAATTGTT TTTAGCAACT AGTAATGCCT CAATTGAAAG TGGTATTAAA
CCAGCTGGTT TAGGTGCTAG AGATTCACTT CGTTTAGAAG CTGGTCTCTG
TTTGTATGGT CATGATTTAA ATGATGATAT CACTCCAATC GAAGCATCAC
TCAATTGGTT AATTAGTAAA CGTCGTAGAG AAGAAGGTGG TTTCCCAGGT
GCTTCAATCA TTCAAAAACA ATTACAAAAG GATGGTTGTC CACAAAAACG
TGTTGGTGTC ATCATCAATG GTGCTCCTGC TCGTGAAGGT TGTTTAATCC
TCGACCCTTC AACAAACCCA AGAAATCGGT AAAGTCACAA GTGGCACTAT
CTCCCCAATC ACCCGTCAAT CAATCTCAAT GGCATACGTT AAAACTCCTT
TCTCTAAAAT CGGTACTCAA GTCAATGTTT CAATTCGTGG TAAACCAATT
ACTGCCACAA TTTCAAAAAT GCCGTTTGTC CCAACAAATT ATAAAAAATT
ATAAAAAATT ATAAAAAATT ATAAAAAAAA AAAA

Translated Amino Acid Sequence Contig-U14239-1

<All Frames> 
QNIIKIIQKSNKRYFSSSNELKKTALNELHKELGAKMVPFCGWEMPVQYPAGVMKEHLHV
RKESGLFDVSHMGQLRIHGKDRVKFFESIVVADLQALPTGHSKLSVFTNEKGGIIDDTMI
TNAGDSLYVVVNAGCADKDISHINEKIKEFKSVNPTHDVSMQLLEDLSLIAIQGPTTESI
LQKFVKDQDITNMEFMTQRPMTIAGIDCIVTRCGYTGEDGFEISVPSKQAVRLAELFLAT
SNASIESGIKPAGLGARDSLRLEAGLCLYGHDLNDDITPIEASLNWLISKRRREEGGFPG
ASIIQKQLQKDGCPQKRVGVIINGAPAREGCLILDPSTNPRNR*shkwhylpnhpsinln
gir*nsfl*nryssqcfnsw*tnychnfknavcpnkl*kiiknykkl*kkk


Homology Contig-U14239-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U14239-1 (Contig-U14239-1Q) /CSM_Contig/Conti...  2302  0.0
Contig-U06050-1 (Contig-U06050-1Q) /CSM_Contig/Conti...  2194  0.0
Contig-U13994-1 (Contig-U13994-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U11701-1 (Contig-U11701-1Q) /CSM_Contig/Conti...    36  0.087
Contig-U09949-1 (Contig-U09949-1Q) /CSM_Contig/Conti...    36  0.087
Contig-U05175-1 (Contig-U05175-1Q) /CSM_Contig/Conti...    36  0.087
Contig-U04954-1 (Contig-U04954-1Q) /CSM_Contig/Conti...    36  0.087
Contig-U14308-1 (Contig-U14308-1Q) /CSM_Contig/Conti...    34  0.35
Contig-U12744-1 (Contig-U12744-1Q) /CSM_Contig/Conti...    34  0.35
Contig-U12482-1 (Contig-U12482-1Q) /CSM_Contig/Conti...    34  0.35


Homology Contig-U14239-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(BJ411975) Dictyostelium discoideum cDNA clone:ddv6c18, 5' e...  1116   0.0    2
(BJ430227) Dictyostelium discoideum cDNA clone:ddv6c18, 3' e...  1110   0.0    2
(AU264882) Dictyostelium discoideum vegetative cDNA clone:VS...  1106   0.0    2
(BJ362787) Dictyostelium discoideum cDNA clone:ddc23b15, 5' ...  1065   0.0    2
(BJ377069) Dictyostelium discoideum cDNA clone:ddc22b15, 3' ...   985   0.0    2
(AU264883) Dictyostelium discoideum vegetative cDNA clone:VS...   700   0.0    2
(ER301312) 1092343693232 Global-Ocean-Sampling_GS-34-01-01-1...    64   4e-17  2
(EJ257123) 1095349015903 Global-Ocean-Sampling_GS-27-01-01-1...    56   7e-14  3
(EK584943) 1095522052794 Global-Ocean-Sampling_GS-32-01-01-1...    60   1e-11  2
(EJ233754) 1092404073944 Global-Ocean-Sampling_GS-27-01-01-1...    56   5e-11  3


Homology Contig-U14239-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


CR450777_5(CR450777|pid:none) Zebrafish DNA sequence from clone ...   309   5e-96
BC083400_1(BC083400|pid:none) Danio rerio aminomethyltransferase...   308   1e-95
CP000021_704(CP000021|pid:none) Vibrio fischeri ES114 chromosome...   309   2e-94
(P49364) RecName: Full=Aminomethyltransferase, mitochondrial;   ...   309   2e-93
(O23936) RecName: Full=Aminomethyltransferase, mitochondrial;   ...   306   2e-93
BT078398_1(BT078398|pid:none) Lepeophtheirus salmonis Pacific fo...   311   3e-93
(O65396) RecName: Full=Aminomethyltransferase, mitochondrial;   ...   307   5e-93
(P93256) RecName: Full=Aminomethyltransferase, mitochondrial;   ...   301   5e-93
BA000038_696(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, chr...   308   1e-92
(P54260) RecName: Full=Aminomethyltransferase, mitochondrial;   ...   301   2e-92


<Clone: Contig-U14239-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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