Homology Contig-U14139-1 vs Protein
Query= Contig-U14139-1 (Contig-U14139-1Q) /CSM_Contig/Contig-U14139-1Q.Seq.d
(1207 letters)
Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(P13022) RecName: Full=F-actin-capping protein subunit alpha; Al... 564 e-159
(Q2QLB9) RecName: Full=F-actin-capping protein subunit alpha-2; ... 221 5e-56
(Q2IBB9) RecName: Full=F-actin-capping protein subunit alpha-2; ... 219 1e-55
(Q07DV7) RecName: Full=F-actin-capping protein subunit alpha-2; ... 219 2e-55
AY892521_1(AY892521|pid:none) Synthetic construct Homo sapiens c... 218 3e-55
(A0M8R8) RecName: Full=F-actin-capping protein subunit alpha-2; ... 218 3e-55
(Q00PJ7) RecName: Full=F-actin-capping protein subunit alpha-2; ... 218 3e-55
(Q4R5G1) RecName: Full=F-actin-capping protein subunit alpha-2; ... 218 3e-55
BT072398_1(BT072398|pid:none) Salmo salar clone ssal-rgf-524-009... 217 8e-55
(Q2QLA8) RecName: Full=F-actin-capping protein subunit alpha-2; ... 217 8e-55
(Q07E23) RecName: Full=F-actin-capping protein subunit alpha-2; ... 216 1e-54
(A0M8S9) RecName: Full=F-actin-capping protein subunit alpha-2; ... 216 1e-54
(Q09YJ9) RecName: Full=F-actin-capping protein subunit alpha-2; ... 216 1e-54
(Q2QL88) RecName: Full=F-actin-capping protein subunit alpha-2; ... 216 1e-54
BT074988_1(BT074988|pid:none) Osmerus mordax clone omor-eva-508-... 216 1e-54
(Q2QLH5) RecName: Full=F-actin-capping protein subunit alpha-2; ... 216 2e-54
(Q09YN4) RecName: Full=F-actin-capping protein subunit alpha-2; ... 216 2e-54
AM410995_1(AM410995|pid:none) Sus scrofa mRNA for F-actin cappin... 215 2e-54
(Q108U5) RecName: Full=F-actin-capping protein subunit alpha-2; ... 215 3e-54
(P28497) RecName: Full=F-actin-capping protein subunit alpha-2; ... 214 4e-54
(Q9W2N0) RecName: Full=F-actin-capping protein subunit alpha; &... 214 4e-54
(A4D7S9) RecName: Full=F-actin-capping protein subunit alpha-2; ... 214 4e-54
(Q2QL78) RecName: Full=F-actin-capping protein subunit alpha-2; ... 214 5e-54
(A1X151) RecName: Full=F-actin-capping protein subunit alpha-2; ... 214 6e-54
(Q2QL99) RecName: Full=F-actin-capping protein subunit alpha-2; ... 214 6e-54
BT043615_1(BT043615|pid:none) Salmo salar clone HM4_3588 capping... 213 8e-54
BC072853_1(BC072853|pid:none) Xenopus laevis MGC80246 protein, m... 212 2e-53
(P13127) RecName: Full=F-actin-capping protein subunit alpha-1; ... 209 2e-52
AK166484_1(AK166484|pid:none) Mus musculus mammary gland RCB-052... 206 1e-51
(Q4R959) RecName: Full=F-actin-capping protein subunit alpha-1; ... 204 5e-51
AY890784_1(AY890784|pid:none) Synthetic construct Homo sapiens c... 204 7e-51
AK223226_1(AK223226|pid:none) Homo sapiens mRNA for F-actin capp... 203 9e-51
(A4FUA8) RecName: Full=F-actin-capping protein subunit alpha-1; ... 203 1e-50
BC067322_1(BC067322|pid:none) Xenopus tropicalis capping protein... 202 1e-50
BC067561_1(BC067561|pid:none) Danio rerio capping protein (actin... 201 3e-50
(P47753) RecName: Full=F-actin-capping protein subunit alpha-1; ... 201 4e-50
AK147049_1(AK147049|pid:none) Mus musculus 17 days embryo heart ... 201 6e-50
AL845328_1(AL845328|pid:none) Zebrafish DNA sequence from clone ... 200 7e-50
AK151253_1(AK151253|pid:none) Mus musculus bone marrow macrophag... 200 7e-50
BC067631_1(BC067631|pid:none) Danio rerio si:dkey-16k6.1, mRNA (... 200 7e-50
BC060481_1(BC060481|pid:none) Xenopus laevis nuclear actin-bindi... 199 2e-49
BT075792_1(BT075792|pid:none) Caligus rogercresseyi clone crog-e... 194 5e-48
BT080403_1(BT080403|pid:none) Caligus clemensi clone ccle-evs-51... 193 9e-48
AP005247_16(AP005247|pid:none) Oryza sativa Japonica Group genom... 186 1e-45
BT078530_1(BT078530|pid:none) Lepeophtheirus salmonis Pacific fo... 186 1e-45
AM423509_1(AM423509|pid:none) Vitis vinifera contig VV78X227158.... 181 4e-44
BT088215_1(BT088215|pid:none) Zea mays full-length cDNA clone ZM... 176 1e-42
AK015979_1(AK015979|pid:none) Mus musculus adult male testis cDN... 175 3e-42
(O82631) RecName: Full=F-actin-capping protein subunit alpha; Al... 172 3e-41
AJ001855_1(AJ001855|pid:none) Arabidopsis thaliana mRNA for alph... 171 4e-41
AY815769_1(AY815769|pid:none) Schistosoma japonicum SJCHGC01083 ... 165 3e-39
(P34685) RecName: Full=F-actin-capping protein subunit alpha; &... 165 3e-39
BT071969_1(BT071969|pid:none) Salmo salar clone ssal-rgf-505-218... 145 3e-33
AK293405_1(AK293405|pid:none) Homo sapiens cDNA FLJ50113 complet... 142 2e-32
AM920435_1543(AM920435|pid:none) Penicillium chrysogenum Wiscons... 137 6e-31
AJ719691_1(AJ719691|pid:none) Gallus gallus partial mRNA for hyp... 136 1e-30
AM270238_24(AM270238|pid:none) Aspergillus niger contig An11c021... 131 4e-29
(Q4WMF7) RecName: Full=F-actin-capping protein subunit alpha; 127 6e-28
(Q5BBF4) RecName: Full=F-actin-capping protein subunit alpha; 126 2e-27
(Q4I2D7) RecName: Full=F-actin-capping protein subunit alpha; 122 3e-26
BT066887_1(BT066887|pid:none) Zea mays full-length cDNA clone ZM... 122 3e-26
FN374735_1(FN374735|pid:none) Schistosoma mansoni genome sequenc... 116 2e-24
CU633895_210(CU633895|pid:none) Podospora anserina genomic DNA c... 112 3e-23
BT041399_1(BT041399|pid:none) Zea mays full-length cDNA clone ZM... 106 1e-21
BT082412_1(BT082412|pid:none) Anoplopoma fimbria clone afim-evh-... 104 5e-21
BT081012_1(BT081012|pid:none) Caligus clemensi clone ccle-evs-51... 104 5e-21
(O74232) RecName: Full=F-actin-capping protein subunit alpha; &... 100 8e-20
AE017342_458(AE017342|pid:none) Cryptococcus neoformans var. neo... 97 1e-18
(P28495) RecName: Full=F-actin-capping protein subunit alpha; &... 96 3e-18
AX885319_1(AX885319|pid:none) Sequence 1182 from Patent EP1033401. 91 6e-17
(Q10434) RecName: Full=F-actin-capping protein subunit alpha; &... 91 6e-17
(Q75DS4) RecName: Full=F-actin-capping protein subunit alpha; &... 90 2e-16
BC109951_1(BC109951|pid:none) Bos taurus capping protein (actin ... 88 7e-16
AF072674_2(AF072674|pid:none) Kluyveromyces lactis Sft1p (SFT1) ... 86 2e-15
AM910992_38(AM910992|pid:none) Plasmodium knowlesi strain H chro... 85 5e-15
BC078870_1(BC078870|pid:none) Rattus norvegicus capping protein ... 85 6e-15
FM992695_108(FM992695|pid:none) Candida dubliniensis CD36 chromo... 84 1e-14
(Q9WUV6) RecName: Full=F-actin-capping protein subunit alpha-3; ... 84 1e-14
(P70190) RecName: Full=F-actin-capping protein subunit alpha-3; ... 83 2e-14
CU928174_48(CU928174|pid:none) Zygosaccharomyces rouxii strain C... 82 5e-14
EU735102_1(EU735102|pid:none) Plasmodium berghei strain ANKA F-a... 81 7e-14
(Q5A893) RecName: Full=F-actin-capping protein subunit alpha; 81 7e-14
BC003915_1(BC003915|pid:none) Mus musculus capping protein (acti... 70 1e-10
AY973541_7(AY973541|pid:none) Hyaloperonospora parasitica isolat... 61 7e-08
DQ472199_1(DQ472199|pid:none) Trypanosoma cruzi strain CL Brener... 49 5e-04
CP001322_2327(CP001322|pid:none) Desulfatibacillum alkenivorans ... 38 0.63
AY548889_1(AY548889|pid:none) Antonospora locustae coatomer beta... 38 0.83
CU458874_1(CU458874|pid:none) Danio rerio cDNA, clone cssl:d0817. 36 2.4
AC134045_38(AC134045|pid:none) Oryza sativa (japonica cultivar-g... 36 3.1
BC082504_1(BC082504|pid:none) Xenopus tropicalis csf1r protein, ... 36 3.1
CR382132_970(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 36 3.1
BC171602_1(BC171602|pid:none) Danio rerio sc:d0175, mRNA (cDNA c... 35 4.1
BX842649_295(BX842649|pid:none) Bdellovibrio bacteriovorus compl... 35 4.1
AY353467_1(AY353467|pid:none) Salmonella enterica strain CDC str... 35 5.3
AM286415_148(AM286415|pid:none) Yersinia enterocolitica subsp. e... 35 7.0
AE005176_8(AE005176|pid:none) Lactococcus lactis subsp. lactis I... 35 7.0
AM236080_928(AM236080|pid:none) Rhizobium leguminosarum bv. vici... 35 7.0
(Q59LC9) RecName: Full=Protein AF-9 homolog; &AP006852_348(AP00... 35 7.0
AM494949_74(AM494949|pid:none) Leishmania braziliensis chromosom... 34 9.1
AB182480_1(AB182480|pid:none) Tetrahymena thermophila DCR2 mRNA ... 34 9.1
>(P13022) RecName: Full=F-actin-capping protein subunit alpha;
AltName: Full=Aginactin subunit alpha; AltName:
Full=CAP34; &B61042(B61042;B34334;B30945)
&M25132_1(M25132|pid:none)
Length = 281
Score = 564 bits (1454), Expect = e-159
Identities = 281/281 (100%), Positives = 281/281 (100%)
Frame = +1
Query: 175 MASNQELVQIATNFLLNAPPCEFMEVVSDVRALLPSESLLNASAGSTFREYNTSQMVSVQ 354
MASNQELVQIATNFLLNAPPCEFMEVVSDVRALLPSESLLNASAGSTFREYNTSQMVSVQ
Sbjct: 1 MASNQELVQIATNFLLNAPPCEFMEVVSDVRALLPSESLLNASAGSTFREYNTSQMVSVQ 60
Query: 355 TSKGSALITKEGEISNNEYLDPKNKQVITYDHIKQEVTGERSASGEIEQDIEQYRAAFDE 534
TSKGSALITKEGEISNNEYLDPKNKQVITYDHIKQEVTGERSASGEIEQDIEQYRAAFDE
Sbjct: 61 TSKGSALITKEGEISNNEYLDPKNKQVITYDHIKQEVTGERSASGEIEQDIEQYRAAFDE 120
Query: 535 EATKYCNEYYPNGVSAVYGTKVSEGIKITVCISTCIYKPNAFYSGRWRSVWTCTFKPGSG 714
EATKYCNEYYPNGVSAVYGTKVSEGIKITVCISTCIYKPNAFYSGRWRSVWTCTFKPGSG
Sbjct: 121 EATKYCNEYYPNGVSAVYGTKVSEGIKITVCISTCIYKPNAFYSGRWRSVWTCTFKPGSG 180
Query: 715 NVTSNGKVQVNVHYFEDGNVQLNTVTQKQTTSPSADAQSTAVNAFKAIGKAELNLHTALD 894
NVTSNGKVQVNVHYFEDGNVQLNTVTQKQTTSPSADAQSTAVNAFKAIGKAELNLHTALD
Sbjct: 181 NVTSNGKVQVNVHYFEDGNVQLNTVTQKQTTSPSADAQSTAVNAFKAIGKAELNLHTALD 240
Query: 895 NNYSTMGDTTFKALRRALPINRTKINWQKVKNFKIANELNK 1017
NNYSTMGDTTFKALRRALPINRTKINWQKVKNFKIANELNK
Sbjct: 241 NNYSTMGDTTFKALRRALPINRTKINWQKVKNFKIANELNK 281
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,611,734,542
Number of extensions: 29560341
Number of successful extensions: 91432
Number of sequences better than 10.0: 100
Number of HSP's gapped: 91142
Number of HSP's successfully gapped: 101
Length of query: 402
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 271
Effective length of database: 627,191,635
Effective search space: 169968933085
Effective search space used: 169968933085
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
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