<Clone: Contig-U14136-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Contig-U14136-1

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Assembled

Chromosomal Location of Contig-U14136-1

< more Chromosomal info >

Chromosome Number 6
Length 3595308
Start Poin 3,050,924
End Point 3,051,387
Strand PLUS

Sequence Contig-U14136-1

AAATTTTTTG GTATTTAAAA GAAATATATA ATTGTTTTAT TATAATCAAA
TAATTTTATA AAATATCAAA AGCAACAATA AAATCTACAT TATAAAAATG
ACAATATTAA AATCGATTAC TAGTTTTACA TTTAATATTA AAAATAATAA
TAATAATAAT AAAATAAATA ATATAAATGT TAAAAATAAT TTTTCAAATA
ATATAATATC AGAATCTTCA ACATTGGTAC ATTTTAAACT ATGGAGAGGT
GGTACATGGC TTGATATTGC AATGGATGAT AGAGTTTCCA TATATACACT
TTGTTAAATT TTTAATAATA ATATTATTAT ATATATTTTT TGTTGTATAA
TAACAAATTA ATTTATTTAT TATTCCAATC CTCCATCCAA TTCCTTTATT
TATTCAAAAT TATAAAAAAA AAAAAAAAAA NTATTAAATT TNTTTNNTTT
TTTTAAAAAA AAAA

Translated Amino Acid Sequence Contig-U14136-1

<All Frames> 
nflvfkrni*lfyynqiil*NIKSNNKIYIIKMTILKSITSFTFNIKNNNNNNKINNINV
KNNFSNNIISESSTLVHFKLWRGGTWLDIAMDDRVSIYTLC*ifnnniiiyifcciitn*
fiyysnppsnsfiyskl*kkkkkxlnxfxffkkk


Homology Contig-U14136-1 vs CSM-Contig

<more CONTIG info> 
Sequences producing significant alignments:                        (bits)  Value


Contig-U14136-1 (Contig-U14136-1Q) /CSM_Contig/Conti...   161  8e-40
Contig-U11036-1 (Contig-U11036-1Q) /CSM_Contig/Conti...    36  0.032
Contig-U01085-1 (Contig-U01085-1Q) /CSM_Contig/Conti...    36  0.032
Contig-U12870-1 (Contig-U12870-1Q) /CSM_Contig/Conti...    34  0.13
Contig-U05861-1 (Contig-U05861-1Q) /CSM_Contig/Conti...    34  0.13
Contig-U01503-1 (Contig-U01503-1Q) /CSM_Contig/Conti...    34  0.13
Contig-U13597-1 (Contig-U13597-1Q) /CSM_Contig/Conti...    32  0.50
Contig-U13346-1 (Contig-U13346-1Q) /CSM_Contig/Conti...    32  0.50
Contig-U12894-1 (Contig-U12894-1Q) /CSM_Contig/Conti...    32  0.50
Contig-U12546-1 (Contig-U12546-1Q) /CSM_Contig/Conti...    32  0.50


Homology Contig-U14136-1 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(AU075083) Dictyostelium discoideum slug cDNA, clone SSA204.      161   1e-39  2
(AU072663) Dictyostelium discoideum slug cDNA, clone SSA484.      161   1e-39  2
(BJ378773) Dictyostelium discoideum cDNA clone:ddc32e21, 3' ...   161   1e-39  2
(BJ355892) Dictyostelium discoideum cDNA clone:dda58f15, 3' ...   161   2e-39  2
(BJ364744) Dictyostelium discoideum cDNA clone:ddc32e21, 5' ...   161   2e-39  2
(BJ337744) Dictyostelium discoideum cDNA clone:dda58f15, 5' ...   161   2e-39  2
(CU467567) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   4.9    1


Homology Contig-U14136-1 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AL954831_9(AL954831|pid:none) Zebrafish DNA sequence from clone ...    35   0.81
BT058958_1(BT058958|pid:none) Salmo salar clone ssal-rgf-516-040...    34   1.8
(Q6ZSI9) RecName: Full=Calpain-12;          EC=3.4.22.-;  &AK127...    34   1.8
(Q9VT65) RecName: Full=Calpain-B;          EC=3.4.22.-; AltName:...    33   2.4
A55054(A55054) calpain (EC 3.4.22.17) large chain - fruit fly (D...    33   2.4
X78555_1(X78555|pid:none) D.melanogaster mRNA for calpain.             33   2.4
AF062404_1(AF062404|pid:none) Drosophila melanogaster calpain mR...    33   2.4
Z46891_1(Z46891|pid:none) D.melanogaster mRNA for Calpain.             33   2.4
AL132848_2(AL132848|pid:none) Caenorhabditis elegans YAC Y47H10A...    33   3.1
BC042349_1(BC042349|pid:none) Xenopus laevis calpain 8, mRNA (cD...    33   3.1


<Clone: Contig-U14136-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>

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