Dictyostelium discoideum cDNA Contig-U14096-1

Assembled

Chromosomal Location of Contig-U14096-1

Sequence Contig-U14096-1

CTTTAAGCAT AAACGGTGAA TACCTCGACT CCTAAATCGA TGAAGACCGT
AGCAAACTGC GATAATTCAC TTGAATTGCA GCCTACTGGG ATAGTTGAAA
TGTTGAACGC ACATGATGAC ATCGGTCCTT TCGGATTAGG TGTTATACTT
GGGTGAGAGT GGTCAATAAG AATGAAAGTT TCATTATTAA TTTTTTTAAT
AATTTTAGTT GGAGTAATTA AATCATTTGA TATTAATTCA ATTGATGATT
CACATTGGGA ATCTGATGAA GGATTTGAAC ATCATAAATG TTGGAAAAAT
TTAACTGGTT ATTATACAGA ATTTGCTTTG TCTGCTTATA ATACTATGTT
CCCAACACCA TATGGAGTTA TTCCAGTTTC ATTTTATGAA GGTGGTGTTG
TTACTGCTGA TATTAAAGGT CAACAAATGT ATGTCCACTA TGGTATTGTT
GCAAAAAATT TCACAACATG GGGACAATAC TATGCCTATG GTAAAAATCA
AACCCAATAT GTTGTAAACA ATTCAAGCTG TGTTGCAATG AAATTACAAT
TCCCATTCCC AGATAAACTT CCAAAATTCA AAAAAGTAGG AACTACAAAA
ATTGGTCAAA CCGATGTTGA TGTATGGGAT TGTCCAAGGT AAACAACAAT
GCAATGTCAC CAGGTCTTGT ATTCTAATTC AAAAAGATCC ATGTACCCTT
ATGTCTGCCA ATTTCGGTAA CAAAGATAAA TCAAATCTAG GTTTCTCACT
TTTAAATTAT TATAGGTATG AAAATAACCC CCATTATGAT AAATTCCAAT
TACCATCAAA AATGTTGGGA TGTTAAACCC AAAGATGAAA ATGAAATTAA
GGAGGAACAG GGGTTTATTT GCAAATGAGG AGGAACTGGA AAATAAAGAA
TATTTTGGTG ATAACCAACA GGCTCCATCA ATGGGAATTT CTAAAAATAA
TCCCCCTCTA AATAATAATA ATAATAATAA AAAATATCAT CTTGGGGAAC
ATGAAACACC AAATCCAGAC CTTTTCAAAA CAACCACAAA AACATCAACA
AAAACAACAT CATTTTCAAG GGCCACTAAT GATTCCCCAA AATCAATTGA
TTTCCATCAC TTATTTTAAT TTTTAAATTC TAAATAAAGT TTAAATTTAA
ATATTTTCTT TTGTTTTTTT TTTTTTAAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
A

Translated Amino Acid Sequence Contig-U14096-1

l*a*tvntstpksmktvancdnslelqptgivemlnahddigpfglgvilg*EWSIRMKV
SLLIFLIILVGVIKSFDINSIDDSHWESDEGFEHHKCWKNLTGYYTEFALSAYNTMFPTP
YGVIPVSFYEGGVVTADIKGQQMYVHYGIVAKNFTTWGQYYAYGKNQTQYVVNNSSCVAM
KLQFPFPDKLPKFKKVGTTKIGQTDVDVWDCPR*ttmqchqvlysnskrsmypyvcqfr*
qr*iksrfltfkll*v*k*ppl**ipitiknvgmlnpkmkmklrrnrglfaneeelenke
yfgdnqqapsmgisknnpplnnnnnnkkyhlgehetpnpdlfktttktstkttsfsratn
dspksidfhhlf*flnsk*slnlniffcffffkkkkkkkkkkkkkkkkkkkkkkkkk

Homology Contig-U14096-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U14096-1 (Contig-U14096-1Q) /CSM_Contig/Conti...  1824  0.0
Contig-U13298-1 (Contig-U13298-1Q) /CSM_Contig/Conti...   329  4e-90
Contig-U13829-1 (Contig-U13829-1Q) /CSM_Contig/Conti...   317  2e-86
Contig-U10919-1 (Contig-U10919-1Q) /CSM_Contig/Conti...   317  2e-86
Contig-U14050-1 (Contig-U14050-1Q) /CSM_Contig/Conti...   315  6e-86
Contig-U12678-1 (Contig-U12678-1Q) /CSM_Contig/Conti...   315  6e-86
Contig-U12648-1 (Contig-U12648-1Q) /CSM_Contig/Conti...   315  6e-86
Contig-U11677-1 (Contig-U11677-1Q) /CSM_Contig/Conti...   315  6e-86
Contig-U14527-1 (Contig-U14527-1Q) /CSM_Contig/Conti...   313  3e-85
Contig-U14524-1 (Contig-U14524-1Q) /CSM_Contig/Conti...   313  3e-85

Homology Contig-U14096-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ391015) Dictyostelium discoideum cDNA clone:dds14m15, 5' ...   791   0.0    2
(BJ335565) Dictyostelium discoideum cDNA clone:dda50a22, 5' ...   844   0.0    3
(BJ388418) Dictyostelium discoideum cDNA clone:dds9p10, 5' e...   811   0.0    2
(C94011) Dictyostelium discoideum slug cDNA, clone SSK701.        305   0.0    6
(C94381) Dictyostelium discoideum slug cDNA, clone SSF594.        305   0.0    6
(C90897) Dictyostelium discoideum slug cDNA, clone SSJ281.        496   0.0    5
(C94349) Dictyostelium discoideum slug cDNA, clone SSK867.        305   0.0    6
(AU039062) Dictyostelium discoideum slug cDNA, clone SSM335.      305   e-169  6
(C91391) Dictyostelium discoideum slug cDNA, clone SSK159.        305   e-167  6
(C90485) Dictyostelium discoideum slug cDNA, clone SSI591.        297   e-162  6

Homology Contig-U14096-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116550_6(AC116550|pid:none) Dictyostelium discoideum chromosom...    54   1e-05
AC116550_3(AC116550|pid:none) Dictyostelium discoideum chromosom...    54   1e-05
CP000685_2031(CP000685|pid:none) Flavobacterium johnsoniae UW101...    37   1.1