Dictyostelium discoideum cDNA Contig-U14095-1

Assembled

Chromosomal Location of Contig-U14095-1

Sequence Contig-U14095-1

---------- TAAATACAGT ATTTCCACAT GTTGAAATTG TTGATGATGA
ATGTGCCTTT GGTAGAAATT CAACTTGTCA AGTTATATTC ACAGATAAGA
AAATTAGTTC AAAACATTGT AGATTTTACA GAAAAAAAAA TGAAGGTCAA
GTTGATTATA GTTTTTATCT TGATGATTAT AGTTCAAATG GTACATTTGT
AAATAGAAAA AGAGTTGGAA AAGGTAATAC AGTACCAATT GTAAATGGTA
ATGAAATTTC ATTATCAACA ACAATAGAAC AATCTGATCC AACTAGAGTT
GTTTATATAT TTTATGATTT AGAAAAATTA AGAAGAGAAG AAGAAGAAGA
AAATAAAAAA AAAGAGAATG AAGAAAGTGG TTTCACATTG GCAGCAGATG
ATATTACAAA TGAAATCTCT GATTTAAGTG ATATGTCTCC AATAAAAAAA
CAAAATAGTA ATTTATCAAC AAATAGTGAT AATAATGATT CAACAACCAC
AACAACAACT TCAATAAAAA CTTCAACTTC AAAAT

Translated Amino Acid Sequence Contig-U14095-1

XXXXNTVFPHVEIVDDECAFGRNSTCQVIFTDKKISSKHCRFYRKKNEGQVDYSFYLDDY
SSNGTFVNRKRVGKGNTVPIVNGNEISLSTTIEQSDPTRVVYIFYDLEKLRREEEEENKK
KENEESGFTLAADDITNEISDLSDMSPIKKQNSNLSTNSDNNDSTTTTTTSIKTSTSK

Homology Contig-U14095-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U14095-1 (Contig-U14095-1Q) /CSM_Contig/Conti...   892  0.0
Contig-U12535-1 (Contig-U12535-1Q) /CSM_Contig/Conti...    50  2e-06
Contig-U10198-1 (Contig-U10198-1Q) /CSM_Contig/Conti...    46  4e-05
Contig-U14852-1 (Contig-U14852-1Q) /CSM_Contig/Conti...    42  6e-04
Contig-U14883-1 (Contig-U14883-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U14107-1 (Contig-U14107-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U13963-1 (Contig-U13963-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U12746-1 (Contig-U12746-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U12491-1 (Contig-U12491-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U14660-1 (Contig-U14660-1Q) /CSM_Contig/Conti...    38  0.009

Homology Contig-U14095-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ353438) Dictyostelium discoideum cDNA clone:dda50m06, 3' ...   357   0.0    4
(AU271261) Dictyostelium discoideum vegetative cDNA clone:VS...   101   3e-17  1
(FE829916) CCAG42498.g1 CCAG Petrolisthes cinctipes heart, g...    56   0.001  1
(FE768045) CCAG4142.g1 CCAG Petrolisthes cinctipes heart, gi...    56   0.001  1
(FE768044) CCAG4142.b3 CCAG Petrolisthes cinctipes heart, gi...    56   0.001  1
(FE379959) CBNS4184.rev CBNS_Daphnia_pulex_Chosen_One_Librar...    38   0.019  2
(EC825751) SME00002554 esmbsro2 Sawyeria marylandensis cDNA,...    52   0.023  1
(EC824904) SME00007735 esmbsro2 Sawyeria marylandensis cDNA,...    52   0.023  1
(CU929154) Zebrafish DNA sequence from clone CH73-329G8 in l...    38   0.059  2
(DC482237) Monosiga ovata cDNA, clone: MOC-046N19, 5'end.          40   0.072  2

Homology Contig-U14095-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P34101) RecName: Full=Probable serine/threonine-protein kinase ...    69   8e-11
FJ211197_1(FJ211197|pid:none) Sus scrofa protein kinase CHK2 iso...    68   1e-10
(Q54VI1) RecName: Full=Probable serine/threonine-protein kinase ...    67   2e-10
AY893855_1(AY893855|pid:none) Synthetic construct Homo sapiens c...    65   1e-09
AF134054_1(AF134054|pid:none) Rattus norvegicus checkpoint kinas...    65   1e-09
AK289360_1(AK289360|pid:none) Homo sapiens cDNA FLJ78721 complet...    65   1e-09
AY551298_1(AY551298|pid:none) Homo sapiens protein kinase Chk2 t...    65   1e-09
AY551300_1(AY551300|pid:none) Homo sapiens protein kinase Chk2 t...    65   1e-09
EF043684_1(EF043684|pid:none) Synthetic construct clone ATCC 103...    64   2e-09
AF326574_1(AF326574|pid:none) Xenopus laevis protein kinase Cds1...    63   4e-09