Dictyostelium discoideum cDNA Contig-U13994-1

Assembled

Chromosomal Location of Contig-U13994-1

Sequence Contig-U13994-1

AATTCTGACA ATTTATTTTT TTTTTTTTTA TATTTTATTT TTTTAAAATT
ATTCAAAAAT CCAACAATTA TTGTTTATAC AAAAATAAAA CTTTAGCAAT
AACAATAATA ACATATACAT ATACAAATAA AATAAAATGA GTGACAATTT
AAAATCATAC CAAGATAATC ATATTGAAAA TGAAGATGAA GAAATTTATG
AAAGATCAAA TGGAAAAGGA AAGGAATTAG TTGATTTTGG AAAGAAGAGA
GAACCATTAA TCCATAACCA TGAAGTTTTA AATACAATGC AATCATCAGT
AAAGACATTA TTAAGTAGTT TAGGTGAAGA TCCAGATAGA GAAGGTTTAT
TAAAGACACC ATTAAGAATG TCAAAGGCTT TATTATTTTT TACACAAGGT
TATGAGCAAT CTGTTGATGA AGTTATTGGT GAAGCAATTT TTAATGAAAA
TCATCATGAA ATGGTTGTTG TCAGAGATAT TGATATATTT TCATTATGTG
AACATCATAT GGTGCCATTC CATGGTAAAT GCCATATTGG TTATATTCCA
GATCAAAAAG TTTTAGGTTT AAGTAAATTA GCAAGAGTTG CTGAAATTTT
TGCCAGAAGG TTACAAGTTC AAGAACGTTT AACCAGACAA ATAGCACAAG
CAATTCAAGC TCACTTAAAT CCAATGGGTG TTGCCGTCGT AATTGAAGCA
TCACACATGT GTATGGTTAT GAGAGGTGTA CAAAAACCAG GTGCAAGTAC
TGTCACCTCA TCTGTTTGCG GTATTTTTGA AAAAGACTCT AGAACTCGTG
CTGAATTCTT TAGTTTAATT AAATCAAATA AATAATAATA ATAATTATAA
ATAATAATAA AAAAAAAAAC TAAAAAATTA AAAACTAAAA AAAAAAAAAA
AACAAACTAC AGTAATAACA ATAATCCTCC TCTTCCTTCC TTTTTCCTAC
CTTCTCCACC TTTTTATCTT CAAATGTATA ATTCTATTTA AAGAAAAAAA
AAAAATAAAA AAAAAAACAA TAAAAAAAAA AAAATAATAA TCAAAAACTA
TATTAAAAAA TAAAAAAAAA AAAAAAA

Translated Amino Acid Sequence Contig-U13994-1

iltiyffffyilff*nyskiqqllfiqk*nfsnnnnniyiyk*NKMSDNLKSYQDNHIEN
EDEEIYERSNGKGKELVDFGKKREPLIHNHEVLNTMQSSVKTLLSSLGEDPDREGLLKTP
LRMSKALLFFTQGYEQSVDEVIGEAIFNENHHEMVVVRDIDIFSLCEHHMVPFHGKCHIG
YIPDQKVLGLSKLARVAEIFARRLQVQERLTRQIAQAIQAHLNPMGVAVVIEASHMCMVM
RGVQKPGASTVTSSVCGIFEKDSRTRAEFFSLIKSNK****l*iiikkktkklktkkkkk
tnysnnnnpplpsfflpsppfylqmynsi*rkkknkkknnkkkkiiiknyikk*kkkk

Homology Contig-U13994-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13994-1 (Contig-U13994-1Q) /CSM_Contig/Conti...  1342  0.0
Contig-U06796-1 (Contig-U06796-1Q) /CSM_Contig/Conti...   276  5e-74
Contig-U14239-1 (Contig-U14239-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U06050-1 (Contig-U06050-1Q) /CSM_Contig/Conti...    40  0.005
Contig-U10961-1 (Contig-U10961-1Q) /CSM_Contig/Conti...    36  0.076
Contig-U09453-1 (Contig-U09453-1Q) /CSM_Contig/Conti...    36  0.076
Contig-U08437-1 (Contig-U08437-1Q) /CSM_Contig/Conti...    36  0.076
Contig-U14573-1 (Contig-U14573-1Q) /CSM_Contig/Conti...    34  0.30
Contig-U13062-1 (Contig-U13062-1Q) /CSM_Contig/Conti...    34  0.30
Contig-U12579-1 (Contig-U12579-1Q) /CSM_Contig/Conti...    34  0.30

Homology Contig-U13994-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU263402) Dictyostelium discoideum vegetative cDNA clone:VS...  1300   0.0    1
(Z49706) D.discoideum mRNA for GTP cyclohydrolase I.             1253   0.0    1
(AU269325) Dictyostelium discoideum vegetative cDNA clone:VS...  1187   0.0    1
(AU270589) Dictyostelium discoideum vegetative cDNA clone:VS...  1061   0.0    1
(AU262610) Dictyostelium discoideum vegetative cDNA clone:VS...  1041   0.0    1
(AU267047) Dictyostelium discoideum vegetative cDNA clone:VS...  1019   0.0    1
(AU267853) Dictyostelium discoideum vegetative cDNA clone:VS...   993   0.0    2
(AU261663) Dictyostelium discoideum vegetative cDNA clone:VS...   981   0.0    1
(BJ330352) Dictyostelium discoideum cDNA clone:dda31c07, 5' ...   880   0.0    2
(AU270896) Dictyostelium discoideum vegetative cDNA clone:VS...   854   0.0    1

Homology Contig-U13994-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q94465) RecName: Full=GTP cyclohydrolase 1;          EC=3.5.4.1...   463   e-129
AF318067_1(AF318067|pid:none) Physarum polycephalum GTP cyclohyd...   276   7e-73
(Q8YLL1) RecName: Full=GTP cyclohydrolase 1 1;          EC=3.5.4...   254   4e-66
CP000117_2526(CP000117|pid:none) Anabaena variabilis ATCC 29413,...   253   6e-66
CP000828_5499(CP000828|pid:none) Acaryochloris marina MBIC11017,...   253   8e-66
(B2J1L7) RecName: Full=GTP cyclohydrolase 1;          EC=3.5.4.1...   251   4e-65
CP000951_2403(CP000951|pid:none) Synechococcus sp. PCC 7002, com...   250   5e-65
AY120852_31(AY120852|pid:none) Synechococcus sp. PCC 7942 PacS, ...   250   7e-65
U59236_8(U59236|pid:none) Synechococcus PCC7942 ribosomal protei...   250   7e-65
(Q54769) RecName: Full=GTP cyclohydrolase 1;          EC=3.5.4.1...   250   7e-65