Homology Contig-U13988-1 vs Protein

Query= Contig-U13988-1 (Contig-U13988-1Q) /CSM_Contig/Contig-U13988-1Q.Seq.d
         (1297 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116551_32(AC116551|pid:none) Dictyostelium discoideum chromoso...   333   e-123
BX295539_16(BX295539|pid:none) Neurospora crassa genomic DNA, BA...    35   5.9

>AC116551_32(AC116551|pid:none) Dictyostelium discoideum chromosome 2
            map complement(581327-427576) strain AX4, complete
            sequence.
          Length = 799

 Score =  333 bits (853), Expect(2) = e-123
 Identities = 185/287 (64%), Positives = 185/287 (64%)
 Frame = +1

Query: 397  K*FTTDSNGYSTNINSRTXXXXXXXXXXGNRPLTASQSYIMNETVEYQDAFAKESNDIAN 576
            K  TTDSNGYSTNINSRT          GNRPLTASQSYIMNETVEYQDAFAKESNDIAN
Sbjct: 94   KIITTDSNGYSTNINSRTPSKPPSSSSSGNRPLTASQSYIMNETVEYQDAFAKESNDIAN 153

Query: 577  NIKTPNRPQHQYQQPQHFTTQPVYQPSYQSNSYDXXXXXXXXXXXXXXXXXXXXXXXXXX 756
            NIKTPNRPQHQYQQPQHFTTQPVYQPSYQSNSYD
Sbjct: 154  NIKTPNRPQHQYQQPQHFTTQPVYQPSYQSNSYDHQNKQQQQQQQQQYQHQNQHQNQNEH 213

Query: 757  XXXXXXXXGVDVENIXXXXXXXXXXQQTPYNRSEEYILGMERQLAFYKSLLKEKSNYKFS 936
                    GVDVENI          QQTPYNRSEEYILGMERQLAFYKSLLKEKSNYKFS
Sbjct: 214  QNQNEHHNGVDVENIPPPSSSSSSSQQTPYNRSEEYILGMERQLAFYKSLLKEKSNYKFS 273

Query: 937  NTQASGQXXXXXXXXXXXXXXXQRSYGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLK 1116
            NTQASGQ               QRSYGL                              LK
Sbjct: 274  NTQASGQPPPPTTTNNYTTTTTQRSYGLNQQPSSPPTTTTTTTTTNENQQQKQSTTNNLK 333

Query: 1117 STTAATTSSGYFIDENDSIIKKRLDEMTDKIYLQEEEISDNLXTIEQ 1257
            STTAATTSSGYFIDENDSIIKKRLDEMTDKIYLQEEEISDNL TIEQ
Sbjct: 334  STTAATTSSGYFIDENDSIIKKRLDEMTDKIYLQEEEISDNLKTIEQ 380

 Score =  132 bits (333), Expect(2) = e-123
 Identities = 66/96 (68%), Positives = 66/96 (68%)
 Frame = +3

Query: 117 MSYQYDQQHINNESMTHTPNRSRPIFGHTNIPITPIRSTQSPTTPLRPXXXXXXXXXXXX 296
           MSYQYDQQHINNESMTHTPNRSRPIFGHTNIPITPIRSTQSPTTPLRP
Sbjct: 1   MSYQYDQQHINNESMTHTPNRSRPIFGHTNIPITPIRSTQSPTTPLRPNSGNNNNNNNNG 60

Query: 297 XXXXXXXXXXXXXXXXXXHHLKPNGVKFGVTNPKII 404
                             HHLKPNGVKFGVTNPKII
Sbjct: 61  TNNNNNNNETSGNNLNFNHHLKPNGVKFGVTNPKII 96

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,105,336,027
Number of extensions: 13127639
Number of successful extensions: 35628
Number of sequences better than 10.0: 2
Number of HSP's gapped: 35552
Number of HSP's successfully gapped: 3
Length of query: 432
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 301
Effective length of database: 627,191,635
Effective search space: 188784682135
Effective search space used: 188784682135
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)