Dictyostelium discoideum cDNA Contig-U13988-1

Assembled

Chromosomal Location of Contig-U13988-1

NO HIT FOUND.

Sequence Contig-U13988-1

CTGTTGGCCT ACTGGTTTTA AAACATATCA CTATTATTTA TAAACTAAAT
TATTTAATTA AATAAAAAAA TAAAATAAAA TAAAAAAACA AAAACAAAAG
ATAAAATAAT ACAAAAATGT CATATCAATA TGACCAACAA CATATTAATA
ATGAATCTAT GACCCATACA CCAAACAGAT CAAGACCAAT CTTTGGTCAT
ACTAATATAC CAATTACTCC AATAAGAAGT ACTCAATCGC CAACTACCCC
TTTAAGACCA AATAGTGGTA ATAATAATAA TAATAACAAC AATGGAACTA
ATAATAATAA TAATAATAAT GAAACTTCTG GTAATAATTT AAATTTTAAT
CATCATCTTA AACCAAATGG CGTTAAATTT GGAGTTACAA ATCCAAAAAT
AATTTACAAC AGATTCAAAT GGCTATTCTA CAAATATAAA TTCAAGAACT
CCTTCAAAAC CACCATCATC ATCATCATCA GGTAATAGGC CATTAACAGC
AAGTCAAAGT TATATTATGA ATGAAACAGT TGAATATCAA GATGCTTTTG
CCAAAGAATC CAATGATATT GCAAATAATA TTAAAACTCC AAATAGGCCA
CAGCATCAAT ATCAACAACC ACAACATTTT ACAACACAAC CAGTATACCA
ACCAAGTTAT CAATCAAATT CATATGATCA CCAAAATAAA CAACAACAAC
AACACCAACA ACAACAATAT CAACACCAAA ATCAACATCA AAATCAAAAT
GAACATCAAA ATCAAAATGA ACATCATAAT GGTGTTGATG TTGAAAATAT
ACCACCTCCA TCATCATCTT CCTCATCATC ACAACAAACA CCATATAATA
GAAGTGAAGA ATATATATTA GGTATGGAAA GACAATTAGC ATTTTATAAA
TCATTATTAA AGGAAAAATC AAACTATAAA TTTTCAAACA CTCAAGCTAG
TGGACAACCA CCGCCACCAA CAACAACCAA TAATTATACA ACCACCACTA
CACAAAGAAG TTATGGTTTA AATCAACAAC CATCTTCACC ACCAACAACA
ACAACAACAA CAACAACAAC AAATGAAAAT CAACAACAAA AACAATCAAC
AACTAATAAT TTAAAATCAA CAACAGCAGC AACAACATCA TCAGGATATT
TTATTGATGA AAATGATTCA ATAATTAAAA AGAGATTAGA TGAAATGACT
GATAAGATTT ATTTACAAGA GGAAGAGATT AGTGATAATT TGANAACCAT
AGAACAATTA TAAAACCCAA NNCCAGTTGT AACAAATACA CCAGTAA

Translated Amino Acid Sequence Contig-U13988-1

llaywf*nisllfin*ii*lnkkik*nkktktkdkiiqkchinmtnnilimnl*pihqtd
qdqslviliyqllq*evlnrqlpl*dqivviiiiittmeliiiiiimkllvii*iliiil
nqmalnlelqiqk*FTTDSNGYSTNINSRTPSKPPSSSSSGNRPLTASQSYIMNETVEYQ
DAFAKESNDIANNIKTPNRPQHQYQQPQHFTTQPVYQPSYQSNSYDHQNKQQQQHQQQQY
QHQNQHQNQNEHQNQNEHHNGVDVENIPPPSSSSSSSQQTPYNRSEEYILGMERQLAFYK
SLLKEKSNYKFSNTQASGQPPPPTTTNNYTTTTTQRSYGLNQQPSSPPTTTTTTTTTNEN
QQQKQSTTNNLKSTTAATTSSGYFIDENDSIIKKRLDEMTDKIYLQEEEISDNLXTIEQL
*npxpvvtntpv

Homology Contig-U13988-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13988-1 (Contig-U13988-1Q) /CSM_Contig/Conti...   545  e-155
Contig-U11307-1 (Contig-U11307-1Q) /CSM_Contig/Conti...    68  3e-11
Contig-U12180-1 (Contig-U12180-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U10609-1 (Contig-U10609-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U13546-1 (Contig-U13546-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U06430-1 (Contig-U06430-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U13688-1 (Contig-U13688-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11677-1 (Contig-U11677-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11273-1 (Contig-U11273-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U09260-1 (Contig-U09260-1Q) /CSM_Contig/Conti...    40  0.006

Homology Contig-U13988-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ346178) Dictyostelium discoideum cDNA clone:dda30i01, 3' ...   525   0.0    3
(BJ399495) Dictyostelium discoideum cDNA clone:dds6a09, 3' e...   525   0.0    4
(BJ328922) Dictyostelium discoideum cDNA clone:dda30i01, 5' ...   398   0.0    4
(BJ392487) Dictyostelium discoideum cDNA clone:dds27g22, 5' ...   398   0.0    7
(BJ388572) Dictyostelium discoideum cDNA clone:dds6a09, 5' e...   297   e-135  2
(BJ350551) Dictyostelium discoideum cDNA clone:dda40a12, 3' ...    50   5e-09  3
(AU269086) Dictyostelium discoideum vegetative cDNA clone:VS...    50   1e-06  2
(AU270673) Dictyostelium discoideum vegetative cDNA clone:VS...    50   1e-06  2
(BJ392599) Dictyostelium discoideum cDNA clone:dds28c08, 5' ...    50   1e-06  2
(BJ404353) Dictyostelium discoideum cDNA clone:dds28c08, 3' ...    50   1e-06  2

Homology Contig-U13988-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC116551_32(AC116551|pid:none) Dictyostelium discoideum chromoso...   333   e-123
BX295539_16(BX295539|pid:none) Neurospora crassa genomic DNA, BA...    35   5.9