Dictyostelium discoideum cDNA Contig-U13986-1

Assembled

Chromosomal Location of Contig-U13986-1

Sequence Contig-U13986-1

ACTGTTGGCC TACTGGAATT TAATACAGCA TATAATTCAT TCATACATTT
AATCAAACAA TGAATTCTAC TCGTAATATC ATTTCATTAG TTCGTCGTTA
TTCAACTTCA AGAAGTGTTA AAATCGCTTC ACATGGTTCA CCATCAACTG
CTTTAAAGAT TGAAAATGAA AATATTACAG ATAAAATTTC AAATAAAGAT
GTTTTAGTTG AAATGTTACA TGCACCAATT AATCCAGCAG ATTTAAATAT
TATTCAAGGT ACTTATGGTA CAAATGTTCA AGTTGGAGGT GTAGCAGGTA
TGGAAGGTGT TGGTGTTGTT AAAAAGGTTG GTAGTGGTGT TACAGGATTA
AAAGAGAATG ATTTAGTAGT ACCATCAATG AAACAACACT TTGGATCATG
GAGAAGTAAA GGTGTTTGGA GTGAACAACA ATTATTTAAA GTACCATCAG
ACATTCCAAC CGAATACTTA TCCACCATTT CAATCAATCC AACCACTGCC
TATTTGTTAT TGAACGATTT CGTAAAGTTA CAACAAGGCG ATGTCATCAT
TCAAAACGCA TCCAACTCAA TGGTTGGTTT GTCAGTCATT CAATTGGCAA
AGGCACGTGG TATCAAAACC ATCAATGTCA TTCGTGACGG TTCAGAATTC
GAAGACAACG TCCAACGTCT CAAGCAGTTG GGTGGCGACA TCGTCGTCTC
TGAAGAGTAC GTTCGTACAC CAGCATTCAG AAAATTAATC TCTGATTTAC
CATCACCAAA ATTGGCATTA AACGCCGTCG GTGGTCAATC CGCCACCGAG
TTATCAAGAA TCCTCGCTGA CAATGGTACC TTGGTCACTT ATGGTGGTAT
GTCTCGTGAA CCAGTCACCA TTCCAACCTC TCAATTGATC TTCCGTAACA
TTCAAATTCG TGGTTTTTGG TTAAATAAAT GGTTTGAACA ACATACTGAC
TCTGAAAAAC AATCTGTCTA TGATGCTATC TTTGATACTT ATCCGTAAGA
AACAATTTAA ACTTTTAATT GAAAAACATA AATTCTCTGA ATTTGCATCA
AGCTTTATTA AAATCACAAC AATCTGGTCA TGGTAGAAAA ATTGTTTTAG
ATTTACAATT GTAATAAAAA AAAAAAAAAA ATAATAATAA TAATATAAAA
TCAAGAAAGA AATAATATAT AATATATATA ATTATCACTC TTTTTTTTAT
TTCTACTTAG GTTGTAAAAA ATATAAATAA GGAATTTTGA AAGAGTGTGT
AATTAATTTA AAAAAAAAAA TAAAAATAAA AATAAAAAAA ATAAAAATAA
AAAT

Translated Amino Acid Sequence Contig-U13986-1

cwptgi*ysi*FIHTFNQTMNSTRNIISLVRRYSTSRSVKIASHGSPSTALKIENENITD
KISNKDVLVEMLHAPINPADLNIIQGTYGTNVQVGGVAGMEGVGVVKKVGSGVTGLKEND
LVVPSMKQHFGSWRSKGVWSEQQLFKVPSDIPTEYLSTISINPTTAYLLLNDFVKLQQGD
VIIQNASNSMVGLSVIQLAKARGIKTINVIRDGSEFEDNVQRLKQLGGDIVVSEEYVRTP
AFRKLISDLPSPKLALNAVGGQSATELSRILADNGTLVTYGGMSREPVTIPTSQLIFRNI
QIRGFWLNKWFEQHTDSEKQSVYDAIFDTYP*eti*tfn*kt*il*icikly*nhnnlvm
veklf*iyncnkkkkkiiiii*nqernni*yi*lslfflfllrl*ki*irnfervcn*fk
kknknknkknknkn

Homology Contig-U13986-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13986-1 (Contig-U13986-1Q) /CSM_Contig/Conti...  2210  0.0
Contig-U12889-1 (Contig-U12889-1Q) /CSM_Contig/Conti...    48  2e-05
Contig-U13875-1 (Contig-U13875-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U10300-1 (Contig-U10300-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U13537-1 (Contig-U13537-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U10320-1 (Contig-U10320-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U13893-1 (Contig-U13893-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U11170-1 (Contig-U11170-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U10840-1 (Contig-U10840-1Q) /CSM_Contig/Conti...    42  0.001
Contig-U12778-1 (Contig-U12778-1Q) /CSM_Contig/Conti...    40  0.006

Homology Contig-U13986-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ424592) Dictyostelium discoideum cDNA clone:ddv52o19, 5' ...  1344   0.0    1
(BJ328882) Dictyostelium discoideum cDNA clone:dda29o20, 5' ...  1263   0.0    1
(BJ428576) Dictyostelium discoideum cDNA clone:ddv12p11, 3' ...  1243   0.0    4
(BJ417763) Dictyostelium discoideum cDNA clone:ddv28o16, 5' ...  1235   0.0    1
(BJ410420) Dictyostelium discoideum cDNA clone:ddv12p11, 5' ...  1235   0.0    1
(BJ414149) Dictyostelium discoideum cDNA clone:ddv18p06, 5' ...  1231   0.0    1
(BJ412697) Dictyostelium discoideum cDNA clone:ddv9d16, 5' e...  1221   0.0    1
(BJ432275) Dictyostelium discoideum cDNA clone:ddv18p06, 3' ...  1215   0.0    4
(BJ431002) Dictyostelium discoideum cDNA clone:ddv9d16, 3' e...  1211   0.0    4
(BJ410732) Dictyostelium discoideum cDNA clone:ddv1k16, 5' e...  1211   0.0    2

Homology Contig-U13986-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q9Z311) RecName: Full=Trans-2-enoyl-CoA reductase, mitochondria...   246   2e-63
CR761275_1(CR761275|pid:none) Xenopus tropicalis finished cDNA, ...   245   3e-63
AF151821_1(AF151821|pid:none) Homo sapiens CGI-63 protein mRNA, ...   238   3e-61
CR456703_1(CR456703|pid:none) Homo sapiens full open reading fra...   238   5e-61
AL590729_2(AL590729|pid:none) Human DNA sequence from clone RP11...   237   6e-61
BT047630_1(BT047630|pid:none) Salmo salar clone ssal-evf-523-019...   232   2e-59
AC135230_7(AC135230|pid:none) Medicago truncatula clone mth2-23e...   205   3e-51
AP008218_5(AP008218|pid:none) Oryza sativa (japonica cultivar-gr...   204   7e-51
(Q9V6U9) RecName: Full=Probable trans-2-enoyl-CoA reductase, mit...   204   7e-51
AY062554_1(AY062554|pid:none) Arabidopsis thaliana oxidoreductas...   202   2e-50