Dictyostelium discoideum cDNA Contig-U13962-1

Assembled

Chromosomal Location of Contig-U13962-1

Sequence Contig-U13962-1

CACTGTTGGC CTACTGGTTT AAACGTTGTC TTCAGAGATC TAAAAAATAA
AAAAAAAGAA ATAATAATTG GTTTCTAAGA AAGAAAAAAA AAAGATATAA
TAGTAATAAT AATAATTTTT TTCTTTTTTT TTACGACATA AAATTAATCA
ATATTTACTT CTCCAATAAA AAAAAAAAAT AAAAAAAAAA ACAACAAAAA
AAAAAAAATA AAAAAATAAA AAAATAATTC AAAAACACCA CTAAATACAT
TCACGTATAT ACGTATATAT ATAATATTTA TAAAAAACAA CAAACAAATC
ATAAATACAC ACACACAAAC ACACACAGAT ATCATATAAA TATAAAATGA
AGCGTATACA TTTTGTGTTT GTTATACTTG GTTTACTTTG GATATCTGGT
ATTGCACTTT ATATGTCAAG TCGTCAAAAA GTTGAACAAA GTATTCAAGA
GGAGCAAACT AAACCAATAC AAGGTACAAG AACAGATAAA AAGAAATTAC
ATTGCGACTA CATTGATATG GTTTATACAT GGGTAAATGG TTCCGATCCA
AAACATATTG ATTCAAGAAC AATGAGATCA GGTAATACAA GACATTCATC
ACCAGGTAAT AATAGATATA GAGATTTAAT GGGTTTAAAA TATTCATTAA
GAAGTATTAA AAAATTTGCA CCATGGATTA AAAATGTTTG GGTTGTTTCA
GCTTCACAAT ATCCAACTTG GTTCGATCCA TCTTCTGATG AAGTTAAATT
CATTTTCCAT GAAGATTATT ATTCAAATCA AGATGATTTA CCAACATTTA
ATTCAAATTC AATTGAAAGT AATTTTTATT CATTACCAAA AGAAGTTTCA
GATTGTTTTA TTTATTTTAA TGATGATATT TTCTTTGGAG CACCAGTGTC
GGTGTCAGAT TTTTGGGATT CAGATGCAGG TCAAGCAATT TATAAGAGTA
GTTGGACAGC ACCACAAAGT AAAGAGAAAC AATCGAATAT CTGGCATGCA
TGTATTGCCT ATACCAATGA TTTATTGAAC AATATTTGGG AGGTTGATAA
TAAGAATCGT CATTATGCAT CACATGGTCA TCAATTCTTT ACTCGTGAGA
TCTTTGATCG TATGTATCAA GATTTGGAAC CAGAGTTTAA GAAAACCTCT
GCCAATCCAT TCCGTACAGC TCACGACCTT CAAATTCCTT TCCTTTATTT
GGCTTATGTA ACTCGTTTCT ATGCTACTTA TGAACCAACT CCAATCAATT
ATTACGCTTT GATCATGGAT GATCACGAGA AAATGAAAAA AGAATTTGCA
AAGATTTTAG CAAAGAAACC AAAGACTGTT TGTTTAAATG ATGGTCTCTC
TCCTGATAAA CCAAATACTA AGGTCGTTGA TGAATTAGAG AAATTCTTTG
AAACTTATCT TCCAGAACGT GGTTCATGGG AAAAATCAAA TTAATTAATA
CTACTCTCTC ATCTCTCACT CAATAACACT CAAATTATTT AAATATTTAA
TAATTATTAT TATTAAAAAA AAAACAAAAA AAAAAAACAA AAAAAAAAAG
AATAAAACAA AAAAAAACAG TGTTTGGTAG TAATATTATT ATTATTTATT
AATATATACA ACCTTTGACA GTAATATTAA AAGGTAAAAT TAAAAAAAAA
AAAAAAAAAA AAAAAAA

Translated Amino Acid Sequence Contig-U13962-1

tvgllv*tlssei*kikkkk**lvskkekkki******ffsfflrhkinqylllq*kkki
kkkttkkkk*knkkiiqkhh*ihsriyvyi*yl*kttnks*IHTHKHTQISYKYKMKRIH
FVFVILGLLWISGIALYMSSRQKVEQSIQEEQTKPIQGTRTDKKKLHCDYIDMVYTWVNG
SDPKHIDSRTMRSGNTRHSSPGNNRYRDLMGLKYSLRSIKKFAPWIKNVWVVSASQYPTW
FDPSSDEVKFIFHEDYYSNQDDLPTFNSNSIESNFYSLPKEVSDCFIYFNDDIFFGAPVS
VSDFWDSDAGQAIYKSSWTAPQSKEKQSNIWHACIAYTNDLLNNIWEVDNKNRHYASHGH
QFFTREIFDRMYQDLEPEFKKTSANPFRTAHDLQIPFLYLAYVTRFYATYEPTPINYYAL
IMDDHEKMKKEFAKILAKKPKTVCLNDGLSPDKPNTKVVDELEKFFETYLPERGSWEKSN
*lillshlslnntqii*ifnnyyy*kknkkkkqkkke*nkkkqclvvilllfiniynl*q
*y*kvklkkkkkkkk

Homology Contig-U13962-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13962-1 (Contig-U13962-1Q) /CSM_Contig/Conti...  2353  0.0
Contig-U09777-1 (Contig-U09777-1Q) /CSM_Contig/Conti...    64  5e-10
Contig-U12378-1 (Contig-U12378-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U09721-1 (Contig-U09721-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U02834-1 (Contig-U02834-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U14292-1 (Contig-U14292-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11475-1 (Contig-U11475-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11262-1 (Contig-U11262-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U10317-1 (Contig-U10317-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U09410-1 (Contig-U09410-1Q) /CSM_Contig/Conti...    42  0.002

Homology Contig-U13962-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ372199) Dictyostelium discoideum cDNA clone:ddc11k17, 3' ...  1439   0.0    1
(BJ344875) Dictyostelium discoideum cDNA clone:dda20e22, 3' ...  1259   0.0    3
(C84819) Dictyostelium discoideum slug cDNA, clone SSG232.       1084   0.0    1
(BJ387136) Dictyostelium discoideum cDNA clone:dds12c14, 5' ...  1003   0.0    2
(BJ327534) Dictyostelium discoideum cDNA clone:dda20e22, 5' ...   967   0.0    3
(BJ358853) Dictyostelium discoideum cDNA clone:ddc11k17, 5' ...   983   0.0    2
(BJ413100) Dictyostelium discoideum cDNA clone:ddv14n01, 5' ...   948   0.0    2
(BJ364109) Dictyostelium discoideum cDNA clone:ddc30a01, 5' ...   858   0.0    1
(C89907) Dictyostelium discoideum slug cDNA, clone SSG609.        466   e-140  3
(GR583078) CCAA1343.g1 CCAA Dictyostelium purpureum 0 hr sta...   202   e-116  4

Homology Contig-U13962-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q9L1I4) RecName: Full=Exopolysaccharide phosphotransferase SCO2...   131   8e-29
(O69853) RecName: Full=Exopolysaccharide phosphotransferase SCO6...   130   1e-28
(Q50025) RecName: Full=Exopolysaccharide phosphotransferase cpsY...   129   3e-28
(O06628) RecName: Full=Exopolysaccharide phosphotransferase cpsY...   126   3e-27
(Q9L1I2) RecName: Full=Exopolysaccharide phosphotransferase SCO2...   125   5e-27
CP001341_693(CP001341|pid:none) Arthrobacter chlorophenolicus A6...   124   1e-26
(Q714U9) RecName: Full=Capsular polysaccharide phosphotransferas...   123   2e-26
AP009493_1480(AP009493|pid:none) Streptomyces griseus subsp. gri...   122   5e-26
AE013599_836(AE013599|pid:none) Drosophila melanogaster chromoso...   119   3e-25
CP000454_560(CP000454|pid:none) Arthrobacter sp. FB24, complete ...   119   4e-25