Homology Contig-U13938-1 vs Protein

Query= Contig-U13938-1 (Contig-U13938-1Q) /CSM_Contig/Contig-U13938-1Q.Seq.d
         (1111 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116979_68(AC116979|pid:none) Dictyostelium discoideum chromoso...   492   e-138
FM204883_927(FM204883|pid:none) Streptococcus equi subsp. equi 4...    37   1.3
FM204884_1121(FM204884|pid:none) Streptococcus equi subsp. zooep...    35   4.8

>AC116979_68(AC116979|pid:none) Dictyostelium discoideum chromosome 2
            map 6445720-6776760 strain AX4, complete sequence.
          Length = 339

 Score =  492 bits (1267), Expect = e-138
 Identities = 268/339 (79%), Positives = 268/339 (79%)
 Frame = +1

Query: 43   MEKFQRELTDQAIKKIVSTLRSILYRIETKDCKDVVGLLEPYMDEESYQNIRETFLRYQE 222
            MEKFQRELTDQAIKKIVSTLRSILYRIETKDCKDVVGLLEPYMDEESYQNIRETFLRYQE
Sbjct: 1    MEKFQRELTDQAIKKIVSTLRSILYRIETKDCKDVVGLLEPYMDEESYQNIRETFLRYQE 60

Query: 223  KHRLNEFAXXXXXXXXXXXXXXXXXXXXXXXXXXTTSTTNKCGVNGIENISNKYLLQIQD 402
            KHRLNEFA                          TTSTTNKCGVNGIENISNKYLLQIQD
Sbjct: 61   KHRLNEFADDEEDILEDEEEDEDEDNINKNIDDNTTSTTNKCGVNGIENISNKYLLQIQD 120

Query: 403  VAARLVXXXXXXXXXXXXXXXXXXXXXXRYNRIADXXXXXXXXXXXXXXXXXXXXXXXTR 582
            VAARLV                      RYNRIAD                       TR
Sbjct: 121  VAARLVSSSTASASTSNGSGSNGESGTTRYNRIADRQSRENSSQSSNGGGGGGSGENGTR 180

Query: 583  KKRRGASKGFPLNWGLIMSMASNITLDQVQSMLNVLIMVLSRTPINVLFKQFHEYKFIIS 762
            KKRRGASKGFPLNWGLIMSMASNITLDQVQSMLNVLIMVLSRTPINVLFKQFHEYKFIIS
Sbjct: 181  KKRRGASKGFPLNWGLIMSMASNITLDQVQSMLNVLIMVLSRTPINVLFKQFHEYKFIIS 240

Query: 763  SVFDLLNAILRGDIKDIGTCLIIAVIGVIRFSQRKNLTLITTLEVAKYLYNSGNKKKFGL 942
            SVFDLLNAILRGDIKDIGTCLIIAVIGVIRFSQRKNLTLITTLEVAKYLYNSGNKKKFGL
Sbjct: 241  SVFDLLNAILRGDIKDIGTCLIIAVIGVIRFSQRKNLTLITTLEVAKYLYNSGNKKKFGL 300

Query: 943  IRSVSLVAFLSNLFKLVNPPPVTPLDVIQLVKSQIQSRL 1059
            IRSVSLVAFLSNLFKLVNPPPVTPLDVIQLVKSQIQSRL
Sbjct: 301  IRSVSLVAFLSNLFKLVNPPPVTPLDVIQLVKSQIQSRL 339

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,274,248,002
Number of extensions: 20393894
Number of successful extensions: 56565
Number of sequences better than 10.0: 3
Number of HSP's gapped: 56483
Number of HSP's successfully gapped: 3
Length of query: 370
Length of database: 1,051,180,864
Length adjustment: 130
Effective length of query: 240
Effective length of database: 630,428,194
Effective search space: 151302766560
Effective search space used: 151302766560
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)