Homology Contig-U13938-1 vs DNA
Query= Contig-U13938-1 (Contig-U13938-1Q) /CSM_Contig/Contig-U13938-1Q.Seq.d
(1111 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(C92809) Dictyostelium discoideum slug cDNA, clone SSF371. 993 0.0 2
(BJ348938) Dictyostelium discoideum cDNA clone:dda34h23, 3' ... 993 0.0 2
(BJ347359) Dictyostelium discoideum cDNA clone:dda26j21, 3' ... 993 0.0 2
(BJ402110) Dictyostelium discoideum cDNA clone:dds20d13, 3' ... 922 0.0 2
(BJ343645) Dictyostelium discoideum cDNA clone:dda16a21, 3' ... 803 0.0 2
(AU038065) Dictyostelium discoideum slug cDNA, clone SSH222. 993 0.0 2
(C94248) Dictyostelium discoideum slug cDNA, clone SSK591. 486 0.0 3
(BJ402307) Dictyostelium discoideum cDNA clone:dds16a09, 3' ... 757 0.0 2
(BJ331321) Dictyostelium discoideum cDNA clone:dda34h23, 5' ... 486 0.0 2
(BJ329957) Dictyostelium discoideum cDNA clone:dda26j21, 5' ... 430 0.0 3
(AU275243) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 672 0.0 1
(BJ402111) Dictyostelium discoideum cDNA clone:dds20d14, 3' ... 500 e-175 3
(AU275242) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 323 9e-84 1
(AU072905) Dictyostelium discoideum slug cDNA, clone SSF371. 311 3e-80 1
(GR575620) CBXW1038.g1 CBXW Dictyostelium purpureum 6 hr veg... 94 2e-72 5
(AU269187) Dictyostelium discoideum vegetative cDNA clone:VS... 252 3e-62 1
(GR575619) CBXW1038.b1 CBXW Dictyostelium purpureum 6 hr veg... 94 2e-49 5
(AU269188) Dictyostelium discoideum vegetative cDNA clone:VS... 119 3e-40 2
(AF131221) Dictyostelium discoideum p21-activated protein ki... 42 0.039 3
(AC169889) Macaca mulatta clone CH250-281B1, WORKING DRAFT S... 48 0.12 2
(AL772362) Zebrafish DNA sequence from clone CH211-173K16 in... 50 0.19 1
(AJ278115) Heliocidaris erythrogramma mRNA for msp130 protein. 50 0.19 1
(AC162782) Danio rerio clone CH211-87J11, WORKING DRAFT SEQU... 50 0.19 1
(DC884674) Citrus unshiu mRNA, clone: ANT2_1087, 5'-end sequ... 50 0.19 1
(CF507983) USDA-FP_123000-484 Immature Ovaries from field-co... 50 0.19 1
(AB361004) Culicoides arakawae mitochondrial DNA, complete g... 38 0.21 4
(AM477384) Vitis vinifera, whole genome shotgun sequence, co... 34 0.46 2
(AM481581) Vitis vinifera, whole genome shotgun sequence, co... 34 0.47 2
(AM435810) Vitis vinifera contig VV78X102469.31, whole genom... 34 0.50 2
(DQ832717) Phytophthora sojae mitochondrion, complete genome. 36 0.70 5
(AC158778) Mus musculus chromosome 19, clone RP24-90P13, com... 40 0.71 3
(AC133734) Rattus norvegicus clone CH230-467P12, WORKING DRA... 40 0.72 5
(BX649550) Zebrafish DNA sequence from clone CH211-120K2 in ... 48 0.77 1
(AC224178) Bos taurus clone CH240-447D12, WORKING DRAFT SEQU... 48 0.77 1
(AC218757) Bos taurus clone CH240-294L6, WORKING DRAFT SEQUE... 48 0.77 1
(FH098194) CHO_OF3031xo24r1.ab1 CHO_OF3 Nicotiana tabacum ge... 48 0.77 1
(ET430795) MUGQ_CH252P429B09Sp6_CP821_047 CHORI-252 Vervet M... 48 0.77 1
(ET216425) MUGQ_CH252P420K09T7_CP804_037 CHORI-252 Vervet Mo... 48 0.77 1
(EJ863680) 1093018234542 Global-Ocean-Sampling_GS-30-02-01-1... 40 0.83 2
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 36 1.1 2
(AC008357) Drosophila melanogaster, chromosome 3R, region 86... 36 1.6 2
(AC007770) Drosophila melanogaster, chromosome 3R, region 86... 36 1.6 2
(CT573504) Medicago truncatula chromosome 5 clone mth2-178o1... 36 1.6 2
(AM468626) Vitis vinifera contig VV78X207150.8, whole genome... 36 1.6 4
(AC018294) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 36 1.6 2
(AL053670) Drosophila melanogaster genome survey sequence T7... 36 2.0 2
(AL065067) Drosophila melanogaster genome survey sequence TE... 36 2.0 2
(AL060792) Drosophila melanogaster genome survey sequence TE... 36 2.0 2
(BI271294) NF057B10FL1F1089 Developing flower Medicago trunc... 36 2.1 2
(CX528553) s13dNF55F04AT043_517618 Aphid-Infected Shoots Med... 36 2.1 2
(CX521244) s13dNF69F05VI044_450274 Virus-Infected Leaves Med... 36 2.1 2
(AG969174) Drosophila simulans DNA, clone: DSM1-006O08.F.fa,... 36 2.1 2
(BI264126) NF113C08PL1F1066 Phosphate starved leaf Medicago ... 36 2.1 2
(BE240548) EST404597 MHRP- Medicago truncatula cDNA clone pM... 36 2.2 2
(AL384431) Medicago truncatula EST MtBC22A08R1 : T7 end of c... 36 2.2 2
(AM464897) Vitis vinifera contig VV78X181337.4, whole genome... 40 2.4 4
(CD759933) AGENCOURT_14620068 NCI_CGAP_ZKid1 Danio rerio cDN... 40 2.9 2
(U51923) Dictyostelium discoideum STE20-telated kinase DPAK1... 42 3.0 2
(CR847533) Zebrafish DNA sequence from clone DKEY-15G24 in l... 46 3.0 1
(AL929289) Zebrafish DNA sequence from clone CH211-107O18. 46 3.0 1
(AC115844) Mus musculus chromosome 15, clone RP24-240I3, com... 46 3.0 1
(AC113323) Mus musculus chromosome 15, clone RP23-451O9, com... 46 3.0 1
(AC215735) Populus trichocarpa clone POP064-J20, complete se... 46 3.0 1
(AC163111) Bos taurus clone CH240-239G8, WORKING DRAFT SEQUE... 46 3.0 1
(AC173251) Bos taurus clone CH240-411M5, WORKING DRAFT SEQUE... 46 3.0 1
(CC509103) CH240_351D19.TARBAC13P2 CHORI-240 Bos taurus geno... 46 3.0 1
(EE657856) CHES7188.b1_G22.ab1 CHE(LMS) serpentine sunflower... 46 3.0 1
(EE655776) CHES5461.b1_I21.ab1 CHE(LMS) serpentine sunflower... 46 3.0 1
(CK855263) SWWbL3CAW37D11SK Wuchereria bancrofti L3 cDNA (SA... 46 3.0 1
(CK726166) SWWbL3CAW10C02SK Wuchereria bancrofti L3 cDNA (SA... 46 3.0 1
(BP615441) Arabidopsis thaliana cDNA clone:RAFL16-15-I16, 3'... 46 3.0 1
(AA841696) MB3D6V6B02T3 Brugia malayi day 6 post-infection t... 46 3.0 1
(AA841258) MB3D6AA5E10T3 Brugia malayi day 6 post-infection ... 46 3.0 1
(AA841129) MB3D6AA4A02T3 Brugia malayi day 6 post-infection ... 46 3.0 1
(AA841127) MB3D6AA3H12T3 Brugia malayi day 6 post-infection ... 46 3.0 1
(AA661340) MB3D6V5H01T3 Brugia malayi day 6 post-infection t... 46 3.0 1
(AC154417) Mus musculus BAC clone RP23-169H21 from 13, compl... 40 3.2 4
(AC182651) Populus trichocarpa clone Pop1-118I23, complete s... 36 4.0 4
(CJ359988) Molgula tectiformis cDNA, cleaving embryo clone:m... 36 4.2 3
(DX560235) GH_MBb0077A07r GH_MBb Gossypium hirsutum genomic ... 36 4.5 2
(AC016441) Homo sapiens clone RP11-30I3, WORKING DRAFT SEQUE... 32 5.8 2
(AC026357) Homo sapiens 12 BAC RP11-855O3 (Roswell Park Canc... 32 5.9 2
(BM179491) dai44c11.x1 NICHD_XGC_Sp1 Xenopus laevis cDNA clo... 40 6.8 2
(FE803206) CCAG24885.g1 CCAG Petrolisthes cinctipes heart, g... 38 6.8 2
(FE754147) CAYF3507.b3 CAYF Petrolisthes cinctipes heart, wh... 38 7.5 2
(EJ344520) 1092963538053 Global-Ocean-Sampling_GS-28-01-01-1... 34 7.6 2
(AC158409) Ovis aries clone CH243-382N2, WORKING DRAFT SEQUE... 44 7.8 2
(AM483851) Vitis vinifera contig VV78X098531.11, whole genom... 42 8.2 3
(CU207299) Zebrafish DNA sequence from clone CH73-332J10 in ... 34 8.6 6
(FE834127) CCAG45062.g1 CCAG Petrolisthes cinctipes heart, g... 38 8.7 2
(AC114114) Rattus norvegicus clone CH230-122K4, *** SEQUENCI... 36 8.7 5
(EU100742) Cordyceps bassiana isolate Bb147 mitochondrion, c... 32 8.9 5
(AC167790) Bos taurus clone CH240-214G15, WORKING DRAFT SEQU... 38 9.1 4
(CQ870464) Sequence 885 from Patent WO2004074320. 44 9.2 4
(FE777691) CCAG941.g1 CCAG Petrolisthes cinctipes heart, gil... 38 9.3 2
(FE823914) CCAG37650.g1 CCAG Petrolisthes cinctipes heart, g... 38 9.3 2
(FE779347) CCAG10711.g1 CCAG Petrolisthes cinctipes heart, g... 38 9.6 2
(FE775539) CCAG8287.g1 CCAG Petrolisthes cinctipes heart, gi... 38 9.7 2
(FE785857) CCAG14619.g1 CCAG Petrolisthes cinctipes heart, g... 38 9.8 2
(FE766898) CCAG3494.g1 CCAG Petrolisthes cinctipes heart, gi... 38 10.0 2
>(C92809) Dictyostelium discoideum slug cDNA, clone SSF371.
Length = 683
Score = 993 bits (501), Expect(2) = 0.0
Identities = 501/501 (100%)
Strand = Plus / Plus
Query: 569 agaatggcacacgtaaaaagagaagaggtgcttcaaagggattcccattgaattggggtc 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 agaatggcacacgtaaaaagagaagaggtgcttcaaagggattcccattgaattggggtc 208
Query: 629 tcatcatgtcaatggcctcaaatatcacactcgatcaagttcaatcaatgctcaatgtac 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tcatcatgtcaatggcctcaaatatcacactcgatcaagttcaatcaatgctcaatgtac 268
Query: 689 tcattatggttttatctcgtactccaatcaacgtactcttcaaacaattccatgaatata 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcattatggttttatctcgtactccaatcaacgtactcttcaaacaattccatgaatata 328
Query: 749 aattcatcatctcctctgttttcgatcttttaaatgcaatacttcgtggtgatatcaaag 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 aattcatcatctcctctgttttcgatcttttaaatgcaatacttcgtggtgatatcaaag 388
Query: 809 atattggcacttgtctcatcattgctgtcattggtgtcattcgtttctctcaacgtaaaa 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atattggcacttgtctcatcattgctgtcattggtgtcattcgtttctctcaacgtaaaa 448
Query: 869 atttaactttaattacaactttggaagttgcaaaatatctttacaattctggtaacaaaa 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 atttaactttaattacaactttggaagttgcaaaatatctttacaattctggtaacaaaa 508
Query: 929 agaagtttggtttaatcagatctgtttcattggttgctttcctttccaaccttttcaaac 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 agaagtttggtttaatcagatctgtttcattggttgctttcctttccaaccttttcaaac 568
Query: 989 ttgtaaatccaccaccagtaactccattagatgttatacaattagttaaatcccaaattc 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttgtaaatccaccaccagtaactccattagatgttatacaattagttaaatcccaaattc 628
Query: 1049 aatcaagattataaatccttc 1069
|||||||||||||||||||||
Sbjct: 629 aatcaagattataaatccttc 649
Score = 242 bits (122), Expect(2) = 0.0
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 421 tcatcatcaactgcatcagcatcaacttcaaatggtagtggttccaatggtgaaagtggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcatcatcaactgcatcagcatcaacttcaaatggtagtggttccaatggtgaaagtggc 60
Query: 481 accactcgttataatagaattgcagatagacaatcacgtgaaaatagctcacaaagctca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accactcgttataatagaattgcagatagacaatcacgtgaaaatagctcacaaagctca 120
Query: 541 aa 542
||
Sbjct: 121 aa 122
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,287,610,144
Number of extensions: 80020977
Number of successful extensions: 6897291
Number of sequences better than 10.0: 102
Length of query: 1111
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1087
Effective length of database: 104,103,628,548
Effective search space: 113160644231676
Effective search space used: 113160644231676
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home