Homology Contig-U13906-1 vs DNA
Query= Contig-U13906-1 (Contig-U13906-1Q) /CSM_Contig/Contig-U13906-1Q.Seq.d
(1234 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ341887) Dictyostelium discoideum cDNA clone:dda8h15, 3' e... 1287 0.0 1
(BJ381483) Dictyostelium discoideum cDNA clone:ddc41m13, 3' ... 785 0.0 1
(BJ367176) Dictyostelium discoideum cDNA clone:ddc41m13, 5' ... 591 0.0 3
(AU261437) Dictyostelium discoideum vegetative cDNA clone:VS... 593 e-165 1
(GR580837) CBZY865.b1 CBZY Dictyostelium purpureum 18 hr sta... 62 3e-29 4
(GR580838) CBZY865.g1 CBZY Dictyostelium purpureum 18 hr sta... 52 2e-12 3
(AC141676) Apis mellifera clone CH224-55I24, WORKING DRAFT S... 56 0.003 1
(DB777784) Apis mellifera head cDNA, RIKEN full-length enric... 56 0.003 1
(DB769753) Apis mellifera head cDNA, RIKEN full-length enric... 56 0.003 1
(DB761610) Apis mellifera head cDNA, RIKEN full-length enric... 56 0.003 1
(CK630267) AM0-AE0006-131201-022-F02 AE0006 Apis mellifera c... 56 0.003 1
(CK630264) AM0-AE0006-131201-022-E05 AE0006 Apis mellifera c... 56 0.003 1
(CK630261) AM0-AE0006-131201-021-E01 AE0006 Apis mellifera c... 56 0.003 1
(CK630257) AM0-AE0006-131201-022-G03 AE0006 Apis mellifera c... 56 0.003 1
(CK630256) AM0-AE0006-131201-021-H10 AE0006 Apis mellifera c... 56 0.003 1
(CK630254) AM0-AE0006-131201-021-D07 AE0006 Apis mellifera c... 56 0.003 1
(CK630253) AM0-AE0006-131201-021-B07 AE0006 Apis mellifera c... 56 0.003 1
(CK630248) AM0-AE0006-131201-021-G06 AE0006 Apis mellifera c... 56 0.003 1
(CK630247) AM0-AE0006-131201-021-G07 AE0006 Apis mellifera c... 56 0.003 1
(CK630245) AM0-AE0006-131201-022-D04 AE0006 Apis mellifera c... 56 0.003 1
(CK630244) AM0-AE0006-131201-021-D08 AE0006 Apis mellifera c... 56 0.003 1
(CK630242) AM0-AE0006-131201-022-F07 AE0006 Apis mellifera c... 56 0.003 1
(CK630241) AM0-AE0006-131201-021-H08 AE0006 Apis mellifera c... 56 0.003 1
(CK630240) AM0-AE0006-131201-021-G10 AE0006 Apis mellifera c... 56 0.003 1
(CK630238) AM0-AE0006-131201-022-A12 AE0006 Apis mellifera c... 56 0.003 1
(CK630235) AM0-AE0006-131201-022-A04 AE0006 Apis mellifera c... 56 0.003 1
(CK630234) AM0-AE0006-131201-022-B04 AE0006 Apis mellifera c... 56 0.003 1
(CK630233) AM0-AE0006-131201-022-C03 AE0006 Apis mellifera c... 56 0.003 1
(CK630225) AM0-AE0006-131201-022-E06 AE0006 Apis mellifera c... 56 0.003 1
(CK630220) AM0-AE0006-131201-022-H11 AE0006 Apis mellifera c... 56 0.003 1
(CK630219) AM0-AE0006-131201-021-D04 AE0006 Apis mellifera c... 56 0.003 1
(CK630214) AM0-AE0006-131201-022-G06 AE0006 Apis mellifera c... 56 0.003 1
(CK630213) AM0-AE0006-131201-021-G03 AE0006 Apis mellifera c... 56 0.003 1
(CK630209) AM0-AE0006-131201-021-B10 AE0006 Apis mellifera c... 56 0.003 1
(CK630203) AM0-AE0006-131201-021-G02 AE0006 Apis mellifera c... 56 0.003 1
(CK630202) AM0-AE0006-131201-022-B12 AE0006 Apis mellifera c... 56 0.003 1
(CK630200) AM0-AE0006-131201-022-G02 AE0006 Apis mellifera c... 56 0.003 1
(CK630196) AM0-AE0006-131201-021-F03 AE0006 Apis mellifera c... 56 0.003 1
(CK630194) AM0-AE0006-131201-021-C10 AE0006 Apis mellifera c... 56 0.003 1
(CK630192) AM0-AE0006-131201-022-E12 AE0006 Apis mellifera c... 56 0.003 1
(BI512087) BB160008A10F04.5 Bee Brain Normalized Library, BB... 56 0.003 1
(CK630188) AM0-AE0006-131201-021-H09 AE0006 Apis mellifera c... 54 0.014 1
(CK630269) AM0-AE0006-131201-022-B08 AE0006 Apis mellifera c... 52 0.055 1
(CK630205) AM0-AE0006-131201-021-B02 AE0006 Apis mellifera c... 52 0.055 1
(DY895203) CeleSEQ14977 Cunninghamella elegans pBluescript (... 50 0.22 1
(DY894982) CeleSEQ14687 Cunninghamella elegans pBluescript (... 50 0.22 1
(DY892400) CeleSEQ10620 Cunninghamella elegans pBluescript (... 50 0.22 1
(DY889104) CeleSEQ6629 Cunninghamella elegans pBluescript (E... 50 0.22 1
(AC006617) Caenorhabditis elegans cosmid C39B5, complete seq... 48 0.85 1
(AC006787) Caenorhabditis elegans clone Y48G9, *** SEQUENCIN... 48 0.85 1
(CK630250) AM0-AE0006-131201-021-F10 AE0006 Apis mellifera c... 48 0.85 1
(CK630237) AM0-AE0006-131201-021-E08 AE0006 Apis mellifera c... 48 0.85 1
(CK630236) AM0-AE0006-131201-021-H12 AE0006 Apis mellifera c... 48 0.85 1
(CK630229) AM0-AE0006-131201-021-C02 AE0006 Apis mellifera c... 48 0.85 1
(CK630228) AM0-AE0006-131201-021-F05 AE0006 Apis mellifera c... 48 0.85 1
(CK630204) AM0-AE0006-131201-022-H02 AE0006 Apis mellifera c... 48 0.85 1
(CK630198) AM0-AE0006-131201-022-G09 AE0006 Apis mellifera c... 48 0.85 1
(CK630189) AM0-AE0006-131201-022-G10 AE0006 Apis mellifera c... 48 0.85 1
(CP000628) Agrobacterium radiobacter K84 chromosome 1, compl... 48 0.85 1
(AC225002) Bos taurus clone CH240-470E3, WORKING DRAFT SEQUE... 44 0.93 6
(AL662839) Mouse DNA sequence from clone RP23-472O5 on chrom... 46 3.4 1
(AC185994) Pan troglodytes BAC clone CH251-306M14 from chrom... 46 3.4 1
(AC069251) Genomic sequence for Arabidopsis thaliana BAC F2D... 46 3.4 1
(EA205032) Sequence 69347 from patent US 7214786. 46 3.4 1
(AL359513) Human DNA sequence from clone RP11-245D16 on chro... 46 3.4 1
(FP236663) Brassica rapa subsp. pekinensis clone KBrH041B18,... 46 3.4 1
(AC198505) Zea mays chromosome 10 clone CH201-227D13; ZMMBBc... 46 3.4 1
(AC169856) Macaca mulatta clone CH250-257B2, *** SEQUENCING ... 46 3.4 1
(CV008655) zfi01-1ms3-a05 Zfi01 Zamia fischeri cDNA clone zf... 46 3.4 1
(AI458067) tj64c10.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapie... 46 3.4 1
(AI452629) tj50a09.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapie... 46 3.4 1
(BQ359102) PM2-HT0624-080801-002-e12 HT0624 Homo sapiens cDN... 46 3.4 1
(BJ272600) Triticum aestivum cDNA clone:whoh12k02, 3' end, s... 46 3.4 1
(AA854461) aj67e07.s1 Soares_parathyroid_tumor_NbHPA Homo sa... 46 3.4 1
(BF438856) nab55b03.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapi... 46 3.4 1
(BF435196) nab36b10.x1 Soares_NSF_F8_9W_OT_PA_P_S1 Homo sapi... 46 3.4 1
(BE709219) RC6-HT0594-180500-011-D12 HT0594 Homo sapiens cDN... 46 3.4 1
(EY033989) CAIX686.fwd CAIX Artemisia annua leaf Artemisia a... 46 3.4 1
(CP001191) Rhizobium leguminosarum bv. trifolii WSM2304, com... 46 3.4 1
(CP001074) Rhizobium etli CIAT 652, complete genome. 46 3.4 1
(CP000133) Rhizobium etli CFN 42, complete genome. 46 3.4 1
(AM236080) Rhizobium leguminosarum bv. viciae chromosome com... 46 3.4 1
(GH605139) G1297P552RJ15.T0 C. parvum KSU-1 normalized sporo... 38 3.5 2
(AM454098) Vitis vinifera contig VV78X015479.4, whole genome... 34 4.6 3
(AC235921) Mustela putorius furo clone CH237-319H17, WORKING... 34 5.2 7
(FP102468) Brassica rapa subsp. pekinensis clone KBrH034A12,... 36 6.5 5
(BG283136) 602406789F1 NIH_MGC_91 Homo sapiens cDNA clone IM... 34 8.4 2
>(BJ341887) Dictyostelium discoideum cDNA clone:dda8h15, 3' end,
single read.
Length = 688
Score = 1287 bits (649), Expect = 0.0
Identities = 649/649 (100%)
Strand = Plus / Minus
Query: 478 gtgaaaaggtggatgaatctgcaattaaaaagaaagttaagaaagtaacttggaatgatt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gtgaaaaggtggatgaatctgcaattaaaaagaaagttaagaaagtaacttggaatgatt 629
Query: 538 tggtacgtttatcaactcatcaagttaaagtctatacaatcatgagtgaaagtagggata 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tggtacgtttatcaactcatcaagttaaagtctatacaatcatgagtgaaagtagggata 569
Query: 598 ccgattcaaataaagagattgcaagagaccaagatgctcagctaatcctattgaaatcta 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ccgattcaaataaagagattgcaagagaccaagatgctcagctaatcctattgaaatcta 509
Query: 658 ttagactctattatattgcagtttgtttagctaaatctttgaaattctctgaaactatgg 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttagactctattatattgcagtttgtttagctaaatctttgaaattctctgaaactatgg 449
Query: 718 ctgtattggatagagtacttacaaacattcaaaatgttcgtaaaaccaatactaaaaatc 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ctgtattggatagagtacttacaaacattcaaaatgttcgtaaaaccaatactaaaaatc 389
Query: 778 aacaaattcttaatgatacaaatgaattggaatcaaatataaagaaacaaagatcacaaa 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aacaaattcttaatgatacaaatgaattggaatcaaatataaagaaacaaagatcacaaa 329
Query: 838 ttcatgcaaactctttcattcaacaattgtcagagaatcaagatttaaaaaatcaaatgt 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttcatgcaaactctttcattcaacaattgtcagagaatcaagatttaaaaaatcaaatgt 269
Query: 898 cttctttatcaattggtggtattaccactgcctctggcaaatcaaatgatttaatctctg 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 cttctttatcaattggtggtattaccactgcctctggcaaatcaaatgatttaatctctg 209
Query: 958 gtttagattcattcgatacctctttcttgactgaaaagaaattggttcaattaccaccac 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gtttagattcattcgatacctctttcttgactgaaaagaaattggttcaattaccaccac 149
Query: 1018 aacttcaacctgttcaagccaaaccaatctttttcgatttagctttcaatagtgttactt 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 aacttcaacctgttcaagccaaaccaatctttttcgatttagctttcaatagtgttactt 89
Query: 1078 tcccatcattagatcaaagaaagaaaggtagttcaactggtactccttc 1126
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tcccatcattagatcaaagaaagaaaggtagttcaactggtactccttc 40
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 1,380,462,600
Number of extensions: 86763592
Number of successful extensions: 6996615
Number of sequences better than 10.0: 89
Length of query: 1234
Length of database: 106,710,029,556
Length adjustment: 24
Effective length of query: 1210
Effective length of database: 104,103,628,548
Effective search space: 125965390543080
Effective search space used: 125965390543080
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
Dictyostelium discoideum cDNA Project Home