Dictyostelium discoideum cDNA Contig-U13896-1

Assembled

Chromosomal Location of Contig-U13896-1

Sequence Contig-U13896-1

ACTGTTGGCC TACTGGTTGT TTTATAAACT TATCAAATCC CGATCATTAA
ACAAATTGTA TATATATTCA ATTTTTGATT TTCATTTTCA CCTTTTTTTT
TTTTAATAGC ATATAATAAC AATAATAATG GGAAATAATA AAAAAAAAAA
AACAAAATTT AAATCAAAAA TAAAATGAAA CCAATTAATG AAGGAATAGG
TGAAGGTGAA GTACAGCCTT TACTTAATAG TGATTATCAA TATTCTAAAC
CATCATTTAG AAATAGAAGT AAATATAATA TTATAGTTTT AGGATTAAGT
TTTTGTATTT TATTTTCAGC ATTTTCTCCA ACTCAGGAAT TACAAACTAC
AATTAATAAA AATCTCGGGT CAGATTCATT AGCAGTATTA TATGCATTTT
ATCAGTAACA AATTTTATAT CACCATTTGT AATTTTAAAA TTAGGAGAAA
GATTATCATT AATAGTTGGT ACATTAACAT ATTCAGCATA TATCGCAGCA
AATATTAAAG TTACAATACC AACATTATAT GGTGCGTCAG TTTTACTTGG
TATTGGTGGT GCTATTTTAT GGACTGCTCA AGGTTCTTTT GTAATTCAAT
GTTCAACAGA GAGTACAATT GGCGCAAATA CTGGTTTATT TTTTGCATTA
TTTCAAATTA ATCAAATTAT TGGTAATTTA GGTACAGCAG CATTGATTGA
TAAAGCAGGT TTACAAAATG AGGTTTTATT TTTAATATTT TTAGGTGTAT
CATTATTGTC GATATTGGGA TTTGCAATAT TGGGTAAACC AGTTAAAGTA
AATGATAAAG GTCAAATAGT GGAGAAAGAG AATCAAACTA TGTCAATTAG
GGATCGTTTA TTATCAACTA TAGTTTTATT TAAAGATAGA CCAATTCAAT
TATTAGTAGC ACCATTGCTT TATAGTGGTA TTAGTCAGTC ATTCTTTTTT
GGTGTATTCC CTCAATTACT TGGTAAGGAA TGGATTGGTT ATGTGATGGC
TGTATTTGGT TTTTGCGATG CTGCTGGCAG TATGATCATG GGTAAATTGT
CTGATATTTT CGGTAGAAAG ATACTTGTGG TCTTTAGTAC CGTGTTTTGT
ATTTCTGGTA CTGTTTTATG TATCCTATTG GACAGATTAG TCTCAACACA
ATCAGAGAGA ATACCATACT ATTTCATAGT TGCCGCTTTA TTAGGTTTGG
CAGATGCCGG CTTCAATACT CAATTATACG CATTAATCGG TGTTATCTAT
CCAAAGAAAG GTGAAGCTGC TGCCGGTGTT TTCAAATTCG TTCAGTCAAC
TGCAACTGCT GCTGCCTTTG TCTATGGTCC ATATGCTACA TTATTTGATA
ATGTCATTAT CGTTGGTTCT TTAGTAATTT TATCTTGTGT ATTATTCATG
TTTGCTGATA ATTTTTCAAA AAGAGTTTCA ATTGATGAGT TAACTGTTTG
AAAAAAAAAA AAAAATAGAA AAAGAAAATA ATATAGATAT AATTTAAATA
AAATTAAAAT ATTTTTTCCC CCAATAAAA

Translated Amino Acid Sequence Contig-U13896-1

cwptgcfinlsnpdh*tnciyiqflififtffffnsi**q**weiikkkkqnlnqk*net
n**rnr*r*staft***lsif*tii*k*k*i*yysfrikflyfifsifsnsgitnyn**K
SRVRFISSIICILSVTNFISPFVILKLGERLSLIVGTLTYSAYIAANIKVTIPTLYGASV
LLGIGGAILWTAQGSFVIQCSTESTIGANTGLFFALFQINQIIGNLGTAALIDKAGLQNE
VLFLIFLGVSLLSILGFAILGKPVKVNDKGQIVEKENQTMSIRDRLLSTIVLFKDRPIQL
LVAPLLYSGISQSFFFGVFPQLLGKEWIGYVMAVFGFCDAAGSMIMGKLSDIFGRKILVV
FSTVFCISGTVLCILLDRLVSTQSERIPYYFIVAALLGLADAGFNTQLYALIGVIYPKKG
EAAAGVFKFVQSTATAAAFVYGPYATLFDNVIIVGSLVILSCVLFMFADNFSKRVSIDEL
TV*kkkknrkrk*yrynlnkikiffppik

Homology Contig-U13896-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13896-1 (Contig-U13896-1Q) /CSM_Contig/Conti...  2573  0.0
Contig-U01712-1 (Contig-U01712-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U05053-1 (Contig-U05053-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U13916-1 (Contig-U13916-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U12206-1 (Contig-U12206-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U11917-1 (Contig-U11917-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U11407-1 (Contig-U11407-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U11388-1 (Contig-U11388-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U11342-1 (Contig-U11342-1Q) /CSM_Contig/Conti...    38  0.027
Contig-U11288-1 (Contig-U11288-1Q) /CSM_Contig/Conti...    38  0.027

Homology Contig-U13896-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ341412) Dictyostelium discoideum cDNA clone:dda6e16, 3' e...  1402   0.0    2
(BJ359395) Dictyostelium discoideum cDNA clone:ddc14d12, 5' ...  1310   0.0    1
(BJ372815) Dictyostelium discoideum cDNA clone:ddc14d12, 3' ...  1277   0.0    3
(BJ398311) Dictyostelium discoideum cDNA clone:dds11n24, 3' ...  1273   0.0    3
(BJ377800) Dictyostelium discoideum cDNA clone:ddc26a04, 3' ...  1181   0.0    1
(BJ344931) Dictyostelium discoideum cDNA clone:dda21d01, 3' ...  1066   0.0    2
(BJ359397) Dictyostelium discoideum cDNA clone:ddc14e08, 5' ...   846   0.0    3
(C84202) Dictyostelium discoideum slug cDNA, clone SSC487.        666   0.0    2
(AU051978) Dictyostelium discoideum slug cDNA, clone SSC838.      882   0.0    1
(AU071769) Dictyostelium discoideum slug cDNA, clone SSC487.      186   1e-81  3

Homology Contig-U13896-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AF015191_1(AF015191|pid:none) Mus musculus clone ET8 ET putative...   139   1e-34
(Q6DIT7) RecName: Full=UNC93-like protein MFSD11;  &BC075448_1(B...   137   3e-34
AE014297_1576(AE014297|pid:none) Drosophila melanogaster chromos...   148   6e-34
(Q6PB15) RecName: Full=UNC93-like protein MFSD11;  &BC059969_1(B...   136   8e-34
(O43934) RecName: Full=UNC93-like protein MFSD11; AltName: Full=...   135   2e-33
BT059009_1(BT059009|pid:none) Salmo salar clone ssal-rgf-519-237...   135   5e-33
(Q5RCQ5) RecName: Full=UNC93-like protein MFSD11;  &CR858214_1(C...   134   5e-33
BT085119_1(BT085119|pid:none) Zea mays full-length cDNA clone ZM...   125   9e-32
BT039502_1(BT039502|pid:none) Zea mays full-length cDNA clone ZM...   126   8e-31
(A2VE54) RecName: Full=Protein unc-93 homolog A;          Short=...   133   2e-29