Dictyostelium discoideum cDNA Contig-U13854-1

Assembled

Chromosomal Location of Contig-U13854-1

Sequence Contig-U13854-1

CAATTATTAT TTATAACAAA TAAATATTAT TTTTTAATTT TATTATTCAT
ATTATATAAT TTTGGATTGA TTTCAAAACT TAATAAAATC TCATTGTACA
TTAAATTTTA TAAAATAAAA TAAAAAAAAA AAAAATTAAA AAATAAAAAA
TAAAAATGGA AGAAATTAAT AAAAAAGATA CATTCATTGA ACCAATTCTC
AAAGAAAATA AAGATAGATT TGTATTATTT CCAATAAAAT ACCCAGATAT
CTGGAGAATG TATAAAAAAG CCCTTGCAAG TCATTGGGTA GCTGAAGAAA
TTGATCTTGG TAATGATAAT GTTGATTGGG AATATAAATT AACAGATAAT
GAACGTCATT TCATCTCACA TGTTTTGGCA TTTTTTGCTG CATCTGATGG
TATTGTAAAT GAAAACCTTG CAACTAGATT TATGTCTGAA GTACAAATTC
CAGAAGCAAG ATGTTTCTAT GGTTTTCAAA TTGCAATTGA AAATATACAT
TCTGAAACTT ATAGTCTTTT AATTGAAACT TATATTAAAG ATAAGCAAAC
TAAAGATAAA TTATTTAATG CAATTGAAAC AATTCCATGT ATTAAAAAGA
AGGCAGAATG GGCATTAAGA TGGATAAATG ATTCAGATTC ATTTGCAGAA
CGTTTGGTTG CATTTGCAGC AGTTGAGGGT ATATTTTTCA GTGGAAGTTT
TTGTTCAATA TTTTGGTTGA AAAAGAGAGG TTTAATGCAA GGTTTAACAT
TTTCAAATGA ATTAATTTCA CGTGACGAAG GTTTACATTG TGATTTCGCA
TGTCTTCTCT ACACAAAGTT ACAAAGAAAG TTGGATCCAA AAGTCATTGA
GAAAATGATA AGAGATGCTG TCGAATGTGA AAAGGAATTC ATTTGCGAAT
CATTACCAGT GGATTTAATT GGTATGAACT CGCGTTCAAT GTCTCAATAC
ATTGAGTTTT GTGCTGATCG TTTAGTGGTT TCTTTAGGTT ACAAAAAGAT
TTTCAACTCT TCAAATCCTT TCGAATGGAT GGAAATGATT TCTTTACAAA
GAAAATCAAA CTTTTTCGAA GGCAAAGTTG CAGAATACGC TAAAACTGGT
GTTGCAATTC AAGGAAATAA TCAACAAAAA AATAATCAAT CAAGAACTTT
AGTTTTAGAT GAAGATTTTT AAAAAAAAAC CTTTTATTTT TTTTTTTTCT
TTTTTCAGTA GTGTTTCATT TGATAGGATA TTTAAAAATT GTGTTTTGAA
AAAAAAAAAA AAAATAAAAA AAAAATAAAT AAAAAATAAA AAAAATTAAA
TAAATTAAAA AAAAAAAAA

Translated Amino Acid Sequence Contig-U13854-1

iiiynk*ilffnfiihii*fwidfkt**nlivh*il*nkikkkkikk*KIKMEEINKKDT
FIEPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHF
ISHVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKD
KQTKDKLFNAIETIPCIKKKAEWALRWINDSDSFAERLVAFAAVEGIFFSGSFCSIFWLK
KRGLMQGLTFSNELISRDEGLHCDFACLLYTKLQRKLDPKVIEKMIRDAVECEKEFICES
LPVDLIGMNSRSMSQYIEFCADRLVVSLGYKKIFNSSNPFEWMEMISLQRKSNFFEGKVA
EYAKTGVAIQGNNQQKNNQSRTLVLDEDF*kktfyffffffq*cfi**di*klcfekkkk
nkkkinkk*kklnklkkkk

Homology Contig-U13854-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13854-1 (Contig-U13854-1Q) /CSM_Contig/Conti...  1929  0.0
Contig-U03282-1 (Contig-U03282-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U08720-1 (Contig-U08720-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U14024-1 (Contig-U14024-1Q) /CSM_Contig/Conti...    36  0.093
Contig-U11994-1 (Contig-U11994-1Q) /CSM_Contig/Conti...    36  0.093
Contig-U11718-1 (Contig-U11718-1Q) /CSM_Contig/Conti...    36  0.093
Contig-U14626-1 (Contig-U14626-1Q) /CSM_Contig/Conti...    34  0.37
Contig-U14177-1 (Contig-U14177-1Q) /CSM_Contig/Conti...    34  0.37
Contig-U14165-1 (Contig-U14165-1Q) /CSM_Contig/Conti...    34  0.37
Contig-U13829-1 (Contig-U13829-1Q) /CSM_Contig/Conti...    34  0.37

Homology Contig-U13854-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(L36941) Dictyostelium discoideum ribonucleotide reductase s...  1217   0.0    4
(AU264434) Dictyostelium discoideum vegetative cDNA clone:VS...  1134   0.0    1
(BJ401610) Dictyostelium discoideum cDNA clone:dds23g22, 3' ...  1013   0.0    2
(C92707) Dictyostelium discoideum slug cDNA, clone SSF884.        829   0.0    4
(BJ432589) Dictyostelium discoideum cDNA clone:ddv19k03, 3' ...   864   0.0    4
(BJ360063) Dictyostelium discoideum cDNA clone:ddc4c06, 5' e...   805   0.0    2
(BJ403039) Dictyostelium discoideum cDNA clone:dds18i06, 3' ...   595   0.0    3
(BJ372572) Dictyostelium discoideum cDNA clone:ddc13n04, 3' ...   537   e-155  2
(BJ346283) Dictyostelium discoideum cDNA clone:dda30n12, 3' ...   502   e-151  3
(BJ340744) Dictyostelium discoideum cDNA clone:dda3k13, 3' e...   426   e-135  3

Homology Contig-U13854-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P42521) RecName: Full=Ribonucleoside-diphosphate reductase smal...   642   0.0
CP000383_447(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340...   424   e-117
CR382128_139(CR382128|pid:none) Yarrowia lipolytica strain CLIB1...   420   e-116
(Q9LSD0) RecName: Full=Ribonucleoside-diphosphate reductase smal...   420   e-116
AB040738_1(AB040738|pid:none) Lentinula edodes Le.rnrB1 mRNA for...   418   e-115
CS559656_1(CS559656|pid:none) Sequence 243 from Patent WO2006032...   417   e-115
BT034287_1(BT034287|pid:none) Zea mays full-length cDNA clone ZM...   417   e-115
EU965840_1(EU965840|pid:none) Zea mays clone 289313 ribonucleosi...   416   e-114
(P49730) RecName: Full=Ribonucleoside-diphosphate reductase smal...   415   e-114
AK073063_1(AK073063|pid:none) Oryza sativa Japonica Group cDNA c...   414   e-114