Dictyostelium discoideum cDNA Contig-U13716-1

Assembled

Chromosomal Location of Contig-U13716-1

Sequence Contig-U13716-1

ACTGTTGGCC TACTGGGAGT TACTTCGTTT TTATATAACA CGCACAATAA
TATTATTATT TAAAATAATT GTAACTGTAT TTTATTAAAA ATATAATTAT
TTCAAATAGT ATATATAAAA AACAAAGATG GCAGATGATG CAATTAGAAT
AGCAATTGTA AATGCAGATA GATGCAAACC AAAGAAATGT AGTCAAGAAT
GTAAAAAGTA TTGCCCAGTC GTAAAGATGG GTAAACTTTG TATTGAAGTT
AAACCAACAT CAAAGATGTC ATACATTTCA GAAGAACTTT GTAATGGTTG
TGGTATTTGT GTAAAGAAAT GTCCATTCGA AGCAATTCAA ATCATTAATT
TACCAAAGAA TTTAACCAAA GAAACCACAC ATCGTTATGG TCCAAACAGT
TTCAAACTTC ATAGATTACC AACACCACGT CCAGGTCAAG TATTGGGTTT
AGTAGGTACC AATGGTATTG GTAAATCCAC TGCCTTAAAG GTTTTAGCTG
GTAAATTAAA ACCAAATTTA GGTCTCTACG ATAATCCACC AACTTGGGAT
GAAATCATTT CTTTCTTCCG TGGTAATGAA CTTCAATCCT ATTTCACTAG
AATTCTCGGT GAAGATTTAA AAGCACTCAT CAAACCACAA TACGTTGATA
ATCTTTCAAA GGCTGTCACT GGTGTAGTCT CAAGTATCCT CGATGCTAAA
TCTGAAAAAG ATAATAAACA AGAAATGATC GATTGTCTTG ACTTAAAAGA
AGCACTTCAT AAAACTGTAC CAGTACTTTC AGGTGGTGAA TTACAACGTT
TTGCAATTGC TGTTGTTGCA ATTCAAAAAG CCGATGTTTA TATGTTTGAT
GAACCATCAA GTTATCTTGA TGTTAAACAA AGATTAAAGG CAGCACAAGT
TATTAGAGGT TTAATTCAAT CACAAAATTA TATTATTGTA GTTGAACATG
ATCTTAGTGT TTTAGATTAC TTATCAGATT TTATTTGTTG TCTTTATGGA
GCACCAGGTG CTTATGGTGT TGTAACATTA CCATTCTCTG TTAGAGAAGG
TATTAATATT TTCCTTAGTG GTTATATTCA CACAGAGAAT ATGAGATTCC
GTAAGGATGC ATTAACCTTT AAATTCTCAG AGACAGCAGA GAATGAAGAA
GAGATCAAGA AACATTGTAA CTACAAATAT CCAAATATGA CCAAAACAAT
GGGTACCTTC AAATTGGAAA TTAAAGCAGG TCAATTCACA GATTCTGAAA
TCATCGTTAT GTTGGGTCAA AACGGTACCC GGTAAGACCA CCTTTATCAG
AATGTTGGCT GGTCATATGC CATCCGATAC TGATGCTCAA GTTCCAGAGT
TGAATGTCAG TTACAAACCA CAAAAAATCG ATCCAAAATT CCCAGGTTCC
GTTAGAGAAT TGATTAATAA ACGTATTTGC AACACTTTCC TTCATCCACA
ATTCCAATCC GATGTCGGTT AAACCATTAA ACATTGAAAA CATCATCGAC
AATCAAGTAC TCAATTTATC TGGTGGTGAG TTACAACGTG TTGCCATCGT
TTTATGTTTA GGTCAACCTG CTGATATCTA TCTCATTGAT GAACCATCCG
CTTATTTGGA TTCTGAACAA CGTATTATCG TCTCTAAAGT CATCAAGAGA
TTCATTCTTC ACGCTGGTAA ATCTGGTTTC ATCGTAGAGC ACGATTTCAT
TATGGCCACT TATTTAGCTG ATCGTGTCAT CGTTTATGAT GGTATTCCAG
GTGTCTCTTG TGTTGCTAAT ACTCCACAAT CTCTCCTCAC TGGTATGAAC
TCTTTCCTTA AATCTCTCGA AATCACTTTC CGTCGTGATC CATCCAATTT
CCGTCCAAGA ATTAACAAAT TAAATTCAAT CAAAGATAAT GAACAAAAAG
CTGCTGGTAA TTATTTCTTC CTTGATAATG TTGATGAATA AATATTAAAT
AATTAAGATA AGATGATAAT AATGATTCAA TGGAAGAAAA AAAAAAAAAA
AAAAAAAGAA ATAATAAATA AATAAATAAA TTTAAAATTA TAACAATAAA
AAAAAAAAAA AAAAAAAAAA AA

Translated Amino Acid Sequence Contig-U13716-1

llaywellrfyitrtiillfkiivtvfy*kynyfk*yi*KTKMADDAIRIAIVNADRCKP
KKCSQECKKYCPVVKMGKLCIEVKPTSKMSYISEELCNGCGICVKKCPFEAIQIINLPKN
LTKETTHRYGPNSFKLHRLPTPRPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGLYDNPP
TWDEIISFFRGNELQSYFTRILGEDLKALIKPQYVDNLSKAVTGVVSSILDAKSEKDNKQ
EMIDCLDLKEALHKTVPVLSGGELQRFAIAVVAIQKADVYMFDEPSSYLDVKQRLKAAQV
IRGLIQSQNYIIVVEHDLSVLDYLSDFICCLYGAPGAYGVVTLPFSVREGINIFLSGYIH
TENMRFRKDALTFKFSETAENEEEIKKHCNYKYPNMTKTMGTFKLEIKAGQFTDSEIIVM
LGQNGTR*dhlyqnvgwsyairy*csssrvecqlqttknrskiprfr*rid**tylqhfp
sstipircrlnh*tlktsstikysiylvvsynvlpsfyv*vnllisislmnhpliwilnn
vlsslkssrdsfftlvnlvss*stislwpli*livssfmmvfqvslvllilhnlsslv*t
lslnlskslsvvihpisvqeltn*iqskimnkkllviisslimlmnky*iikir****fn
grkkkkkkkk**ink*i*nynnkkkkkkkk

Homology Contig-U13716-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13716-1 (Contig-U13716-1Q) /CSM_Contig/Conti...  3937  0.0
Contig-U11294-1 (Contig-U11294-1Q) /CSM_Contig/Conti...    52  2e-06
Contig-U13567-1 (Contig-U13567-1Q) /CSM_Contig/Conti...    50  1e-05
Contig-U10276-1 (Contig-U10276-1Q) /CSM_Contig/Conti...    50  1e-05
Contig-U12378-1 (Contig-U12378-1Q) /CSM_Contig/Conti...    48  4e-05
Contig-U12183-1 (Contig-U12183-1Q) /CSM_Contig/Conti...    48  4e-05
Contig-U12956-1 (Contig-U12956-1Q) /CSM_Contig/Conti...    46  2e-04
Contig-U12529-1 (Contig-U12529-1Q) /CSM_Contig/Conti...    46  2e-04
Contig-U11857-1 (Contig-U11857-1Q) /CSM_Contig/Conti...    46  2e-04
Contig-U11185-1 (Contig-U11185-1Q) /CSM_Contig/Conti...    46  2e-04

Homology Contig-U13716-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AY077634) Dictyostelium discoideum RNaseL inhibitor-like pr...  1409   0.0    1
(BJ361154) Dictyostelium discoideum cDNA clone:ddc9n05, 5' e...  1215   0.0    1
(BJ360903) Dictyostelium discoideum cDNA clone:ddc8a14, 5' e...  1185   0.0    1
(BJ425893) Dictyostelium discoideum cDNA clone:ddv57m11, 5' ...  1158   0.0    1
(BJ423124) Dictyostelium discoideum cDNA clone:ddv48k02, 5' ...  1156   0.0    1
(BJ388217) Dictyostelium discoideum cDNA clone:dds8a16, 5' e...  1154   0.0    1
(BJ360053) Dictyostelium discoideum cDNA clone:ddc3p23, 5' e...  1126   0.0    1
(BJ422992) Dictyostelium discoideum cDNA clone:ddv47p13, 5' ...  1108   0.0    1
(BJ410819) Dictyostelium discoideum cDNA clone:ddv2a04, 5' e...  1108   0.0    1
(BJ335399) Dictyostelium discoideum cDNA clone:dda50f02, 5' ...  1104   0.0    1

Homology Contig-U13716-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


AY077634_1(AY077634|pid:none) Dictyostelium discoideum RNaseL in...   776   0.0
AK226939_1(AK226939|pid:none) Arabidopsis thaliana mRNA for RNas...   575   0.0
AB168951_1(AB168951|pid:none) Macaca fascicularis testis cDNA, c...   561   0.0
CR860497_1(CR860497|pid:none) Pongo abelii mRNA; cDNA DKFZp469K1...   561   0.0
(P61221) RecName: Full=ATP-binding cassette sub-family E member ...   561   0.0
AY450958_1(AY450958|pid:none) Cercopithecus aethiops RNase L inh...   560   0.0
AK167370_1(AK167370|pid:none) Mus musculus 15 days pregnant adul...   561   0.0
AK167704_1(AK167704|pid:none) Mus musculus 14 days embryo liver ...   558   0.0
AJ720308_1(AJ720308|pid:none) Gallus gallus mRNA for hypothetica...   559   0.0
BT044624_1(BT044624|pid:none) Salmo salar clone ssal-rgf-001-081...   550   0.0