Dictyostelium discoideum cDNA Contig-U13612-1

Assembled

Chromosomal Location of Contig-U13612-1

Sequence Contig-U13612-1

AAAAACTTTT TAATTTGTTG ATACTGATAT TCTAGTCGTA TTACAAAAGT
TATAAAAATG GTTGTTCCTG CTCAATCAAA AACAAAAACA ACACCAACAA
CTGTTGCAAA AGCAGCACCA GCTAAAATAG CAACAGCACC AACAACTGTT
GCTAAAGCAC CAACAACTAA ACCAAAAACA ACAACACCAC CACCAACAAA
AACAACAGTT GCAAAAGCAG CACCAGCTAA AGTATCAACA GCACCAACAA
CAACCAAACC AAAAACATCT GAAAAACCAA CAGAAAAGAA ACAAGATAAT
AAAAAACAAG ATAATAAGAA ACCAGAAATT AAGAAAAATG AAAATAATAA
TAAAAAACCA GAATATAAAA AACCAGAAAA TAAAAATAAT GGTAAATTTT
TAAATGATAA CAAAAAATCA TTTAATAAAG AAACAAAAGC AGAATCAAGT
AGAGATACAT TTTCAAAGAA ATTCTTTGGA AATAAAGATA AAAAAGAAAC
TACTACCACT GAACCAAAAA CATCATCATC ATCTTTCCAA AAAAGAGAAC
AACCATTTGA AAAGAAAGAA ACTACTCAAC CATATCAAAA AAAATTTGAA
ATTAAAAAAG ATAAATCAAC TACCACCGAA TCATCTAAA

Translated Amino Acid Sequence Contig-U13612-1

knflic*y*YSSRITKVIKMVVPAQSKTKTTPTTVAKAAPAKIATAPTTVAKAPTTKPKT
TTPPPTKTTVAKAAPAKVSTAPTTTKPKTSEKPTEKKQDNKKQDNKKPEIKKNENNNKKP
EYKKPENKNNGKFLNDNKKSFNKETKAESSRDTFSKKFFGNKDKKETTTTEPKTSSSSFQ
KREQPFEKKETTQPYQKKFEIKKDKSTTTESSK

Homology Contig-U13612-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13612-1 (Contig-U13612-1Q) /CSM_Contig/Conti...   394  e-110
Contig-U02712-1 (Contig-U02712-1Q) /CSM_Contig/Conti...    48  1e-05
Contig-U14907-1 (Contig-U14907-1Q) /CSM_Contig/Conti...    42  7e-04
Contig-U12231-1 (Contig-U12231-1Q) /CSM_Contig/Conti...    42  7e-04
Contig-U12044-1 (Contig-U12044-1Q) /CSM_Contig/Conti...    42  7e-04
Contig-U11821-1 (Contig-U11821-1Q) /CSM_Contig/Conti...    42  7e-04
Contig-U04450-1 (Contig-U04450-1Q) /CSM_Contig/Conti...    42  7e-04
Contig-U12392-1 (Contig-U12392-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U11272-1 (Contig-U11272-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U10369-1 (Contig-U10369-1Q) /CSM_Contig/Conti...    40  0.003

Homology Contig-U13612-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ420336) Dictyostelium discoideum cDNA clone:ddv38p23, 5' ...   293   e-160  4
(BJ420945) Dictyostelium discoideum cDNA clone:ddv40n24, 5' ...   293   e-127  3
(BJ425988) Dictyostelium discoideum cDNA clone:ddv57b19, 5' ...   258   e-123  3
(AC186837) Gallus gallus BAC clone CH261-79E12 from chromoso...    50   0.11   1
(AL671331) Mouse DNA sequence from clone RP23-126C18 on chro...    50   0.11   1
(FL881879) CCGN441.b1 CCGN Panicum virgatum etiolated seedli...    50   0.11   1
(AC008769) Homo sapiens chromosome 5 clone CTD-2006B8, compl...    42   0.15   4
(EB324296) CNSN01-F-102315-501 Normalized CNS library (juven...    38   0.17   2
(ED767032) GM_WBb0140G05.f GM_WBb Glycine max genomic clone ...    40   0.22   2
(AC130529) Mus musculus BAC clone RP23-124O11 from chromosom...    44   0.23   2

Homology Contig-U13612-1 vs Protein