<Clone: Contig-U13603-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Contig-U13603-1
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Assembled
Chromosomal Location of Contig-U13603-1
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more Chromosomal info
>
| Chromosome Number |
6 |
| Length |
3595308 |
| Start Poin |
2,326,526 |
| End Point |
2,326,011 |
| Strand |
MINUS |
Sequence Contig-U13603-1
GAAAAAACGA ATAAAAAAAA AAGGAATGAT ATCATTAAAT AATTCTTTTT
TTAACAAAAG AGTTATAGTT AATTCATTTA ATAATTATAA AAGATCATTT
GGAACAAAAT CACAAAATGA AGAATCAGCA ATAGTAGATT CAAATCATTC
ATTTGCTCAT ACATTAAATT TACCAAAAAC TACATTTTCA ATGAAAGCAA
ATGCAGCAAC AAGAGAACCA ACATTATTAA AAGATCCATA TAAACTCTAT
AAATGGCAAT TAGAAAATAA TAAAGGNGAA AATTGGGTAT TTCATGATGG
ACCACCATAT GCAAATGGNG ATTTACATAT GGGACATGCA TTAAATAAAA
TTTTAAAAGA TATTGTTAAT AGATATAAAG TTTTAAAAGG ATTTAAAGTT
AATTATATTC CAGGTTGGGA TTGTCATGGT TTACCAATTG AACAACAAGC
TTTTAANAAA TTAAAGAAAT CATCTGATAT GAAAGCCTCA GATATTANAA
AGATAGCAGG TGATTTTGCA AGAAAAGAGA TTGAAAAACA ATCAAAAG
Translated Amino Acid Sequence Contig-U13603-1
<All Frames>
KKRIKKKGMISLNNSFFNKRVIVNSFNNYKRSFGTKSQNEESAIVDSNHSFAHTLNLPKT
TFSMKANAATREPTLLKDPYKLYKWQLENNKGENWVFHDGPPYANGDLHMGHALNKILKD
IVNRYKVLKGFKVNYIPGWDCHGLPIEQQAFXKLKKSSDMKASDIXKIAGDFARKEIEKQ
SK
Homology Contig-U13603-1 vs CSM-Contig
<more CONTIG info>
Sequences producing significant alignments: (bits) Value
Contig-U13603-1 (Contig-U13603-1Q) /CSM_Contig/Conti... 977 0.0
Contig-U11156-1 (Contig-U11156-1Q) /CSM_Contig/Conti... 52 6e-07
Contig-U12577-1 (Contig-U12577-1Q) /CSM_Contig/Conti... 38 0.010
Contig-U11805-1 (Contig-U11805-1Q) /CSM_Contig/Conti... 38 0.010
Contig-U06431-1 (Contig-U06431-1Q) /CSM_Contig/Conti... 38 0.010
Contig-U06247-1 (Contig-U06247-1Q) /CSM_Contig/Conti... 38 0.010
Contig-U11733-1 (Contig-U11733-1Q) /CSM_Contig/Conti... 36 0.038
Contig-U09421-1 (Contig-U09421-1Q) /CSM_Contig/Conti... 36 0.038
Contig-U04795-1 (Contig-U04795-1Q) /CSM_Contig/Conti... 36 0.038
Contig-U04465-1 (Contig-U04465-1Q) /CSM_Contig/Conti... 36 0.038
Homology Contig-U13603-1 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(BJ421768) Dictyostelium discoideum cDNA clone:ddv43d21, 5' ... 557 0.0 3
(BJ420089) Dictyostelium discoideum cDNA clone:ddv38o04, 5' ... 545 0.0 3
(BJ421703) Dictyostelium discoideum cDNA clone:ddv43f14, 5' ... 545 0.0 3
(EK209906) 1095460095191 Global-Ocean-Sampling_GS-31-01-01-1... 68 2e-15 2
(ER576287) 1093015813112 Global-Ocean-Sampling_GS-36-01-01-2... 50 2e-14 4
(EA074561) Sequence 1919 from patent US 7183083. 64 3e-14 2
(GC558283) Sequence 1994 from patent US 7416862. 64 3e-14 2
(AR888258) Sequence 1919 from patent US 7060458. 64 3e-14 2
(EK471122) 1095469453790 Global-Ocean-Sampling_GS-32-01-01-1... 60 3e-13 3
(EJ130791) 1092343496786 Global-Ocean-Sampling_GS-27-01-01-1... 54 3e-13 3
Homology Contig-U13603-1 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q54CE4) RecName: Full=Probable isoleucyl-tRNA synthetase, mitoc... 357 1e-97
(A8G2P6) RecName: Full=Isoleucyl-tRNA synthetase; EC=6.... 149 4e-35
CP000393_3137(CP000393|pid:none) Trichodesmium erythraeum IMS101... 147 2e-34
(B0C872) RecName: Full=Isoleucyl-tRNA synthetase; EC=6.... 146 3e-34
CP000806_4541(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 145 9e-34
BA000039_2329(BA000039|pid:none) Thermosynechococcus elongatus B... 144 1e-33
CP000923_1842(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 144 1e-33
(Q8DGI7) RecName: Full=Isoleucyl-tRNA synthetase; EC=6.... 144 1e-33
CP000117_3753(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 143 3e-33
AY080830_1(AY080830|pid:none) Arabidopsis thaliana putative isol... 143 3e-33
<Clone: Contig-U13603-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home