Dictyostelium discoideum cDNA Contig-U13582-1

Assembled

Chromosomal Location of Contig-U13582-1

Sequence Contig-U13582-1

GTTTTAAAAT CAATTAGACC TACCTATAAA GATAATATTT CAAAGGTTGT
TGATATCGCT CAATCATTAC ATCCACAATC TAAAAAATAT AAATTCATTT
TATTATTACT AAATAAAATT CAAGAACAAG GTTTAGTTTG TGATTTCGTT
GAACAATTTA AAAAATTATC ATCACTTGGT GGTAATTGTA TGGAAATCTC
TTTAAAAGCT AAACATATCA TGGTTCATTC TCAATTACCT TCAAATAAAC
AAAGATCAAA TGATTTAATT AATTCATTAA AATCAATTTT AAATGTAAAC
AATGAACAAC AACAACAAGT TGATGAAAAA GTTCAAGATA ATAAGGATGA
AAAAATTTCA AAATTATCAA AACAAACAAA TGAAATTAGT GATATTTTAA
TACCAATGTT TTTCAATGAA TCAAATAATG ATGATGATAT TCGCAAATTA
GCAATGGAAG TTTATGTACG TCATAGTTAT CGTTCCTATT ATGTTGAAGA
TACTAAAGTT ACACTATCAA ATGATGAAGG ATCAAGTGGA TTTTCATTCA
TTGAATGGCA TTTCTATATT AATTTACCAC AACAATCAAA TCTTGGTGGT
AGTAATAGTG GCTCACCAAC TTATGGTTCN NNNNNNNN

Translated Amino Acid Sequence Contig-U13582-1

VLKSIRPTYKDNISKVVDIAQSLHPQSKKYKFILLLLNKIQEQGLVCDFVEQFKKLSSLG
GNCMEISLKAKHIMVHSQLPSNKQRSNDLINSLKSILNVNNEQQQQVDEKVQDNKDEKIS
KLSKQTNEISDILIPMFFNESNNDDDIRKLAMEVYVRHSYRSYYVEDTKVTLSNDEGSSG
FSFIEWHFYINLPQQSNLGGSNSGSPTYGSXX

Homology Contig-U13582-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13582-1 (Contig-U13582-1Q) /CSM_Contig/Conti...  1247  0.0
Contig-U08910-1 (Contig-U08910-1Q) /CSM_Contig/Conti...    46  5e-05
Contig-U13975-1 (Contig-U13975-1Q) /CSM_Contig/Conti...    44  2e-04
Contig-U14192-1 (Contig-U14192-1Q) /CSM_Contig/Conti...    42  7e-04
Contig-U13927-1 (Contig-U13927-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U14852-1 (Contig-U14852-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U11869-1 (Contig-U11869-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U11451-1 (Contig-U11451-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U10142-1 (Contig-U10142-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U09597-1 (Contig-U09597-1Q) /CSM_Contig/Conti...    38  0.011

Homology Contig-U13582-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ419644) Dictyostelium discoideum cDNA clone:ddv36a24, 5' ...   644   0.0    2
(AC189439) Brassica rapa subsp. pekinensis clone KBrB069G15,...    44   0.003  3
(AC150240) Dasypus novemcinctus clone VMRC5-500C23, WORKING ...    38   0.004  6
(AE017263) Mesoplasma florum L1 complete genome.                   36   0.006  14
(EA374851) Sequence 87 from patent US 7314971.                     54   0.007  1
(AR898678) Sequence 87 from patent US 7071375.                     54   0.007  1
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g...    36   0.007  9
(L32150) Plasmodium falciparum carbamoyl phosphate synthetas...    46   0.007  3
(AR065855) Sequence 1 from patent US 5849573.                      46   0.011  3
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    40   0.025  14

Homology Contig-U13582-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54J08) RecName: Full=Acetyl-CoA carboxylase;          EC=6.4.1...   320   2e-86
FM992695_65(FM992695|pid:none) Candida dubliniensis CD36 chromos...    45   0.002
EF397565_1(EF397565|pid:none) Amylomyces rouxii acetyl-CoA carbo...    42   0.011
AM989989_6(AM989989|pid:none) Zygosaccharomyces rouxii strain CB...    39   0.13
FN392319_1023(FN392319|pid:none) Pichia pastoris GS115 chromosom...    37   0.48
L48995_1(L48995|pid:none) Glycine max acetyl coenzyme A carboxyl...    35   1.4
D78169_1(D78169|pid:none) Schizosaccharomyces pombe DNA for acet...    35   1.4
AF513383_1(AF513383|pid:none) Oryza sativa (japonica cultivar-gr...    35   1.8
AP008208_709(AP008208|pid:none) Oryza sativa (japonica cultivar-...    35   1.8
CR382134_250(CR382134|pid:none) Debaryomyces hansenii strain CBS...    35   2.4