Dictyostelium discoideum cDNA Contig-U13557-1

Assembled

Chromosomal Location of Contig-U13557-1

NO HIT FOUND.

Sequence Contig-U13557-1

---------- GNGTTTTTTN TTGTTTANTG CAANTAANTT TTGGNANTGN
GTTGGGNNCG AAATTTTCAA AGGTAGTCAN GCCAGTAAAA NACGAANTTT
TACCTGTAAN TTTCCCTGAN TGGGTAANGT TTATTGTAAN TCCGTTNGNT
GCCNTTACAT TTGGTGTTCA ANTAAAANTT CANTGGAAAN AANTTTGGGN
TATCATCATC GNTAGTTACA TTGGNGTAAC CGTTGGTAAN TGGGGTANTA
AANATTTTGG TGANGNTGGN GCTTTNTTTG GNTCANCTGC AATTTGNGCT
TTAGGTAACC NTTACTCAAN ANTAACAAAT ANTTTTGCGG TNGTTCCNAN
TANGGCGGGN ATTATTTTAN TGGNTCCNGG TAGNANGGGT GTTAAAGGNA
TCGTTTCAAT CAGTGANGGT GANATTTCCN GANGAATTGA TTTCNTTGGT
GGNANGTTTA NGACTGCNGC AANTTTAACN ATGGGTTTAN TGGNTGCNA

Translated Amino Acid Sequence Contig-U13557-1

XXXXVFXCLXQXXFGXXLGXKFSKVVXPVKXEXLPVXFPXWVXFIVXPXXAXTFGVQXKX
XWKXXWXIIIXSYIGVTVGXWGXKXFGXXGAXFGSXAIXALGNXYSXXTNXFAVVPXXAG
IILXXPGXXGVKGIVSISXGXISXXIDFXGGXFXTAAXLTMGLXXA

Homology Contig-U13557-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13557-1 (Contig-U13557-1Q) /CSM_Contig/Conti...   575  e-164
Contig-U04638-1 (Contig-U04638-1Q) /CSM_Contig/Conti...    32  0.54
Contig-U13949-1 (Contig-U13949-1Q) /CSM_Contig/Conti...    28  8.4
Contig-U11749-1 (Contig-U11749-1Q) /CSM_Contig/Conti...    28  8.4
Contig-U11478-1 (Contig-U11478-1Q) /CSM_Contig/Conti...    28  8.4
Contig-U11146-1 (Contig-U11146-1Q) /CSM_Contig/Conti...    28  8.4
Contig-U10804-1 (Contig-U10804-1Q) /CSM_Contig/Conti...    28  8.4
Contig-U10043-1 (Contig-U10043-1Q) /CSM_Contig/Conti...    28  8.4
Contig-U09782-1 (Contig-U09782-1Q) /CSM_Contig/Conti...    28  8.4

Homology Contig-U13557-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ437352) Dictyostelium discoideum cDNA clone:ddv34b01, 3' ...   573   e-159  1
(AU034130) Dictyostelium discoideum slug cDNA, clone SLB778.      517   e-142  1
(BJ407614) Dictyostelium discoideum cDNA clone:dds43i06, 3' ...   513   e-141  1
(BJ445250) Dictyostelium discoideum cDNA clone:ddv58m20, 3' ...   500   e-137  1
(BJ407306) Dictyostelium discoideum cDNA clone:dds38k02, 3' ...   500   e-137  1
(BJ408333) Dictyostelium discoideum cDNA clone:dds45p11, 3' ...   498   e-136  1
(BJ408987) Dictyostelium discoideum cDNA clone:dds47k16, 3' ...   476   e-130  1
(BJ443199) Dictyostelium discoideum cDNA clone:ddv52o03, 3' ...   470   e-128  1
(C25557) Dictyostelium discoideum slug cDNA, clone SLA296.        444   e-120  1
(BJ352408) Dictyostelium discoideum cDNA clone:dda46l16, 3' ...   442   e-120  1

Homology Contig-U13557-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP000931_3992(CP000931|pid:none) Shewanella halifaxensis HAW-EB4...    39   0.052
CP000472_2031(CP000472|pid:none) Shewanella piezotolerans WP3, c...    36   0.58
AE014299_306(AE014299|pid:none) Shewanella oneidensis MR-1, comp...    32   6.4
CP000444_272(CP000444|pid:none) Shewanella sp. MR-7, complete ge...    32   6.4
CP000563_4021(CP000563|pid:none) Shewanella baltica OS155, compl...    32   6.4