Homology Contig-U13515-1 vs DNA
Query= Contig-U13515-1 (Contig-U13515-1Q) /CSM_Contig/Contig-U13515-1Q.Seq.d
(156 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ424974) Dictyostelium discoideum cDNA clone:ddv54p01, 5' ... 125 5e-25 1
(BJ424104) Dictyostelium discoideum cDNA clone:ddv51k10, 5' ... 125 5e-25 1
(BJ422746) Dictyostelium discoideum cDNA clone:ddv46m23, 5' ... 125 5e-25 1
(BJ422297) Dictyostelium discoideum cDNA clone:ddv45a17, 5' ... 125 5e-25 1
(BJ422275) Dictyostelium discoideum cDNA clone:ddv45m08, 5' ... 125 5e-25 1
(BJ416345) Dictyostelium discoideum cDNA clone:ddv25j22, 5' ... 94 2e-15 1
(AL590663) Human DNA sequence from clone RP11-11M11 on chrom... 48 0.095 1
(AC021845) Homo sapiens chromosome 6 clone RP11-16I2, WORKIN... 48 0.095 1
(AG778909) Macaca fuscata fuscata DNA, clone: MSB2-258P21_F,... 48 0.095 1
(AC150453) Callithrix jacchus clone CH259-240K18, WORKING DR... 38 0.22 2
(AC092624) Homo sapiens BAC clone RP11-261J9 from 2, complet... 38 0.31 2
(AC153457) Bos taurus clone CH240-17M12, WORKING DRAFT SEQUE... 44 0.57 2
(AC093242) Homo sapiens chromosome 5 clone RP11-105A16, WORK... 36 0.79 2
(AC093206) Homo sapiens chromosome 5 clone CTC-448D22, compl... 36 0.80 2
(AC008444) Homo sapiens chromosome 5 clone CTC-338N15, compl... 36 0.82 2
(Z68868) Human DNA sequence from clone RP1-3E10 on chromosom... 36 1.3 2
(AC094601) Rattus norvegicus clone CH230-3G3, WORKING DRAFT ... 44 1.5 1
(AC219534) Bos taurus clone CH240-330D2, WORKING DRAFT SEQUE... 44 1.5 1
(BM646894) 17000687323057 A.Gam.ad.cDNA1 Anopheles gambiae c... 44 1.5 1
(BM592488) 17000687438163 A.Gam.ad.cDNA.blood1 Anopheles gam... 44 1.5 1
(AC168594) Strongylocentrotus purpuratus clone R3-3065D10, W... 42 3.6 3
(AC147067) Homo sapiens BAC clone RP13-1016M1 from 4, comple... 42 5.8 1
(AC118283) Homo sapiens BAC clone RP11-1398P2 from 4, comple... 42 5.8 1
(AC109585) Homo sapiens chromosome 3 clone RP11-802J21, comp... 42 5.8 1
(AC096916) Homo sapiens chromosome 3 clone RP11-92I24, compl... 42 5.8 1
(AC131828) Rattus norvegicus clone CH230-497F14, WORKING DRA... 42 5.8 1
(AC110347) Rattus norvegicus clone CH230-64P11, WORKING DRAF... 42 5.8 1
(AC178870) Strongylocentrotus purpuratus clone R3-27B10, WOR... 42 5.8 1
(AC018543) Homo sapiens chromosome 3 clone RP11-75H12, WORKI... 42 5.8 1
(BH064364) RPCI-24-285E10.TV RPCI-24 Mus musculus genomic cl... 42 5.8 1
(FH659392) CHO_OF4140xg19r1.ab1 CHO_OF4 Nicotiana tabacum ge... 42 5.8 1
(FH659329) CHO_OF4140xg19f1.ab1 CHO_OF4 Nicotiana tabacum ge... 42 5.8 1
(ES285346) PT028H09.XT7 in vitro interaction, P. brassicae P... 42 5.8 1
(ES283092) PP046H08.XT7 non-sporulating culture of P. brassi... 42 5.8 1
(DV554968) DC05018H06 Panax ginseng cDNA library Panax ginse... 42 5.8 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 32 7.1 2
(AC193540) Pan troglodytes BAC clone CH251-241N3 from chromo... 36 7.6 2
>(BJ424974) Dictyostelium discoideum cDNA clone:ddv54p01, 5' end,
single read.
Length = 129
Score = 125 bits (63), Expect = 5e-25
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 84 gggtataacaccaataccatcaccatcattctattatagtatagtttgaaaactatacaa 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 gggtataacaccaataccatcaccatcattctattatagtatagtttgaaaactatacaa 116
Query: 144 aag 146
|||
Sbjct: 117 aag 119
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 70,127,612
Number of extensions: 4625846
Number of successful extensions: 1408506
Number of sequences better than 10.0: 37
Length of query: 156
Length of database: 106,710,029,556
Length adjustment: 22
Effective length of query: 134
Effective length of database: 104,320,828,632
Effective search space: 13978991036688
Effective search space used: 13978991036688
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
Dictyostelium discoideum cDNA Project Home