Dictyostelium discoideum cDNA Contig-U13381-1

Assembled

Chromosomal Location of Contig-U13381-1

Sequence Contig-U13381-1

AATAATTTAA ATTTATTTTG CAGTTTTTGG ACACTGAAAT TAAATTAGTA
TTTATTTTTA TTTTTTTATT TTTTTTTCCA TTTTATTTTT TTCTATACTC
TCTAAAAAAC TTTCAAAAGA TTTTTATTTT TTTTTTTTTT ACAATACTAT
AAACAAAACT CTAGATTATT AAAAATAAAA TAGAGATATT AATTATAAAA
AATTATTTTT TTTGTATATT TAAATTAATT AAATAATGTC ATCATCAATT
CATCCAGGTG ATAAACCCTC AACATCAAAT ACTGCAAATA TGAATGAACA
AGGTAAAAGA TTAAATGAAA CAGAGATTTC AAATGATGCA AAGAAATTAA
AGACAGATAT AGCAGATACA TCATCACATC TTGCACAAAA TACTAAAGAA
GCAACTGTCC ATGCATTGAA TGCAACAGCA GCAGCCATAA CTGGTGGAAT
GAACATGGTT AGTGAAACAT TACAACCTGT AATTGAAAAG ACTAAAGAGA
TGGGTACAAA TGCAGCTCAT GCAGTTGGTG AAGGTATTGA AACACTTAAA
GCTAAAACCG GTGAAATGAT GGGTACAGCC AAAGAGGTTG GTGACAAATG
TGCTCATTGG ACAACTGAAC AAACTCAAGC ATTTTGTGAT AAATGTACCG
AATTAGCCAA GAATGCTAAA CTCATGGCCA ACGATGCAAA GGAAACTACT
GAAAAGAAAG TTGAAGAAGG AAAAGAGAAA GCTGGTGAAC TAACTGAAGA
TGCCAAAAAG AAAGCAGCCG AACTCAACGA TGAAGCTAAA AAGAAAGCTG
AACACTTGGC CGAGGACACA AAGAAAGCCA CTGCTGAAAC CAAAGAAAAG
TTGGATGAAA CTGCCAAGAA ATGTGAACAT TGGACAGCTG AACAAAAAGA
AAACATATGT AACAAATGTT CTGAATTAGC TAAAGATGCA AATAAAACCA
AAGATCAATT AGCAGCAAAT GCAGAGAAAA CAGCTGAAAA TACCAAAGAA
AAGTTGGACG AAACCGCAAA GAAATGTGAA CATTGGACCG CTGAACAAAA
AGAAAACATA TGTAGCAAAT GTTCTGAATT AACCAAAGAT ACCAAAGAAG
CCGCTGACCA TGCCTCTGAA GCCGTTAAAG CATGCTGCTG ACAATCTAAA
TGATAAAGTT CAAAAGAAAG GTAGAGGTAG ACCAAAGAAA CATTAAACTA
TTTACAAATA ATTTAATCCT TCATTTTAAA AAAAAAAAAA AAAAAAAAAA
AAATTAAAAA ATTAAAAAAA ATAAAATAGA ATCTTTAATT TGTAAATAAA

Translated Amino Acid Sequence Contig-U13381-1

ii*iyfavfgh*n*isiyfyffiffsilffsilskklskdfyffffyntinktldy*k*n
rdinykklfflyi*in*IMSSSIHPGDKPSTSNTANMNEQGKRLNETEISNDAKKLKTDI
ADTSSHLAQNTKEATVHALNATAAAITGGMNMVSETLQPVIEKTKEMGTNAAHAVGEGIE
TLKAKTGEMMGTAKEVGDKCAHWTTEQTQAFCDKCTELAKNAKLMANDAKETTEKKVEEG
KEKAGELTEDAKKKAAELNDEAKKKAEHLAEDTKKATAETKEKLDETAKKCEHWTAEQKE
NICNKCSELAKDANKTKDQLAANAEKTAENTKEKLDETAKKCEHWTAEQKENICSKCSEL
TKDTKEAADHASEAVKACC*qsk**ssker*r*tketlnylqii*sfilkkkkkkkkikk
lkkik*nl*fvnk

Homology Contig-U13381-1 vs CSM-Contig

Sequences producing significant alignments:                        (bits)  Value


Contig-U13381-1 (Contig-U13381-1Q) /CSM_Contig/Conti...  2010  0.0
Contig-U10748-1 (Contig-U10748-1Q) /CSM_Contig/Conti...   708  0.0
Contig-U06577-1 (Contig-U06577-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U11313-1 (Contig-U11313-1Q) /CSM_Contig/Conti...    38  0.023
Contig-U08437-1 (Contig-U08437-1Q) /CSM_Contig/Conti...    38  0.023
Contig-U13970-1 (Contig-U13970-1Q) /CSM_Contig/Conti...    36  0.092
Contig-U12902-1 (Contig-U12902-1Q) /CSM_Contig/Conti...    36  0.092
Contig-U12457-1 (Contig-U12457-1Q) /CSM_Contig/Conti...    36  0.092
Contig-U08718-1 (Contig-U08718-1Q) /CSM_Contig/Conti...    36  0.092
Contig-U13206-1 (Contig-U13206-1Q) /CSM_Contig/Conti...    32  1.4

Homology Contig-U13381-1 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AY044086) Dictyostelium discoideum Rho GDP-dissociation inh...   767   0.0    4
(BJ376253) Dictyostelium discoideum cDNA clone:ddc21c22, 3' ...   726   0.0    3
(BJ373368) Dictyostelium discoideum cDNA clone:ddc2d06, 3' e...   720   0.0    4
(BJ402618) Dictyostelium discoideum cDNA clone:dds17c15, 3' ...   714   0.0    3
(BJ402249) Dictyostelium discoideum cDNA clone:dds20p21, 3' ...   724   0.0    2
(AU060854) Dictyostelium discoideum slug cDNA, clone SLB754.      726   0.0    3
(BJ400806) Dictyostelium discoideum cDNA clone:dds14m19, 3' ...   720   0.0    5
(BJ373326) Dictyostelium discoideum cDNA clone:ddc2g21, 3' e...   718   0.0    5
(AU061950) Dictyostelium discoideum slug cDNA, clone SLG755.      801   0.0    2
(BJ390037) Dictyostelium discoideum cDNA clone:dds20p21, 5' ...   940   0.0    2

Homology Contig-U13381-1 vs Protein

Sequences producing significant alignments:                      (bits) Value


Z73975_1(Z73975|pid:none) Caenorhabditis elegans Cosmid T06E8, c...    57   1e-06
Z73975_2(Z73975|pid:none) Caenorhabditis elegans Cosmid T06E8, c...    57   1e-06
DQ196430_1(DQ196430|pid:none) Phaseolus vulgaris group 3 late em...    57   2e-06
AC117076_42(AC117076|pid:none) Dictyostelium discoideum chromoso...    54   1e-05
AK318845_1(AK318845|pid:none) Arabidopsis thaliana AT3G53040 mRN...    52   6e-05
AL132969_20(AL132969|pid:none) Arabidopsis thaliana DNA chromoso...    52   6e-05
S39475(S39475;S28385) embryonic protein BP8 - European white bir...    47   0.001
(Q08695) Axoneme-associated protein mst101(1).  &S34153(S34153) ...    46   0.003
EU665182_1(EU665182|pid:none) Medicago sativa group 3 LEA protei...    46   0.003
(Q03968) RecName: Full=Late embryogenesis abundant protein, grou...    45   0.006