<Clone: Contig-U13257-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Contig-U13257-1
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Assembled
Chromosomal Location of Contig-U13257-1
<
more Chromosomal info
>
| Chromosome Number |
5 |
| Length |
5062330 |
| Start Poin |
1,279,432 |
| End Point |
1,279,951 |
| Strand |
PLUS |
Sequence Contig-U13257-1
CATAAAAAAC AAATTGAATT AACTCATGCT TGTACAGTTG GTGATGTAAA
TTATTTAGAT CAAATTATTT TATCTGGTGT TTCAACAGAT CAATTAAAAG
AAGCACATAA AGCAGGACAT GCAATTGTAT TTGATTCATT ATTAACACAT
AATAGTAATT CATTAGTTGT TACAGGTACA ATGGCATTAT TAGGAGCGAT
TGTAGAGAAT GGAGATAGAA AAGGTAAACG TTTATCATTA TCAAGATCGA
ATTTATCTAG ATTCCCAATG TCGATAACAC AAATGTGTAC TCATTTGGTT
GAGTTAGATT TAAGTGATAA TAAAATCACC GAATTACCAA AGGATATCCA
ATTGTTAAAG TCTTTGAGAA TTTTAATTTT ACGTGGTAAT CTATTGGAAG
ATATACCATT GGAGATTTGT TATTTAGGAG ATTTAAAGAT TTTAGAGTTA
CAAGAAAATC CATTGAATAA TTTCCCATTG AGTGTTGTTC AAAGTGGTAC
AAAGAATCTT TTATTATTTT GTAAGAATAT ATTGGAGCGT AAAAAGAGTG
AAACTTGGAA TAAGGTCAAG TTGATGTTTG TTGGNNNNNN NNN
Translated Amino Acid Sequence Contig-U13257-1
<All Frames>
HKKQIELTHACTVGDVNYLDQIILSGVSTDQLKEAHKAGHAIVFDSLLTHNSNSLVVTGT
MALLGAIVENGDRKGKRLSLSRSNLSRFPMSITQMCTHLVELDLSDNKITELPKDIQLLK
SLRILILRGNLLEDIPLEICYLGDLKILELQENPLNNFPLSVVQSGTKNLLLFCKNILER
KKSETWNKVKLMFVGXX
Homology Contig-U13257-1 vs CSM-Contig
<more CONTIG info>
Sequences producing significant alignments: (bits) Value
Contig-U13257-1 (Contig-U13257-1Q) /CSM_Contig/Conti... 1158 0.0
Contig-U11510-1 (Contig-U11510-1Q) /CSM_Contig/Conti... 38 0.010
Contig-U14562-1 (Contig-U14562-1Q) /CSM_Contig/Conti... 36 0.041
Contig-U12521-1 (Contig-U12521-1Q) /CSM_Contig/Conti... 36 0.041
Contig-U09155-1 (Contig-U09155-1Q) /CSM_Contig/Conti... 36 0.041
Contig-U14865-1 (Contig-U14865-1Q) /CSM_Contig/Conti... 34 0.16
Contig-U12107-1 (Contig-U12107-1Q) /CSM_Contig/Conti... 34 0.16
Contig-U11755-1 (Contig-U11755-1Q) /CSM_Contig/Conti... 34 0.16
Contig-U11710-1 (Contig-U11710-1Q) /CSM_Contig/Conti... 34 0.16
Contig-U09271-1 (Contig-U09271-1Q) /CSM_Contig/Conti... 34 0.16
Homology Contig-U13257-1 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
(BJ394221) Dictyostelium discoideum cDNA clone:dds34e12, 5' ... 1154 0.0 1
(AY232266) Dictyostelium discoideum putative protein Roco4 (... 981 0.0 2
(GR567342) CBTF3032.g1 CBTF Dictyostelium purpureum 12 hr ve... 258 6e-72 2
(AY232265) Dictyostelium discoideum putative protein Roco2 (... 64 3e-23 6
(AY232273) Dictyostelium discoideum putative protein Roco11 ... 62 2e-09 3
(EK232462) 1095460184468 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.026 1
(EK147369) 1095456028255 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.026 1
(EJ121917) 1092343376738 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.10 1
(DT250713) JGI_CAAU4411.rev CAAU Pimephales promelas brain 7... 50 0.10 1
(EY268254) BF01043A1F01.f1 Normalized subtracted keck librar... 46 0.22 2
Homology Contig-U13257-1 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(Q6XHB2) RecName: Full=Probable serine/threonine-protein kinase ... 361 9e-99
(Q8SSS9) RecName: Full=Probable serine/threonine-protein kinase ... 213 2e-54
(Q6XHA5) RecName: Full=Probable serine/threonine-protein kinase ... 202 7e-51
CP000099_2371(CP000099|pid:none) Methanosarcina barkeri str. Fus... 61 3e-08
FN357312_61(FN357312|pid:none) Schistosoma mansoni genome sequen... 60 3e-08
CP001329_1(CP001329|pid:none) Micromonas sp. RCC299 chromosome 9... 60 4e-08
CP001576_117(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 60 6e-08
(A2Q9L0) RecName: Full=Glucose-repressible alcohol dehydrogenase... 59 8e-08
AE010300_873(AE010300|pid:none) Leptospira interrogans serovar l... 59 1e-07
CP001332_194(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 59 1e-07
<Clone: Contig-U13257-1> <SEQ> <Translated> <CONTIG> <DNA> <Protein> <PSORT> <MOTIF>
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