Homology Contig-U13206-1 vs DNA
Query= Contig-U13206-1 (Contig-U13206-1Q) /CSM_Contig/Contig-U13206-1Q.Seq.d
(360 letters)
Database: ddbj_A
108,600,042 sequences; 106,710,029,556 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(BJ403079) Dictyostelium discoideum cDNA clone:dds24a04, 3' ... 333 e-142 2
(GH602018) G1297P539RM9.T0 C. parvum KSU-1 normalized sporoz... 36 0.013 2
(AL401018) T3 end of clone AS0AA025C02 of library AS0AA from... 50 0.060 1
(AC225188) Zea mays chromosome 2 clone CH201-154E17; ZMMBBc0... 36 0.23 4
(EL425128) CHCM4663.b1_M13.ab1 CHC(LMS) Texas blueweed Helia... 36 0.23 2
(EH783890) CNSS23124.b1_G21.ab1 CNS(LMS) yellow starthistle ... 48 0.24 1
(AC204633) Zea mays chromosome 6 clone CH201-22K15; ZMMBBc00... 38 0.44 3
(AB018543) Dictyostelium discoideum mkpA gene, complete cds. 36 0.49 3
(AC180017) Strongylocentrotus purpuratus clone R3-23H22, WOR... 36 0.52 2
(AC201606) Strongylocentrotus purpuratus clone R3-55P10, WOR... 36 0.53 2
(AP006428) Lotus japonicus genomic DNA, chromosome 5, clone:... 34 0.53 2
(EY528853) CAPF5328.rev CAPF Capitella sp. I ECS-2004 whole ... 34 0.78 2
(AC231815) Oryza minuta clone OM__Ba0073C01, complete sequence. 46 0.94 1
(AB033500) Plautia stali Vg-3 mRNA for vitellogenin-3, compl... 46 0.94 1
(AC231806) Oryza minuta clone OM__Ba0139F10, *** SEQUENCING ... 46 0.94 1
(FI073440) CHO_OF7327xn24r1.ab1 CHO_OF7 Nicotiana tabacum ge... 46 0.94 1
(FH056091) CHO_OF3479xj24f1.ab1 CHO_OF3 Nicotiana tabacum ge... 46 0.94 1
(DW999638) BNDH4DCT_UP_002_E02_17DEC2004_008 Brassica napus ... 46 0.94 1
(CT761795) Paramecium tetraurelia 5-PRIME EST from clone LK0... 46 0.94 1
(FG290350) 1108793316685 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG290310) 1108793316633 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG290282) 1108793315522 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG290117) 1108793314477 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG289847) 1108793308020 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG289118) 1108793292362 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG289048) 1108793291864 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG288786) 1108793276301 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG288425) 1108793270227 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG287967) 1108793257783 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG287532) 1108770740844 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG286765) 1108770726077 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG285826) 1108770704007 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG285434) 1108770701342 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG285375) 1108770700945 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG284978) 1108770690091 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG284910) 1108770687592 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG283987) 1108770645218 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG283789) 1108770637105 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG283529) 1108770623890 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG282880) 1108383360906 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FG282711) 1108383360618 New World Screwworm Egg 9261 ESTs C... 46 0.94 1
(FE966335) PLATE_T3_026_C12_02DEC2004_092 Opium poppy elicit... 46 0.94 1
(EY324862) CAWY10554.fwd CAWY Helobdella robusta Subtracted ... 46 0.94 1
(EY301497) CAWX15611.fwd CAWX Helobdella robusta Primary Ear... 46 0.94 1
(DQ121376) Uncultured bacterium clone YC01G10, partial seque... 46 0.94 1
(BA000028) Oceanobacillus iheyensis HTE831 DNA, complete gen... 46 0.94 1
(U23477) Dictyostelium discoideum phosphatidylinositol-4,5-d... 36 1.8 2
(AC180873) Strongylocentrotus purpuratus clone R3-3067L20, W... 34 1.9 2
(AC102918) Mus musculus chromosome 7, clone RP24-273E13, com... 38 2.2 2
(AC234171) Zea mays chromosome 6 clone CH201-320H6; ZMMBBc03... 36 2.3 4
(AC177755) Strongylocentrotus purpuratus clone R3-1005O14, W... 38 2.4 2
(EJ704525) 1092956048725 Global-Ocean-Sampling_GS-30-02-01-1... 32 2.5 2
(EL428367) CHCM7649.b1_B18.ab1 CHC(LMS) Texas blueweed Helia... 34 2.5 2
(AC217508) Zea mays chromosome 3 clone CH201-307C8; ZMMBBc03... 40 2.7 2
(CU570668) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 3.2 2
(Y17350) Laminaria digitata simple tandem repeat DNA, Ld2-167. 44 3.7 1
(AP007164) Aspergillus oryzae RIB40 DNA, SC111. 44 3.7 1
(AM464839) Vitis vinifera contig VV78X198911.7, whole genome... 44 3.7 1
(AR545008) Sequence 139 from patent US 6747137. 44 3.7 1
(DQ826485) Echinococcus multilocularis clone EmAgB2_w1_35 no... 44 3.7 1
(AC225404) Echinops telfairi clone CH238-65B6, WORKING DRAFT... 44 3.7 1
(AC217738) Peromyscus maniculatus rufinus clone CH233-545A13... 44 3.7 1
(AC217597) Echinops telfairi clone CH238-434G3, WORKING DRAF... 44 3.7 1
(AC215556) Echinops telfairi clone CH238-29O8, WORKING DRAFT... 44 3.7 1
(AC202588) Medicago truncatula clone mth2-45g3, WORKING DRAF... 44 3.7 1
(AC202319) Medicago truncatula clone mth2-151a7, WORKING DRA... 44 3.7 1
(AC187664) Echinops telfairi clone CH238-214N8, WORKING DRAF... 44 3.7 1
(AM643048) Entamoeba dispar GSS, clone dispar9h06.p1k. 44 3.7 1
(AM637973) Entamoeba dispar GSS, clone dispar49b05.q1k. 44 3.7 1
(AM632483) Entamoeba dispar GSS, clone dispar87h12.p1k. 44 3.7 1
(AM626318) Entamoeba dispar GSS, clone dispar127d03.q1k. 44 3.7 1
(AM623902) Entamoeba dispar GSS, clone dispar104h02.q1k. 44 3.7 1
(CZ834241) OC__Ba0217A17.r OC__Ba Oryza coarctata genomic cl... 44 3.7 1
(EB604845) AGENCOURT_54970149 D. mojavensis EST Drosophila m... 44 3.7 1
(EB316018) CNSN01-F-081637-501 Normalized CNS library (juven... 44 3.7 1
(AU073596) Dictyostelium discoideum slug cDNA, clone SSH630. 44 3.7 1
(AU061064) Dictyostelium discoideum slug cDNA, clone SLC789. 44 3.7 1
(BJ370711) Dictyostelium discoideum cDNA clone:ddc55i03, 5' ... 44 3.7 1
(GR722460) MLN2_2482 Brassica rapa mature lateral nectary, n... 44 3.7 1
(GR570258) CBTG1069.g4 CBTG Dictyostelium purpureum 12 hr ve... 44 3.7 1
(GR569283) CBTF4473.g1 CBTF Dictyostelium purpureum 12 hr ve... 44 3.7 1
(GO970483) CCIH7056.g1 CCIH Mimulus nasutus SF floral buds (... 44 3.7 1
(GO970482) CCIH7056.b1 CCIH Mimulus nasutus SF floral buds (... 44 3.7 1
(FD570327) RS2FD09TF RS2(RS) Raphanus sativus cDNA 5', mRNA ... 44 3.7 1
(EY357705) CAWZ5393.fwd CAWZ Helobdella robusta Primary Late... 44 3.7 1
(EY357704) CAWZ5393.rev CAWZ Helobdella robusta Primary Late... 44 3.7 1
(EY357675) CAWZ5377.fwd CAWZ Helobdella robusta Primary Late... 44 3.7 1
(EY324262) CAWX9839.rev CAWX Helobdella robusta Primary Earl... 44 3.7 1
(EY312266) CAWX23921.fwd CAWX Helobdella robusta Primary Ear... 44 3.7 1
(EY305573) CAWX19444.fwd CAWX Helobdella robusta Primary Ear... 44 3.7 1
(EY294480) CAWX11706.fwd CAWX Helobdella robusta Primary Ear... 44 3.7 1
(EY294479) CAWX11706.rev CAWX Helobdella robusta Primary Ear... 44 3.7 1
(EX523363) ALF-R-11_2007-07-21_1/ALF(R)-11_B01_008_1 Alfalfa... 44 3.7 1
(EL495458) E09_PFBAMHI-L-T7-PLATE1A.AB1 Blood stage Plasmodi... 38 4.1 2
(DW104506) CLRX2313.b1_A03.ab1 CLR(XYZ) lettuce serriola Lac... 34 4.3 2
(AC208919) Zea mays chromosome 1 clone CH201-310B18; ZMMBBc0... 36 5.0 3
(AC218167) Zea mays chromosome 7 clone CH201-70F22; ZMMBBc00... 34 5.9 4
(AC235863) Glycine max strain Williams 82 clone GM_WBb0105E2... 34 6.1 3
(AL954835) Mouse DNA sequence from clone RP23-416L9 on chrom... 38 6.2 4
(AC202318) Medicago truncatula clone mth2-150o9, WORKING DRA... 32 7.0 2
(EL423603) CHCM3186.b1_D05.ab1 CHC(LMS) Texas blueweed Helia... 32 9.3 2
(EE606316) CHWL1264.b1_P03.ab1 CHW(LMS) silverleaf sunflower... 30 9.3 2
(EL429983) CHCM9126.b1_L02.ab1 CHC(LMS) Texas blueweed Helia... 32 9.3 2
(EL427434) CHCM6795.b1_E20.ab1 CHC(LMS) Texas blueweed Helia... 32 9.3 2
(CR350768) mte1-85N8FM1 BAC end, cultivar Jemalong A17 of Me... 32 9.3 2
(EA365157) Sequence 8 from patent US 7309815. 30 9.4 2
(EA365608) Sequence 459 from patent US 7309815. 30 9.4 2
(EL425260) CHCM4786.b1_D21.ab1 CHC(LMS) Texas blueweed Helia... 32 9.5 2
(AJ615507) Triticum turgidum EST, clone 11746R. 30 9.9 2
>(BJ403079) Dictyostelium discoideum cDNA clone:dds24a04, 3' end,
single read.
Length = 351
Score = 333 bits (168), Expect(2) = e-142
Identities = 180/180 (100%)
Strand = Plus / Minus
Query: 181 tatcatctgcaatnacaacttcaagcgcaatagcaaattcaaattccagttcatcatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatcatctgcaatnacaacttcaagcgcaatagcaaattcaaattccagttcatcatcat 122
Query: 241 cttcttnttcaccaaattcttcaccaacatcttcaccaacatggacaactgcaactacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttcttnttcaccaaattcttcaccaacatcttcaccaacatggacaactgcaactacaa 62
Query: 301 ctacaaatatncaattacttacacaacatgaagaaatgaaaaagataanaataataatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctacaaatatncaattacttacacaacatgaagaaatgaaaaagataanaataataatag 2
Score = 208 bits (105), Expect(2) = e-142
Identities = 114/114 (100%)
Strand = Plus / Minus
Query: 14 ccgttatcatcntcaccncaaccttcaataccttcaccancaatgtctcatagaaaaagg 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ccgttatcatcntcaccncaaccttcaataccttcaccancaatgtctcatagaaaaagg 289
Query: 74 tcaacaagtggtggtagtccaagacctcattctccagtctagtacttcaccaag 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tcaacaagtggtggtagtccaagacctcattctccagtctagtacttcaccaag 235
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 108600042
Number of Hits to DB: 329,374,702
Number of extensions: 22946169
Number of successful extensions: 1891850
Number of sequences better than 10.0: 110
Length of query: 360
Length of database: 106,710,029,556
Length adjustment: 23
Effective length of query: 337
Effective length of database: 104,212,228,590
Effective search space: 35119521034830
Effective search space used: 35119521034830
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
Dictyostelium discoideum cDNA Project Home